RNA–Protein interactions for RNA: ENST00000594399.1

USE1-204, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-204ENST00000594399 KCNAB3O43448 404 aa8.6□□□□□ -1.03
USE1-204ENST00000594399 AMY1AP04745 511 aa8.6□□□□□ -1.03
USE1-204ENST00000594399 PJVKQ0ZLH3 352 aa8.6□□□□□ -1.03
USE1-204ENST00000594399 FCN2Q15485 313 aa8.6□□□□□ -1.03
USE1-204ENST00000594399 MRGPRG-AS1Q2M3A8 158 aa8.6□□□□□ -1.03
USE1-204ENST00000594399 C2orf68Q2NKX9 166 aa8.6□□□□□ -1.03
USE1-204ENST00000594399 IAH1Q2TAA2 248 aaPredicted RBP8.6□□□□□ -1.03
USE1-204ENST00000594399 GSG1LQ6UXU4 331 aa8.6□□□□□ -1.03
USE1-204ENST00000594399 Q6ZRM9 215 aa8.6□□□□□ -1.03
USE1-204ENST00000594399 OR1S1Q8NH92 325 aa8.6□□□□□ -1.03
USE1-204ENST00000594399 SPATA3Q8NHX4 192 aa8.6□□□□□ -1.03
USE1-204ENST00000594399 PDCD10Q9BUL8 212 aa8.6□□□□□ -1.03
USE1-204ENST00000594399 QTRT1Q9BXR0 403 aaKnown RBP8.6□□□□□ -1.03
USE1-204ENST00000594399 COMMD5Q9GZQ3 224 aa8.6□□□□□ -1.03
USE1-204ENST00000594399 TMEM14BQ9NUH8 114 aa8.6□□□□□ -1.03
USE1-204ENST00000594399 hCG_2014768A0A024R1R8 64 aa8.59□□□□□ -1.03
USE1-204ENST00000594399 IGHV7-81A0A0B4J1V7 117 aa8.59□□□□□ -1.03
USE1-204ENST00000594399 FAM181BA6NEQ2 426 aa8.59□□□□□ -1.03
USE1-204ENST00000594399 FCN1O00602 326 aa8.59□□□□□ -1.03
USE1-204ENST00000594399 CNIH1O95406 144 aa8.59□□□□□ -1.03
USE1-204ENST00000594399 RPL27AP46776 148 aaKnown RBP8.59□□□□□ -1.03
USE1-204ENST00000594399 COMPP49747 757 aaPredicted RBP8.59□□□□□ -1.03
USE1-204ENST00000594399 NDPQ00604 133 aa8.59□□□□□ -1.03
USE1-204ENST00000594399 AARDQ4LEZ3 155 aa8.59□□□□□ -1.03
USE1-204ENST00000594399 C9orf152Q5JTZ5 239 aa8.59□□□□□ -1.03
USE1-204ENST00000594399 ZNF562Q6V9R5 426 aa8.59□□□□□ -1.03
USE1-204ENST00000594399 ZNF429Q86V71 674 aa8.59□□□□□ -1.03
USE1-204ENST00000594399 ZBTB8BQ8NAP8 495 aaPredicted RBP8.59□□□□□ -1.03
USE1-204ENST00000594399 OR5B3Q8NH48 314 aa8.59□□□□□ -1.03
USE1-204ENST00000594399 ABHD5Q8WTS1 349 aa8.59□□□□□ -1.03
USE1-204ENST00000594399 ARPC1AQ92747 370 aa8.59□□□□□ -1.03
USE1-204ENST00000594399 OR10C1Q96KK4 312 aa8.59□□□□□ -1.03
USE1-204ENST00000594399 HSPB9Q9BQS6 159 aa8.59□□□□□ -1.03
USE1-204ENST00000594399 PRSS22Q9GZN4 317 aa8.59□□□□□ -1.03
USE1-204ENST00000594399 PARP11Q9NR21 331 aa8.59□□□□□ -1.03
USE1-204ENST00000594399 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.59□□□□□ -1.03
USE1-204ENST00000594399 CACFD1Q9UGQ2 172 aa8.59□□□□□ -1.03
USE1-204ENST00000594399 ZNF257Q9Y2Q1 563 aa8.59□□□□□ -1.03
USE1-204ENST00000594399 OR51B2Q9Y5P1 312 aa8.59□□□□□ -1.03
USE1-204ENST00000594399 ST8SIA3O43173 380 aa8.58□□□□□ -1.04
USE1-204ENST00000594399 PITX3O75364 302 aa8.58□□□□□ -1.04
USE1-204ENST00000594399 SIX6O95475 246 aa8.58□□□□□ -1.04
USE1-204ENST00000594399 IGHG2P01859 326 aa8.58□□□□□ -1.04
USE1-204ENST00000594399 CRYBA1P05813 215 aa8.58□□□□□ -1.04
USE1-204ENST00000594399 MYOD1P15172 320 aa8.58□□□□□ -1.04
USE1-204ENST00000594399 CXCL3P19876 107 aa8.58□□□□□ -1.04
USE1-204ENST00000594399 H2BFSP57053 126 aa8.58□□□□□ -1.04
USE1-204ENST00000594399 BLCAPP62952 87 aa8.58□□□□□ -1.04
USE1-204ENST00000594399 CX3CL1P78423 397 aa8.58□□□□□ -1.04
USE1-204ENST00000594399 SSBP2P81877 361 aaPredicted RBP8.58□□□□□ -1.04
USE1-204ENST00000594399 FXYD3Q14802 87 aa8.58□□□□□ -1.04
USE1-204ENST00000594399 ARSJQ5FYB0 599 aaPredicted RBP8.58□□□□□ -1.04
USE1-204ENST00000594399 C10orf55Q5SWW7 151 aa8.58□□□□□ -1.04
USE1-204ENST00000594399 SLC35E3Q7Z769 313 aa8.58□□□□□ -1.04
USE1-204ENST00000594399 OR11H7Q8NGC8 314 aa8.58□□□□□ -1.04
USE1-204ENST00000594399 OR1L8Q8NGR8 309 aa8.58□□□□□ -1.04
USE1-204ENST00000594399 GRPEL2Q8TAA5 225 aa8.58□□□□□ -1.04
USE1-204ENST00000594399 SRSF12Q8WXF0 261 aaKnown RBP8.58□□□□□ -1.04
USE1-204ENST00000594399 C2orf50Q96LR7 162 aa8.58□□□□□ -1.04
USE1-204ENST00000594399 ZNF702PQ9H963 129 aa8.58□□□□□ -1.04
USE1-204ENST00000594399 DNHD1Q96M86 4753 aa8.57□□□□□ -1.04
USE1-204ENST00000594399 TEX50A0A1B0GTY4 177 aa8.57□□□□□ -1.04
USE1-204ENST00000594399 A0A1B0GVG6 124 aa8.57□□□□□ -1.04
USE1-204ENST00000594399 FAM90A26D6RGX4 464 aa8.57□□□□□ -1.04
USE1-204ENST00000594399 ATP6V0E1O15342 81 aa8.57□□□□□ -1.04
USE1-204ENST00000594399 NXPH3O95157 252 aa8.57□□□□□ -1.04
USE1-204ENST00000594399 SCGB1D2O95969 90 aa8.57□□□□□ -1.04
USE1-204ENST00000594399 IFNA17P01571 189 aa8.57□□□□□ -1.04
USE1-204ENST00000594399 OPN1MWP04001 364 aa8.57□□□□□ -1.04
USE1-204ENST00000594399 TRAPPC2P0DI81 140 aa8.57□□□□□ -1.04
USE1-204ENST00000594399 TRAPPC2BP0DI82 140 aa8.57□□□□□ -1.04
USE1-204ENST00000594399 OPN1MW2P0DN77 364 aa8.57□□□□□ -1.04
USE1-204ENST00000594399 OPN1MW3P0DN78 364 aa8.57□□□□□ -1.04
USE1-204ENST00000594399 HOXA1P49639 335 aaPredicted RBP8.57□□□□□ -1.04
USE1-204ENST00000594399 SPCS3P61009 180 aa8.57□□□□□ -1.04
USE1-204ENST00000594399 HSPE1P61604 102 aaKnown RBP8.57□□□□□ -1.04
USE1-204ENST00000594399 CYCSP99999 105 aaKnown RBP8.57□□□□□ -1.04
USE1-204ENST00000594399 PRCDQ00LT1 54 aa8.57□□□□□ -1.04
USE1-204ENST00000594399 TNFRSF9Q07011 255 aa8.57□□□□□ -1.04
USE1-204ENST00000594399 Q8N2B8 174 aa8.57□□□□□ -1.04
USE1-204ENST00000594399 OR4D5Q8NGN0 318 aa8.57□□□□□ -1.04
USE1-204ENST00000594399 OR52E5Q8NH55 327 aa8.57□□□□□ -1.04
USE1-204ENST00000594399 FYTTD1Q96QD9 318 aaKnown RBP8.57□□□□□ -1.04
USE1-204ENST00000594399 HINT2Q9BX68 163 aa8.57□□□□□ -1.04
USE1-204ENST00000594399 PLEKHA3Q9HB20 300 aa8.57□□□□□ -1.04
USE1-204ENST00000594399 GSKIPQ9P0R6 139 aa8.57□□□□□ -1.04
USE1-204ENST00000594399 HSPB7Q9UBY9 170 aa8.57□□□□□ -1.04
USE1-204ENST00000594399 A0A1W2PN81 502 aa8.56□□□□□ -1.04
USE1-204ENST00000594399 HMX3A6NHT5 357 aa8.56□□□□□ -1.04
USE1-204ENST00000594399 CGB1A6NKQ9 187 aa8.56□□□□□ -1.04
USE1-204ENST00000594399 TEX22C9J3V5 150 aa8.56□□□□□ -1.04
USE1-204ENST00000594399 E7EUB6 86 aa8.56□□□□□ -1.04
USE1-204ENST00000594399 AP4M1O00189 453 aa8.56□□□□□ -1.04
USE1-204ENST00000594399 CHRNA7P36544 502 aa8.56□□□□□ -1.04
USE1-204ENST00000594399 NKX2-1P43699 371 aaPredicted RBP8.56□□□□□ -1.04
USE1-204ENST00000594399 VDAC2P45880 294 aaPredicted RBP8.56□□□□□ -1.04
USE1-204ENST00000594399 PDLIM3Q53GG5 364 aaPredicted RBP8.56□□□□□ -1.04
USE1-204ENST00000594399 SPINK9Q5DT21 86 aa8.56□□□□□ -1.04
USE1-204ENST00000594399 Q6ZS46 218 aa8.56□□□□□ -1.04
USE1-204ENST00000594399 MRPL41Q8IXM3 137 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms