RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 TAS2R8Q9NYW2 309 aa10.26□□□□□ -0.77
SHKBP1-208ENST00000595726 MRPS7Q9Y2R9 242 aaKnown RBP10.26□□□□□ -0.77
SHKBP1-208ENST00000595726 LOC102724200A0A096LPH7 203 aaPredicted RBP10.25□□□□□ -0.77
SHKBP1-208ENST00000595726 OR2A4O95047 310 aa10.25□□□□□ -0.77
SHKBP1-208ENST00000595726 ALDH3B2P48448 385 aa10.25□□□□□ -0.77
SHKBP1-208ENST00000595726 RORCP51449 518 aa10.25□□□□□ -0.77
SHKBP1-208ENST00000595726 BRWD1-AS2P59051 145 aa10.25□□□□□ -0.77
SHKBP1-208ENST00000595726 ZNF66Q6ZN08 573 aa10.25□□□□□ -0.77
SHKBP1-208ENST00000595726 MFSD4AQ8N468 514 aa10.25□□□□□ -0.77
SHKBP1-208ENST00000595726 OR4S2Q8NH73 311 aa10.25□□□□□ -0.77
SHKBP1-208ENST00000595726 DYNLRB2Q8TF09 96 aa10.25□□□□□ -0.77
SHKBP1-208ENST00000595726 GIMAP1Q8WWP7 306 aa10.25□□□□□ -0.77
SHKBP1-208ENST00000595726 GPHA2Q96T91 129 aa10.25□□□□□ -0.77
SHKBP1-208ENST00000595726 EHFQ9NZC4 300 aa10.25□□□□□ -0.77
SHKBP1-208ENST00000595726 PEMTQ9UBM1 199 aa10.25□□□□□ -0.77
SHKBP1-208ENST00000595726 MSGN1A6NI15 193 aa10.24□□□□□ -0.77
SHKBP1-208ENST00000595726 H3BUA1 57 aa10.24□□□□□ -0.77
SHKBP1-208ENST00000595726 TNFSF12O43508 249 aa10.24□□□□□ -0.77
SHKBP1-208ENST00000595726 HPGDSO60760 199 aa10.24□□□□□ -0.77
SHKBP1-208ENST00000595726 NDUFB8O95169 186 aa10.24□□□□□ -0.77
SHKBP1-208ENST00000595726 NAT1P18440 290 aa10.24□□□□□ -0.77
SHKBP1-208ENST00000595726 ELK1P19419 428 aa10.24□□□□□ -0.77
SHKBP1-208ENST00000595726 PRSS3P35030 304 aa10.24□□□□□ -0.77
SHKBP1-208ENST00000595726 FXYD4P59646 89 aa10.24□□□□□ -0.77
SHKBP1-208ENST00000595726 TNXAQ16473 311 aa10.24□□□□□ -0.77
SHKBP1-208ENST00000595726 PRSS8Q16651 343 aa10.24□□□□□ -0.77
SHKBP1-208ENST00000595726 GPR141Q7Z602 305 aa10.24□□□□□ -0.77
SHKBP1-208ENST00000595726 TMEM17Q86X19 198 aa10.24□□□□□ -0.77
SHKBP1-208ENST00000595726 WFDC3Q8IUB2 231 aa10.24□□□□□ -0.77
SHKBP1-208ENST00000595726 DCUN1D5Q9BTE7 237 aa10.24□□□□□ -0.77
SHKBP1-208ENST00000595726 SLC5A7Q9GZV3 580 aa10.24□□□□□ -0.77
SHKBP1-208ENST00000595726 ZNF430Q9H8G1 570 aaPredicted RBP10.24□□□□□ -0.77
SHKBP1-208ENST00000595726 SPRY2O43597 315 aa10.23□□□□□ -0.77
SHKBP1-208ENST00000595726 RFX2P48378 723 aa10.23□□□□□ -0.77
SHKBP1-208ENST00000595726 DEFB135Q30KP9 77 aa10.23□□□□□ -0.77
SHKBP1-208ENST00000595726 ZNF818PQ6ZRF7 136 aa10.23□□□□□ -0.77
SHKBP1-208ENST00000595726 VKORC1L1Q8N0U8 176 aa10.23□□□□□ -0.77
SHKBP1-208ENST00000595726 ZBTB34Q8NCN2 500 aa10.23□□□□□ -0.77
SHKBP1-208ENST00000595726 GPX8Q8TED1 209 aa10.23□□□□□ -0.77
SHKBP1-208ENST00000595726 SRSF12Q8WXF0 261 aaKnown RBP10.23□□□□□ -0.77
SHKBP1-208ENST00000595726 AP3S1Q92572 193 aa10.23□□□□□ -0.77
SHKBP1-208ENST00000595726 TMEM68Q96MH6 324 aa10.23□□□□□ -0.77
SHKBP1-208ENST00000595726 SMIM31A0A1B0GVY4 71 aa10.22□□□□□ -0.77
SHKBP1-208ENST00000595726 BMPR1BO00238 502 aa10.22□□□□□ -0.77
SHKBP1-208ENST00000595726 CREBL2O60519 120 aaPredicted RBP10.22□□□□□ -0.77
SHKBP1-208ENST00000595726 KBTBD11O94819 623 aa10.22□□□□□ -0.77
SHKBP1-208ENST00000595726 PMP2P02689 132 aa10.22□□□□□ -0.77
SHKBP1-208ENST00000595726 APELAP0DMC3 54 aa10.22□□□□□ -0.77
SHKBP1-208ENST00000595726 FOLR2P14207 255 aa10.22□□□□□ -0.77
SHKBP1-208ENST00000595726 ZNF182P17025 639 aaPredicted RBP10.22□□□□□ -0.77
SHKBP1-208ENST00000595726 BMI1P35226 326 aa10.22□□□□□ -0.77
SHKBP1-208ENST00000595726 KIR2DS2P43631 304 aa10.22□□□□□ -0.77
SHKBP1-208ENST00000595726 TAS2R46P59540 309 aa10.22□□□□□ -0.77
SHKBP1-208ENST00000595726 HERV-K104P61576 105 aa10.22□□□□□ -0.77
SHKBP1-208ENST00000595726 C10orf55Q5SWW7 151 aa10.22□□□□□ -0.77
SHKBP1-208ENST00000595726 MZT2AQ6P582 158 aa10.22□□□□□ -0.77
SHKBP1-208ENST00000595726 DHRS11Q6UWP2 260 aa10.22□□□□□ -0.77
SHKBP1-208ENST00000595726 SLC16A13Q7RTY0 426 aa10.22□□□□□ -0.77
SHKBP1-208ENST00000595726 SNX29P2Q8IUI4 249 aa10.22□□□□□ -0.77
SHKBP1-208ENST00000595726 MMD2Q8IY49 270 aa10.22□□□□□ -0.77
SHKBP1-208ENST00000595726 PUSL1Q8N0Z8 303 aaKnown RBP10.22□□□□□ -0.77
SHKBP1-208ENST00000595726 OR5H2Q8NGV7 314 aa10.22□□□□□ -0.77
SHKBP1-208ENST00000595726 MOB3AQ96BX8 217 aa10.22□□□□□ -0.77
SHKBP1-208ENST00000595726 PHB2Q99623 299 aa10.22□□□□□ -0.77
SHKBP1-208ENST00000595726 ZNF2Q9BSG1 426 aaPredicted RBP10.22□□□□□ -0.77
SHKBP1-208ENST00000595726 TINAGL1Q9GZM7 467 aaPredicted RBP10.22□□□□□ -0.77
SHKBP1-208ENST00000595726 FXYD6Q9H0Q3 95 aa10.22□□□□□ -0.77
SHKBP1-208ENST00000595726 SCPEP1Q9HB40 452 aa10.22□□□□□ -0.77
SHKBP1-208ENST00000595726 ZC4H2Q9NQZ6 224 aa10.22□□□□□ -0.77
SHKBP1-208ENST00000595726 SULT1C2O00338 296 aa10.21□□□□□ -0.77
SHKBP1-208ENST00000595726 HLA-DMAP28067 261 aa10.21□□□□□ -0.77
SHKBP1-208ENST00000595726 GNRHRP30968 328 aa10.21□□□□□ -0.77
SHKBP1-208ENST00000595726 HRH1P35367 487 aa10.21□□□□□ -0.77
SHKBP1-208ENST00000595726 CATR1Q13166 79 aa10.21□□□□□ -0.77
SHKBP1-208ENST00000595726 LYSMD2Q8IV50 215 aa10.21□□□□□ -0.77
SHKBP1-208ENST00000595726 VSTM2AQ8TAG5 236 aa10.21□□□□□ -0.77
SHKBP1-208ENST00000595726 CACNG8Q8WXS5 425 aa10.21□□□□□ -0.77
SHKBP1-208ENST00000595726 COA4Q9NYJ1 87 aa10.21□□□□□ -0.77
SHKBP1-208ENST00000595726 C2orf70A6NJV1 201 aa10.2□□□□□ -0.78
SHKBP1-208ENST00000595726 FAM25AB3EWG3 89 aa10.2□□□□□ -0.78
SHKBP1-208ENST00000595726 FAM25CB3EWG5 89 aa10.2□□□□□ -0.78
SHKBP1-208ENST00000595726 FAM25GB3EWG6 89 aa10.2□□□□□ -0.78
SHKBP1-208ENST00000595726 RBFOX2O43251 390 aaKnown RBP eCLIP10.2□□□□□ -0.78
SHKBP1-208ENST00000595726 ACTL6BO94805 426 aa10.2□□□□□ -0.78
SHKBP1-208ENST00000595726 HLA-AP01891 365 aaKnown RBP10.2□□□□□ -0.78
SHKBP1-208ENST00000595726 RCVRNP35243 200 aa10.2□□□□□ -0.78
SHKBP1-208ENST00000595726 SPCS2Q15005 226 aa10.2□□□□□ -0.78
SHKBP1-208ENST00000595726 LINC00336Q6ZUF6 198 aa10.2□□□□□ -0.78
SHKBP1-208ENST00000595726 SSX9Q7RTT3 188 aa10.2□□□□□ -0.78
SHKBP1-208ENST00000595726 CLVS1Q8IUQ0 354 aaPredicted RBP10.2□□□□□ -0.78
SHKBP1-208ENST00000595726 TMEM61Q8N0U2 210 aa10.2□□□□□ -0.78
SHKBP1-208ENST00000595726 SPAG16Q8N0X2 631 aa10.2□□□□□ -0.78
SHKBP1-208ENST00000595726 ADAD2Q8NCV1 583 aaKnown RBP10.2□□□□□ -0.78
SHKBP1-208ENST00000595726 OR52B4Q8NGK2 314 aa10.2□□□□□ -0.78
SHKBP1-208ENST00000595726 OR51H1Q8NH63 302 aa10.2□□□□□ -0.78
SHKBP1-208ENST00000595726 TMEM167AQ8TBQ9 72 aa10.2□□□□□ -0.78
SHKBP1-208ENST00000595726 BORCS5Q969J3 196 aa10.2□□□□□ -0.78
SHKBP1-208ENST00000595726 OR2A7Q96R45 310 aa10.2□□□□□ -0.78
SHKBP1-208ENST00000595726 PLA2G2EQ9NZK7 142 aa10.2□□□□□ -0.78
SHKBP1-208ENST00000595726 MPPED1O15442 326 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms