RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 OR2B8PP59922 312 aa13.62□□□□□ -0.23
CHMP2A-203ENST00000597209 NCS1P62166 190 aa13.62□□□□□ -0.23
CHMP2A-203ENST00000597209 AADACL3Q5VUY0 350 aa13.62□□□□□ -0.23
CHMP2A-203ENST00000597209 LYSMD2Q8IV50 215 aa13.62□□□□□ -0.23
CHMP2A-203ENST00000597209 OR51H1Q8NH63 302 aa13.62□□□□□ -0.23
CHMP2A-203ENST00000597209 GPX8Q8TED1 209 aa13.62□□□□□ -0.23
CHMP2A-203ENST00000597209 THAP7Q9BT49 309 aaPredicted RBP13.62□□□□□ -0.23
CHMP2A-203ENST00000597209 SMIM31A0A1B0GVY4 71 aa13.61□□□□□ -0.23
CHMP2A-203ENST00000597209 LGALS9O00182 355 aa13.61□□□□□ -0.23
CHMP2A-203ENST00000597209 PGLYRP1O75594 196 aaPredicted RBP13.61□□□□□ -0.23
CHMP2A-203ENST00000597209 S1PR2O95136 353 aa13.61□□□□□ -0.23
CHMP2A-203ENST00000597209 NDUFB8O95169 186 aa13.61□□□□□ -0.23
CHMP2A-203ENST00000597209 MYOD1P15172 320 aa13.61□□□□□ -0.23
CHMP2A-203ENST00000597209 F2RP25116 425 aa13.61□□□□□ -0.23
CHMP2A-203ENST00000597209 VBP1P61758 197 aa13.61□□□□□ -0.23
CHMP2A-203ENST00000597209 THOC7Q6I9Y2 204 aaKnown RBP13.61□□□□□ -0.23
CHMP2A-203ENST00000597209 C19orf35Q6ZS72 473 aa13.61□□□□□ -0.23
CHMP2A-203ENST00000597209 OR6F1Q8NGZ6 308 aa13.61□□□□□ -0.23
CHMP2A-203ENST00000597209 RCHY1Q96PM5 261 aa13.61□□□□□ -0.23
CHMP2A-203ENST00000597209 ZMAT4Q9H898 229 aa13.61□□□□□ -0.23
CHMP2A-203ENST00000597209 SCPEP1Q9HB40 452 aa13.61□□□□□ -0.23
CHMP2A-203ENST00000597209 TMEM140Q9NV12 185 aa13.61□□□□□ -0.23
CHMP2A-203ENST00000597209 COMMD3Q9UBI1 195 aa13.61□□□□□ -0.23
CHMP2A-203ENST00000597209 IGLV11-55A0A075B6I3 123 aa13.6□□□□□ -0.23
CHMP2A-203ENST00000597209 TRAV3A0A0B4J244 114 aa13.6□□□□□ -0.23
CHMP2A-203ENST00000597209 ADAMTSL5Q6ZMM2 481 aa13.6□□□□□ -0.23
CHMP2A-203ENST00000597209 GPHB5Q86YW7 130 aa13.6□□□□□ -0.23
CHMP2A-203ENST00000597209 CMTM1Q8IZ96 169 aa13.6□□□□□ -0.23
CHMP2A-203ENST00000597209 DMBX1Q8NFW5 382 aa13.6□□□□□ -0.23
CHMP2A-203ENST00000597209 EEF1AKMT3Q96AZ1 226 aa13.6□□□□□ -0.23
CHMP2A-203ENST00000597209 CCDC140Q96MF4 163 aa13.6□□□□□ -0.23
CHMP2A-203ENST00000597209 TM2D3Q9BRN9 247 aa13.6□□□□□ -0.23
CHMP2A-203ENST00000597209 COMMD5Q9GZQ3 224 aa13.6□□□□□ -0.23
CHMP2A-203ENST00000597209 IGLC7A0M8Q6 106 aa13.59□□□□□ -0.23
CHMP2A-203ENST00000597209 PPP5D1E7EU14 171 aa13.59□□□□□ -0.23
CHMP2A-203ENST00000597209 C3orf84H3BNL1 204 aa13.59□□□□□ -0.23
CHMP2A-203ENST00000597209 GPR31O00270 319 aa13.59□□□□□ -0.23
CHMP2A-203ENST00000597209 DEFA4P12838 97 aa13.59□□□□□ -0.23
CHMP2A-203ENST00000597209 RORCP51449 518 aa13.59□□□□□ -0.23
CHMP2A-203ENST00000597209 LPCAT3Q6P1A2 487 aa13.59□□□□□ -0.23
CHMP2A-203ENST00000597209 GTSCR1Q86UQ5 136 aa13.59□□□□□ -0.23
CHMP2A-203ENST00000597209 LAX1Q8IWV1 398 aa13.59□□□□□ -0.23
CHMP2A-203ENST00000597209 DGCR14Q96DF8 476 aaKnown RBP13.59□□□□□ -0.23
CHMP2A-203ENST00000597209 CXorf58Q96LI9 332 aa13.59□□□□□ -0.23
CHMP2A-203ENST00000597209 FXYD6Q9H0Q3 95 aa13.59□□□□□ -0.23
CHMP2A-203ENST00000597209 HUWE1Q7Z6Z7 4374 aaKnown RBP13.58□□□□□ -0.23
CHMP2A-203ENST00000597209 TRBV7-1A0A0A6YYK4 115 aa13.58□□□□□ -0.24
CHMP2A-203ENST00000597209 OR2C1O95371 312 aa13.58□□□□□ -0.24
CHMP2A-203ENST00000597209 RLN1P04808 185 aa13.58□□□□□ -0.24
CHMP2A-203ENST00000597209 HLA-DMAP28067 261 aa13.58□□□□□ -0.24
CHMP2A-203ENST00000597209 HRH1P35367 487 aa13.58□□□□□ -0.24
CHMP2A-203ENST00000597209 ARL3P36405 182 aa13.58□□□□□ -0.24
CHMP2A-203ENST00000597209 ERVK-16P61578 105 aa13.58□□□□□ -0.24
CHMP2A-203ENST00000597209 CLEC19AQ6UXS0 136 aa13.58□□□□□ -0.24
CHMP2A-203ENST00000597209 HSD17B13Q7Z5P4 300 aaPredicted RBP13.58□□□□□ -0.24
CHMP2A-203ENST00000597209 QTRT1Q9BXR0 403 aaKnown RBP13.58□□□□□ -0.24
CHMP2A-203ENST00000597209 FAM212BQ9NTI7 297 aaPredicted RBP13.58□□□□□ -0.24
CHMP2A-203ENST00000597209 THYN1Q9P016 225 aa13.58□□□□□ -0.24
CHMP2A-203ENST00000597209 STAB2Q8WWQ8 2551 aa13.58□□□□□ -0.24
CHMP2A-203ENST00000597209 KMT2CQ8NEZ4 4911 aaKnown RBP13.57□□□□□ -0.24
CHMP2A-203ENST00000597209 IZUMO1RA6ND01 250 aa13.57□□□□□ -0.24
CHMP2A-203ENST00000597209 C2orf70A6NJV1 201 aa13.57□□□□□ -0.24
CHMP2A-203ENST00000597209 MARCH11A6NNE9 402 aa13.57□□□□□ -0.24
CHMP2A-203ENST00000597209 REG1AP05451 166 aa13.57□□□□□ -0.24
CHMP2A-203ENST00000597209 ELK1P19419 428 aa13.57□□□□□ -0.24
CHMP2A-203ENST00000597209 RCVRNP35243 200 aa13.57□□□□□ -0.24
CHMP2A-203ENST00000597209 LPAR6P43657 344 aa13.57□□□□□ -0.24
CHMP2A-203ENST00000597209 DEFB114Q30KQ6 69 aa13.57□□□□□ -0.24
CHMP2A-203ENST00000597209 ZNF585BQ52M93 769 aa13.57□□□□□ -0.24
CHMP2A-203ENST00000597209 TECRQ9NZ01 308 aaKnown RBP13.57□□□□□ -0.24
CHMP2A-203ENST00000597209 TEX50A0A1B0GTY4 177 aa13.56□□□□□ -0.24
CHMP2A-203ENST00000597209 CYB5BO43169 146 aa13.56□□□□□ -0.24
CHMP2A-203ENST00000597209 HPGDSO60760 199 aa13.56□□□□□ -0.24
CHMP2A-203ENST00000597209 GABARAPO95166 117 aa13.56□□□□□ -0.24
CHMP2A-203ENST00000597209 IGHV3-23P01764 117 aa13.56□□□□□ -0.24
CHMP2A-203ENST00000597209 HLA-AP01891 365 aaKnown RBP13.56□□□□□ -0.24
CHMP2A-203ENST00000597209 TRAPPC2P0DI81 140 aa13.56□□□□□ -0.24
CHMP2A-203ENST00000597209 TRAPPC2BP0DI82 140 aa13.56□□□□□ -0.24
CHMP2A-203ENST00000597209 FOLR2P14207 255 aa13.56□□□□□ -0.24
CHMP2A-203ENST00000597209 UCP3P55916 312 aa13.56□□□□□ -0.24
CHMP2A-203ENST00000597209 TSPAN5P62079 268 aa13.56□□□□□ -0.24
CHMP2A-203ENST00000597209 CD300EQ496F6 205 aaPredicted RBP13.56□□□□□ -0.24
CHMP2A-203ENST00000597209 FAM106AQ4KMX7 169 aa13.56□□□□□ -0.24
CHMP2A-203ENST00000597209 MZT2AQ6P582 158 aa13.56□□□□□ -0.24
CHMP2A-203ENST00000597209 SNX29P2Q8IUI4 249 aa13.56□□□□□ -0.24
CHMP2A-203ENST00000597209 OR1L8Q8NGR8 309 aa13.56□□□□□ -0.24
CHMP2A-203ENST00000597209 DYNLRB2Q8TF09 96 aa13.56□□□□□ -0.24
CHMP2A-203ENST00000597209 FCAMRQ8WWV6 532 aa13.56□□□□□ -0.24
CHMP2A-203ENST00000597209 ZC4H2Q9NQZ6 224 aa13.56□□□□□ -0.24
CHMP2A-203ENST00000597209 MFSD2BA6NFX1 497 aa13.55□□□□□ -0.24
CHMP2A-203ENST00000597209 ZNF785A8K8V0 405 aa13.55□□□□□ -0.24
CHMP2A-203ENST00000597209 A8MWP6 167 aa13.55□□□□□ -0.24
CHMP2A-203ENST00000597209 TPPPO94811 219 aa13.55□□□□□ -0.24
CHMP2A-203ENST00000597209 SMIM18P0DKX4 95 aa13.55□□□□□ -0.24
CHMP2A-203ENST00000597209 PTBP1P26599 531 aaKnown RBP eCLIP13.55□□□□□ -0.24
CHMP2A-203ENST00000597209 S100GP29377 79 aa13.55□□□□□ -0.24
CHMP2A-203ENST00000597209 CTF1Q16619 201 aa13.55□□□□□ -0.24
CHMP2A-203ENST00000597209 ZNF502Q8TBZ5 544 aa13.55□□□□□ -0.24
CHMP2A-203ENST00000597209 AP3S1Q92572 193 aa13.55□□□□□ -0.24
CHMP2A-203ENST00000597209 NDUFA4L2Q9NRX3 87 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms