RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 ZNF436Q9C0F3 470 aaPredicted RBP7.37□□□□□ -1.23
LIG1-209ENST00000596104 ACOT13Q9NPJ3 140 aa7.37□□□□□ -1.23
LIG1-209ENST00000596104 SCN3BQ9NY72 215 aa7.37□□□□□ -1.23
LIG1-209ENST00000596104 UBQLN2Q9UHD9 624 aa7.37□□□□□ -1.23
LIG1-209ENST00000596104 SPATA2Q9UM82 520 aa7.37□□□□□ -1.23
LIG1-209ENST00000596104 UFC1Q9Y3C8 167 aa7.37□□□□□ -1.23
LIG1-209ENST00000596104 TRAV1-2A0A0B4J238 106 aa7.36□□□□□ -1.23
LIG1-209ENST00000596104 IGLC7A0M8Q6 106 aa7.36□□□□□ -1.23
LIG1-209ENST00000596104 DEFA4P12838 97 aa7.36□□□□□ -1.23
LIG1-209ENST00000596104 HLA-GP17693 338 aa7.36□□□□□ -1.23
LIG1-209ENST00000596104 CRHBPP24387 322 aa7.36□□□□□ -1.23
LIG1-209ENST00000596104 PLET1Q6UQ28 207 aa7.36□□□□□ -1.23
LIG1-209ENST00000596104 SSX9Q7RTT3 188 aa7.36□□□□□ -1.23
LIG1-209ENST00000596104 SLC38A6Q8IZM9 456 aa7.36□□□□□ -1.23
LIG1-209ENST00000596104 MFSD4AQ8N468 514 aa7.36□□□□□ -1.23
LIG1-209ENST00000596104 TMEM217Q8N7C4 229 aa7.36□□□□□ -1.23
LIG1-209ENST00000596104 STPG3Q8N7X2 389 aa7.36□□□□□ -1.23
LIG1-209ENST00000596104 GPHA2Q96T91 129 aa7.36□□□□□ -1.23
LIG1-209ENST00000596104 MGLLQ99685 303 aa7.36□□□□□ -1.23
LIG1-209ENST00000596104 BET1LQ9NYM9 111 aa7.36□□□□□ -1.23
LIG1-209ENST00000596104 TAS2R8Q9NYW2 309 aa7.36□□□□□ -1.23
LIG1-209ENST00000596104 METTL21EPA6NDL7 271 aa7.35□□□□□ -1.23
LIG1-209ENST00000596104 PDCD5O14737 125 aa7.35□□□□□ -1.23
LIG1-209ENST00000596104 HRASP01112 189 aa7.35□□□□□ -1.23
LIG1-209ENST00000596104 RPL35AP18077 110 aaKnown RBP7.35□□□□□ -1.23
LIG1-209ENST00000596104 PTBP1P26599 531 aaKnown RBP eCLIP7.35□□□□□ -1.23
LIG1-209ENST00000596104 FCGR2BP31994 310 aaPredicted RBP7.35□□□□□ -1.23
LIG1-209ENST00000596104 OR2B8PP59922 312 aa7.35□□□□□ -1.23
LIG1-209ENST00000596104 ARL6IP1Q15041 203 aa7.35□□□□□ -1.23
LIG1-209ENST00000596104 TIMM50Q3ZCQ8 353 aa7.35□□□□□ -1.23
LIG1-209ENST00000596104 CDNFQ49AH0 187 aa7.35□□□□□ -1.23
LIG1-209ENST00000596104 HACD4Q5VWC8 232 aa7.35□□□□□ -1.23
LIG1-209ENST00000596104 CNIH2Q6PI25 160 aa7.35□□□□□ -1.23
LIG1-209ENST00000596104 ZNF66Q6ZN08 573 aa7.35□□□□□ -1.23
LIG1-209ENST00000596104 NR2C2APQ86WQ0 139 aa7.35□□□□□ -1.23
LIG1-209ENST00000596104 OR4A5Q8NH83 315 aa7.35□□□□□ -1.23
LIG1-209ENST00000596104 DCSTAMPQ9H295 470 aa7.35□□□□□ -1.23
LIG1-209ENST00000596104 MAP6D1Q9H9H5 199 aa7.35□□□□□ -1.23
LIG1-209ENST00000596104 TPRKBQ9Y3C4 175 aa7.35□□□□□ -1.23
LIG1-209ENST00000596104 TRAV3A0A0B4J244 114 aa7.34□□□□□ -1.23
LIG1-209ENST00000596104 TGOLN2O43493 480 aa7.34□□□□□ -1.23
LIG1-209ENST00000596104 RGS10O43665 173 aa7.34□□□□□ -1.23
LIG1-209ENST00000596104 SSX5O60225 188 aa7.34□□□□□ -1.23
LIG1-209ENST00000596104 PRR20EP86478 221 aa7.34□□□□□ -1.23
LIG1-209ENST00000596104 PRR20CP86479 221 aa7.34□□□□□ -1.23
LIG1-209ENST00000596104 PRR20DP86480 221 aa7.34□□□□□ -1.23
LIG1-209ENST00000596104 PRR20BP86481 221 aa7.34□□□□□ -1.23
LIG1-209ENST00000596104 PRR20AP86496 221 aa7.34□□□□□ -1.23
LIG1-209ENST00000596104 POU2AF1Q16633 256 aa7.34□□□□□ -1.23
LIG1-209ENST00000596104 VN1R17PQ8TDU5 208 aa7.34□□□□□ -1.23
LIG1-209ENST00000596104 NUDCD2Q8WVJ2 157 aa7.34□□□□□ -1.23
LIG1-209ENST00000596104 GALNT14Q96FL9 552 aa7.34□□□□□ -1.23
LIG1-209ENST00000596104 SRSF8Q9BRL6 282 aaKnown RBP7.34□□□□□ -1.23
LIG1-209ENST00000596104 ATG5Q9H1Y0 275 aa7.34□□□□□ -1.23
LIG1-209ENST00000596104 DAZ1Q9NQZ3 744 aaKnown RBP7.34□□□□□ -1.23
LIG1-209ENST00000596104 HECTD4Q9Y4D8 3996 aa7.33□□□□□ -1.24
LIG1-209ENST00000596104 TMEM235A6NFC5 223 aa7.33□□□□□ -1.24
LIG1-209ENST00000596104 OR4C46A6NHA9 309 aa7.33□□□□□ -1.24
LIG1-209ENST00000596104 F8W735 103 aaPredicted RBP7.33□□□□□ -1.24
LIG1-209ENST00000596104 UPK2O00526 184 aa7.33□□□□□ -1.24
LIG1-209ENST00000596104 EBAG9O00559 213 aa7.33□□□□□ -1.24
LIG1-209ENST00000596104 RBFOX2O43251 390 aaKnown RBP eCLIP7.33□□□□□ -1.24
LIG1-209ENST00000596104 RPA2P15927 270 aa7.33□□□□□ -1.24
LIG1-209ENST00000596104 RAB3BP20337 219 aa7.33□□□□□ -1.24
LIG1-209ENST00000596104 MSMO1Q15800 293 aa7.33□□□□□ -1.24
LIG1-209ENST00000596104 LAMTOR1Q6IAA8 161 aa7.33□□□□□ -1.24
LIG1-209ENST00000596104 ZNF773Q6PK81 442 aa7.33□□□□□ -1.24
LIG1-209ENST00000596104 PRSS48Q7RTY5 328 aa7.33□□□□□ -1.24
LIG1-209ENST00000596104 SPAG16Q8N0X2 631 aa7.33□□□□□ -1.24
LIG1-209ENST00000596104 GATAD1Q8WUU5 269 aa7.33□□□□□ -1.24
LIG1-209ENST00000596104 ZNF414Q96IQ9 312 aa7.33□□□□□ -1.24
LIG1-209ENST00000596104 HRASLSQ9HDD0 168 aa7.33□□□□□ -1.24
LIG1-209ENST00000596104 CCL28Q9NRJ3 127 aa7.33□□□□□ -1.24
LIG1-209ENST00000596104 THYN1Q9P016 225 aa7.33□□□□□ -1.24
LIG1-209ENST00000596104 ANXA10Q9UJ72 324 aa7.33□□□□□ -1.24
LIG1-209ENST00000596104 KIAA1109Q2LD37 5005 aa7.32□□□□□ -1.24
LIG1-209ENST00000596104 OR2T8A6NH00 312 aa7.32□□□□□ -1.24
LIG1-209ENST00000596104 K7EMT4 169 aa7.32□□□□□ -1.24
LIG1-209ENST00000596104 NDUFA4O00483 81 aa7.32□□□□□ -1.24
LIG1-209ENST00000596104 TNFSF12O43508 249 aa7.32□□□□□ -1.24
LIG1-209ENST00000596104 CTSDP07339 412 aaPredicted RBP7.32□□□□□ -1.24
LIG1-209ENST00000596104 FGF2P09038 288 aa7.32□□□□□ -1.24
LIG1-209ENST00000596104 MYL9P24844 172 aa7.32□□□□□ -1.24
LIG1-209ENST00000596104 ADMP35318 185 aa7.32□□□□□ -1.24
LIG1-209ENST00000596104 MFAP2P55001 183 aa7.32□□□□□ -1.24
LIG1-209ENST00000596104 TAS2R31P59538 309 aa7.32□□□□□ -1.24
LIG1-209ENST00000596104 NANOS2P60321 138 aaKnown RBP7.32□□□□□ -1.24
LIG1-209ENST00000596104 TBCEQ15813 527 aaPredicted RBP7.32□□□□□ -1.24
LIG1-209ENST00000596104 APRG1Q8IVJ8 170 aa7.32□□□□□ -1.24
LIG1-209ENST00000596104 GDPD1Q8N9F7 314 aa7.32□□□□□ -1.24
LIG1-209ENST00000596104 OR10W1Q8NGF6 305 aa7.32□□□□□ -1.24
LIG1-209ENST00000596104 OR5B3Q8NH48 314 aa7.32□□□□□ -1.24
LIG1-209ENST00000596104 CD300LFQ8TDQ1 290 aa7.32□□□□□ -1.24
LIG1-209ENST00000596104 BSCL2Q96G97 398 aaPredicted RBP7.32□□□□□ -1.24
LIG1-209ENST00000596104 ATP6V0BQ99437 205 aa7.32□□□□□ -1.24
LIG1-209ENST00000596104 AIFM2Q9BRQ8 373 aa7.32□□□□□ -1.24
LIG1-209ENST00000596104 CHRDL1Q9BU40 450 aa7.32□□□□□ -1.24
LIG1-209ENST00000596104 QTRT1Q9BXR0 403 aaKnown RBP7.32□□□□□ -1.24
LIG1-209ENST00000596104 CCDC90BQ9GZT6 254 aa7.32□□□□□ -1.24
LIG1-209ENST00000596104 VCXQ9H320 206 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms