RNA–Protein interactions for RNA: ENST00000595541.1

SIN3B-206, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2 BASIC

Gene SIN3B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-206ENST00000595541 ZNF134P52741 427 aa13.6□□□□□ -0.23
SIN3B-206ENST00000595541 EDDM3AQ14507 147 aa13.6□□□□□ -0.23
SIN3B-206ENST00000595541 WDR82Q6UXN9 313 aa13.6□□□□□ -0.23
SIN3B-206ENST00000595541 MPDU1O75352 247 aa13.59□□□□□ -0.23
SIN3B-206ENST00000595541 GPX1P07203 203 aa13.59□□□□□ -0.23
SIN3B-206ENST00000595541 MYOD1P15172 320 aa13.59□□□□□ -0.23
SIN3B-206ENST00000595541 TMPRSS3P57727 454 aa13.59□□□□□ -0.23
SIN3B-206ENST00000595541 KRTDAPP60985 99 aa13.59□□□□□ -0.23
SIN3B-206ENST00000595541 RELBQ01201 579 aa13.59□□□□□ -0.23
SIN3B-206ENST00000595541 TMEM183BQ1AE95 376 aa13.59□□□□□ -0.23
SIN3B-206ENST00000595541 TDHQ8IZJ6 230 aa13.59□□□□□ -0.23
SIN3B-206ENST00000595541 Q0VG73 95 aa13.59□□□□□ -0.23
SIN3B-206ENST00000595541 RNFT1Q5M7Z0 435 aa13.59□□□□□ -0.23
SIN3B-206ENST00000595541 CD177Q8N6Q3 437 aa13.59□□□□□ -0.23
SIN3B-206ENST00000595541 TCTEX1D1Q8N7M0 179 aa13.59□□□□□ -0.23
SIN3B-206ENST00000595541 STPG3Q8N7X2 389 aa13.59□□□□□ -0.23
SIN3B-206ENST00000595541 OR4A16Q8NH70 328 aa13.59□□□□□ -0.23
SIN3B-206ENST00000595541 FAM122AQ96E09 287 aa13.59□□□□□ -0.23
SIN3B-206ENST00000595541 RANP62826 216 aaKnown RBP13.58□□□□□ -0.24
SIN3B-206ENST00000595541 GAGE1Q13065 139 aa13.58□□□□□ -0.24
SIN3B-206ENST00000595541 MMDQ15546 238 aa13.58□□□□□ -0.24
SIN3B-206ENST00000595541 DMRTA1Q5VZB9 504 aa13.58□□□□□ -0.24
SIN3B-206ENST00000595541 DOLPP1Q86YN1 238 aa13.58□□□□□ -0.24
SIN3B-206ENST00000595541 OR4P4Q8NGL7 312 aa13.58□□□□□ -0.24
SIN3B-206ENST00000595541 NANOS1Q8WY41 292 aaKnown RBP13.58□□□□□ -0.24
SIN3B-206ENST00000595541 RNASE7Q9H1E1 156 aaKnown RBP13.58□□□□□ -0.24
SIN3B-206ENST00000595541 COL27A1Q8IZC6 1860 aaPredicted RBP13.58□□□□□ -0.24
SIN3B-206ENST00000595541 TNCP24821 2201 aa13.58□□□□□ -0.24
SIN3B-206ENST00000595541 ACTL6BO94805 426 aa13.58□□□□□ -0.24
SIN3B-206ENST00000595541 IGHV1-2P23083 117 aa13.58□□□□□ -0.24
SIN3B-206ENST00000595541 GPR12P47775 334 aa13.58□□□□□ -0.24
SIN3B-206ENST00000595541 MEOX1P50221 254 aa13.58□□□□□ -0.24
SIN3B-206ENST00000595541 FXYD3Q14802 87 aa13.58□□□□□ -0.24
SIN3B-206ENST00000595541 MIR17HGQ75NE6 70 aa13.58□□□□□ -0.24
SIN3B-206ENST00000595541 TXNDC17Q9BRA2 123 aa13.58□□□□□ -0.24
SIN3B-206ENST00000595541 M0R1X1 148 aa13.57□□□□□ -0.24
SIN3B-206ENST00000595541 AGFG2O95081 481 aa13.57□□□□□ -0.24
SIN3B-206ENST00000595541 GCNT2Q8N0V5 402 aa13.57□□□□□ -0.24
SIN3B-206ENST00000595541 WDR31Q8NA23 367 aa13.57□□□□□ -0.24
SIN3B-206ENST00000595541 FOXJ2Q9P0K8 574 aa13.57□□□□□ -0.24
SIN3B-206ENST00000595541 SPRR3Q9UBC9 169 aa13.57□□□□□ -0.24
SIN3B-206ENST00000595541 TBL2Q9Y4P3 447 aaKnown RBP13.57□□□□□ -0.24
SIN3B-206ENST00000595541 CFAP47Q6ZTR5 3102 aa13.57□□□□□ -0.24
SIN3B-206ENST00000595541 CTRLP40313 264 aa13.57□□□□□ -0.24
SIN3B-206ENST00000595541 DUSP3P51452 185 aaPredicted RBP13.57□□□□□ -0.24
SIN3B-206ENST00000595541 TCL1AP56279 114 aa13.57□□□□□ -0.24
SIN3B-206ENST00000595541 GABRA6Q16445 453 aa13.57□□□□□ -0.24
SIN3B-206ENST00000595541 MOB3BQ86TA1 216 aa13.57□□□□□ -0.24
SIN3B-206ENST00000595541 C11orf52Q96A22 123 aa13.57□□□□□ -0.24
SIN3B-206ENST00000595541 SFXN3Q9BWM7 321 aa13.57□□□□□ -0.24
SIN3B-206ENST00000595541 SPRY4Q9C004 299 aa13.57□□□□□ -0.24
SIN3B-206ENST00000595541 TCF19Q9Y242 345 aa13.57□□□□□ -0.24
SIN3B-206ENST00000595541 TRGV10A0A0A0MS01 117 aa13.56□□□□□ -0.24
SIN3B-206ENST00000595541 A0A1W2PNU3 283 aaPredicted RBP13.56□□□□□ -0.24
SIN3B-206ENST00000595541 C9orf172C9J069 976 aa13.56□□□□□ -0.24
SIN3B-206ENST00000595541 RPEL1Q2QD12 228 aa13.56□□□□□ -0.24
SIN3B-206ENST00000595541 LEAP2Q969E1 77 aa13.56□□□□□ -0.24
SIN3B-206ENST00000595541 NRN1Q9NPD7 142 aa13.56□□□□□ -0.24
SIN3B-206ENST00000595541 DIRC3C9JPN6 131 aa13.56□□□□□ -0.24
SIN3B-206ENST00000595541 IGFBP2P18065 325 aa13.56□□□□□ -0.24
SIN3B-206ENST00000595541 CRYBB3P26998 211 aa13.56□□□□□ -0.24
SIN3B-206ENST00000595541 MORN2Q502X0 79 aa13.56□□□□□ -0.24
SIN3B-206ENST00000595541 CENPWQ5EE01 88 aa13.56□□□□□ -0.24
SIN3B-206ENST00000595541 FAM90A1Q86YD7 464 aa13.56□□□□□ -0.24
SIN3B-206ENST00000595541 UHRF2Q96PU4 802 aa13.56□□□□□ -0.24
SIN3B-206ENST00000595541 NPVFQ9HCQ7 196 aa13.56□□□□□ -0.24
SIN3B-206ENST00000595541 TMEM140Q9NV12 185 aa13.56□□□□□ -0.24
SIN3B-206ENST00000595541 NAT8BQ9UHF3 227 aa13.56□□□□□ -0.24
SIN3B-206ENST00000595541 PQLC2Q6ZP29 291 aa13.55□□□□□ -0.24
SIN3B-206ENST00000595541 SIGLECL1Q8N7X8 197 aa13.55□□□□□ -0.24
SIN3B-206ENST00000595541 PRR7Q8TB68 274 aa13.55□□□□□ -0.24
SIN3B-206ENST00000595541 CHODLQ9H9P2 273 aa13.55□□□□□ -0.24
SIN3B-206ENST00000595541 ZDBF2Q9HCK1 2354 aa13.55□□□□□ -0.24
SIN3B-206ENST00000595541 TRIOBPQ9H2D6 2365 aa13.55□□□□□ -0.24
SIN3B-206ENST00000595541 A0A1W2PS18 150 aa13.55□□□□□ -0.24
SIN3B-206ENST00000595541 C9JCJ5 164 aa13.55□□□□□ -0.24
SIN3B-206ENST00000595541 ZNF83P51522 516 aa13.55□□□□□ -0.24
SIN3B-206ENST00000595541 TMEM136Q6ZRR5 245 aa13.55□□□□□ -0.24
SIN3B-206ENST00000595541 MRPL52Q86TS9 123 aaKnown RBP13.55□□□□□ -0.24
SIN3B-206ENST00000595541 STPG4Q8N801 248 aa13.55□□□□□ -0.24
SIN3B-206ENST00000595541 ZNF503Q96F45 646 aa13.55□□□□□ -0.24
SIN3B-206ENST00000595541 GNG12Q9UBI6 72 aa13.55□□□□□ -0.24
SIN3B-206ENST00000595541 SMG1Q96Q15 3661 aaKnown RBP13.55□□□□□ -0.24
SIN3B-206ENST00000595541 TRAV9-1A0A075B6T8 112 aa13.54□□□□□ -0.24
SIN3B-206ENST00000595541 LINC00869P0C866 280 aa13.54□□□□□ -0.24
SIN3B-206ENST00000595541 GATA2P23769 480 aaPredicted RBP13.54□□□□□ -0.24
SIN3B-206ENST00000595541 FABP6P51161 128 aa13.54□□□□□ -0.24
SIN3B-206ENST00000595541 FAM19A2Q8N3H0 131 aa13.54□□□□□ -0.24
SIN3B-206ENST00000595541 GPR179Q6PRD1 2367 aa13.54□□□□□ -0.24
SIN3B-206ENST00000595541 PMCHP20382 165 aa13.54□□□□□ -0.24
SIN3B-206ENST00000595541 MRPL49Q13405 166 aaKnown RBP13.54□□□□□ -0.24
SIN3B-206ENST00000595541 GNB1LQ9BYB4 327 aa13.54□□□□□ -0.24
SIN3B-206ENST00000595541 SPINT2O43291 252 aa13.54□□□□□ -0.24
SIN3B-206ENST00000595541 NDUFB8O95169 186 aa13.54□□□□□ -0.24
SIN3B-206ENST00000595541 AMTP48728 403 aa13.54□□□□□ -0.24
SIN3B-206ENST00000595541 RHOBP62745 196 aa13.54□□□□□ -0.24
SIN3B-206ENST00000595541 HTD2P86397 168 aa13.54□□□□□ -0.24
SIN3B-206ENST00000595541 MAJINQ3KP22 176 aa13.54□□□□□ -0.24
SIN3B-206ENST00000595541 TEPPQ6URK8 271 aa13.54□□□□□ -0.24
SIN3B-206ENST00000595541 FAM214BQ7L5A3 538 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms