RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 VSTM2AQ8TAG5 236 aa12.31□□□□□ -0.44
USHBP1-205ENST00000595993 MARCH1Q8TCQ1 289 aa12.31□□□□□ -0.44
USHBP1-205ENST00000595993 CD300LFQ8TDQ1 290 aa12.31□□□□□ -0.44
USHBP1-205ENST00000595993 SRRQ9GZT4 340 aa12.31□□□□□ -0.44
USHBP1-205ENST00000595993 BET1LQ9NYM9 111 aa12.31□□□□□ -0.44
USHBP1-205ENST00000595993 COMMD9Q9P000 198 aa12.31□□□□□ -0.44
USHBP1-205ENST00000595993 ZNF256Q9Y2P7 627 aaPredicted RBP12.31□□□□□ -0.44
USHBP1-205ENST00000595993 A0A1B0GW64 132 aa12.3□□□□□ -0.44
USHBP1-205ENST00000595993 A6NHS1 94 aa12.3□□□□□ -0.44
USHBP1-205ENST00000595993 MSGN1A6NI15 193 aa12.3□□□□□ -0.44
USHBP1-205ENST00000595993 DISC1C4P0D8 188 aa12.3□□□□□ -0.44
USHBP1-205ENST00000595993 E7EUB6 86 aa12.3□□□□□ -0.44
USHBP1-205ENST00000595993 IL6RP08887 468 aaPredicted RBP12.3□□□□□ -0.44
USHBP1-205ENST00000595993 NQO2P16083 231 aa12.3□□□□□ -0.44
USHBP1-205ENST00000595993 PTBP1P26599 531 aaKnown RBP eCLIP12.3□□□□□ -0.44
USHBP1-205ENST00000595993 RAB9AP51151 201 aa12.3□□□□□ -0.44
USHBP1-205ENST00000595993 PIGPP57054 158 aa12.3□□□□□ -0.44
USHBP1-205ENST00000595993 RND3P61587 244 aa12.3□□□□□ -0.44
USHBP1-205ENST00000595993 KLF9Q13886 244 aaPredicted RBP12.3□□□□□ -0.44
USHBP1-205ENST00000595993 CASC10Q5T4H9 136 aa12.3□□□□□ -0.44
USHBP1-205ENST00000595993 TMEM65Q6PI78 240 aa12.3□□□□□ -0.44
USHBP1-205ENST00000595993 ZNF491Q8N8L2 437 aa12.3□□□□□ -0.44
USHBP1-205ENST00000595993 OR5T1Q8NG75 326 aa12.3□□□□□ -0.44
USHBP1-205ENST00000595993 OR51S1Q8NGJ8 323 aa12.3□□□□□ -0.44
USHBP1-205ENST00000595993 ZNF486Q96H40 463 aaPredicted RBP12.3□□□□□ -0.44
USHBP1-205ENST00000595993 ASCL2Q99929 193 aa12.3□□□□□ -0.44
USHBP1-205ENST00000595993 GNB4Q9HAV0 340 aa12.3□□□□□ -0.44
USHBP1-205ENST00000595993 TMEM140Q9NV12 185 aa12.3□□□□□ -0.44
USHBP1-205ENST00000595993 BIRC6Q9NR09 4857 aa12.29□□□□□ -0.44
USHBP1-205ENST00000595993 STARD9Q9P2P6 4700 aa12.29□□□□□ -0.44
USHBP1-205ENST00000595993 CGB1A6NKQ9 187 aa12.29□□□□□ -0.44
USHBP1-205ENST00000595993 CREBL2O60519 120 aaPredicted RBP12.29□□□□□ -0.44
USHBP1-205ENST00000595993 IGKV1-39P01597 117 aa12.29□□□□□ -0.44
USHBP1-205ENST00000595993 IGKV1D-39P04432 117 aa12.29□□□□□ -0.44
USHBP1-205ENST00000595993 INSL3P51460 131 aa12.29□□□□□ -0.44
USHBP1-205ENST00000595993 RUNX1Q01196 453 aa12.29□□□□□ -0.44
USHBP1-205ENST00000595993 SPANXN2Q5MJ10 180 aa12.29□□□□□ -0.44
USHBP1-205ENST00000595993 MUC7Q8TAX7 377 aa12.29□□□□□ -0.44
USHBP1-205ENST00000595993 MS4A10Q96PG2 267 aa12.29□□□□□ -0.44
USHBP1-205ENST00000595993 PHB2Q99623 299 aa12.29□□□□□ -0.44
USHBP1-205ENST00000595993 SLC2A8Q9NY64 477 aa12.29□□□□□ -0.44
USHBP1-205ENST00000595993 MARCH11A6NNE9 402 aa12.28□□□□□ -0.44
USHBP1-205ENST00000595993 TEX22C9J3V5 150 aa12.28□□□□□ -0.44
USHBP1-205ENST00000595993 I3L521 148 aa12.28□□□□□ -0.44
USHBP1-205ENST00000595993 UPK2O00526 184 aa12.28□□□□□ -0.44
USHBP1-205ENST00000595993 MPPED1O15442 326 aa12.28□□□□□ -0.44
USHBP1-205ENST00000595993 ACTL6BO94805 426 aa12.28□□□□□ -0.44
USHBP1-205ENST00000595993 CTSDP07339 412 aaPredicted RBP12.28□□□□□ -0.44
USHBP1-205ENST00000595993 S100GP29377 79 aa12.28□□□□□ -0.44
USHBP1-205ENST00000595993 G6PCP35575 357 aa12.28□□□□□ -0.44
USHBP1-205ENST00000595993 DEFA5Q01523 94 aa12.28□□□□□ -0.44
USHBP1-205ENST00000595993 DMBX1Q8NFW5 382 aa12.28□□□□□ -0.44
USHBP1-205ENST00000595993 OR4A5Q8NH83 315 aa12.28□□□□□ -0.44
USHBP1-205ENST00000595993 UBE2E2Q96LR5 201 aa12.28□□□□□ -0.44
USHBP1-205ENST00000595993 OR5B12Q96R08 314 aa12.28□□□□□ -0.44
USHBP1-205ENST00000595993 TP53RKQ96S44 253 aa12.28□□□□□ -0.44
USHBP1-205ENST00000595993 SDHCQ99643 169 aaPredicted RBP12.28□□□□□ -0.44
USHBP1-205ENST00000595993 RTBDNQ9BSG5 229 aaPredicted RBP12.28□□□□□ -0.44
USHBP1-205ENST00000595993 HRASLSQ9HDD0 168 aa12.28□□□□□ -0.44
USHBP1-205ENST00000595993 FAM212BQ9NTI7 297 aaPredicted RBP12.28□□□□□ -0.44
USHBP1-205ENST00000595993 SMAD5-AS1Q9Y6J3 95 aa12.28□□□□□ -0.44
USHBP1-205ENST00000595993 HMX3A6NHT5 357 aa12.27□□□□□ -0.45
USHBP1-205ENST00000595993 KRASP01116 189 aa12.27□□□□□ -0.45
USHBP1-205ENST00000595993 HLA-GP17693 338 aa12.27□□□□□ -0.45
USHBP1-205ENST00000595993 MAS1LP35410 378 aa12.27□□□□□ -0.45
USHBP1-205ENST00000595993 RPL27AP46776 148 aaKnown RBP12.27□□□□□ -0.45
USHBP1-205ENST00000595993 RPL8P62917 257 aaKnown RBP12.27□□□□□ -0.45
USHBP1-205ENST00000595993 C19orf35Q6ZS72 473 aa12.27□□□□□ -0.45
USHBP1-205ENST00000595993 ADAD2Q8NCV1 583 aaKnown RBP12.27□□□□□ -0.45
USHBP1-205ENST00000595993 OR11H1Q8NG94 326 aa12.27□□□□□ -0.45
USHBP1-205ENST00000595993 ZFAND1Q8TCF1 268 aa12.27□□□□□ -0.45
USHBP1-205ENST00000595993 PRRT1Q99946 306 aa12.27□□□□□ -0.45
USHBP1-205ENST00000595993 AIFM2Q9BRQ8 373 aa12.27□□□□□ -0.45
USHBP1-205ENST00000595993 ALX4Q9H161 411 aaPredicted RBP12.27□□□□□ -0.45
USHBP1-205ENST00000595993 C5orf66Q9H5L9 145 aa12.27□□□□□ -0.45
USHBP1-205ENST00000595993 MCUBQ9NWR8 336 aa12.27□□□□□ -0.45
USHBP1-205ENST00000595993 VSIG4Q9Y279 399 aa12.27□□□□□ -0.45
USHBP1-205ENST00000595993 H0Y980 276 aa12.26□□□□□ -0.45
USHBP1-205ENST00000595993 H3BUA1 57 aa12.26□□□□□ -0.45
USHBP1-205ENST00000595993 RBMXL2O75526 392 aaKnown RBP12.26□□□□□ -0.45
USHBP1-205ENST00000595993 TRGV3P03979 118 aa12.26□□□□□ -0.45
USHBP1-205ENST00000595993 OR8U8P0C7N1 319 aa12.26□□□□□ -0.45
USHBP1-205ENST00000595993 OR9G9P0C7N8 305 aa12.26□□□□□ -0.45
USHBP1-205ENST00000595993 TPPP2P59282 170 aa12.26□□□□□ -0.45
USHBP1-205ENST00000595993 ERVK-16P61578 105 aa12.26□□□□□ -0.45
USHBP1-205ENST00000595993 SURF2Q15527 256 aaPredicted RBP12.26□□□□□ -0.45
USHBP1-205ENST00000595993 BAK1Q16611 211 aa12.26□□□□□ -0.45
USHBP1-205ENST00000595993 CNPY1Q3B7I2 92 aa12.26□□□□□ -0.45
USHBP1-205ENST00000595993 SBSPONQ8IVN8 264 aa12.26□□□□□ -0.45
USHBP1-205ENST00000595993 TOMM5Q8N4H5 51 aa12.26□□□□□ -0.45
USHBP1-205ENST00000595993 SEC22AQ96IW7 307 aa12.26□□□□□ -0.45
USHBP1-205ENST00000595993 TMEM68Q96MH6 324 aa12.26□□□□□ -0.45
USHBP1-205ENST00000595993 FYTTD1Q96QD9 318 aaKnown RBP12.26□□□□□ -0.45
USHBP1-205ENST00000595993 SPIN2AQ99865 258 aa12.26□□□□□ -0.45
USHBP1-205ENST00000595993 SPIN2BQ9BPZ2 258 aa12.26□□□□□ -0.45
USHBP1-205ENST00000595993 ZNF355PQ9NSJ1 428 aa12.26□□□□□ -0.45
USHBP1-205ENST00000595993 GPR132Q9UNW8 380 aa12.26□□□□□ -0.45
USHBP1-205ENST00000595993 C3orf85A0A1B0GTC6 90 aa12.25□□□□□ -0.45
USHBP1-205ENST00000595993 IGHV3-11P01762 117 aa12.25□□□□□ -0.45
USHBP1-205ENST00000595993 PRH1P02810 166 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms