RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 RBPMSQ93062 196 aaKnown RBP7.6□□□□□ -1.19
DDX39A-220ENST00000593008 OR2A7Q96R45 310 aa7.6□□□□□ -1.19
DDX39A-220ENST00000593008 TSNAXQ99598 290 aaKnown RBP7.6□□□□□ -1.19
DDX39A-220ENST00000593008 RANBP3Q9H6Z4 567 aaPredicted RBP7.6□□□□□ -1.19
DDX39A-220ENST00000593008 PARP11Q9NR21 331 aa7.6□□□□□ -1.19
DDX39A-220ENST00000593008 KIAA1456Q9P272 454 aa7.6□□□□□ -1.19
DDX39A-220ENST00000593008 CACNG5Q9UF02 275 aa7.6□□□□□ -1.19
DDX39A-220ENST00000593008 TET2Q6N021 2002 aaPredicted RBP7.59□□□□□ -1.19
DDX39A-220ENST00000593008 hCG_2014768A0A024R1R8 64 aa7.59□□□□□ -1.19
DDX39A-220ENST00000593008 C7orf66A4D0T2 115 aa7.59□□□□□ -1.19
DDX39A-220ENST00000593008 HMX3A6NHT5 357 aa7.59□□□□□ -1.19
DDX39A-220ENST00000593008 G3V318 75 aa7.59□□□□□ -1.19
DDX39A-220ENST00000593008 GOSR2O14653 212 aa7.59□□□□□ -1.19
DDX39A-220ENST00000593008 FGF16O43320 207 aa7.59□□□□□ -1.19
DDX39A-220ENST00000593008 SPDEFO95238 335 aa7.59□□□□□ -1.19
DDX39A-220ENST00000593008 DUS4LO95620 317 aaKnown RBP7.59□□□□□ -1.19
DDX39A-220ENST00000593008 HRASP01112 189 aa7.59□□□□□ -1.19
DDX39A-220ENST00000593008 HLA-DRB1P01911 266 aa7.59□□□□□ -1.19
DDX39A-220ENST00000593008 EGR2P11161 476 aaPredicted RBP7.59□□□□□ -1.19
DDX39A-220ENST00000593008 LGALS7P47929 136 aa7.59□□□□□ -1.19
DDX39A-220ENST00000593008 ERVK-16P61578 105 aa7.59□□□□□ -1.19
DDX39A-220ENST00000593008 CX3CL1P78423 397 aa7.59□□□□□ -1.19
DDX39A-220ENST00000593008 TNXAQ16473 311 aa7.59□□□□□ -1.19
DDX39A-220ENST00000593008 ARSJQ5FYB0 599 aaPredicted RBP7.59□□□□□ -1.19
DDX39A-220ENST00000593008 PRR31Q5SQ13 230 aa7.59□□□□□ -1.19
DDX39A-220ENST00000593008 ASPHD1Q5U4P2 390 aa7.59□□□□□ -1.19
DDX39A-220ENST00000593008 PPP1R27Q86WC6 154 aa7.59□□□□□ -1.19
DDX39A-220ENST00000593008 LGI3Q8N145 548 aa7.59□□□□□ -1.19
DDX39A-220ENST00000593008 C12orf45Q8N5I9 185 aaPredicted RBP7.59□□□□□ -1.19
DDX39A-220ENST00000593008 KLHDC1Q8N7A1 406 aa7.59□□□□□ -1.19
DDX39A-220ENST00000593008 OR2T6Q8NHC8 308 aa7.59□□□□□ -1.19
DDX39A-220ENST00000593008 RNASE11Q8TAA1 199 aaKnown RBP7.59□□□□□ -1.19
DDX39A-220ENST00000593008 CD300LFQ8TDQ1 290 aa7.59□□□□□ -1.19
DDX39A-220ENST00000593008 ABHD5Q8WTS1 349 aa7.59□□□□□ -1.19
DDX39A-220ENST00000593008 OR10C1Q96KK4 312 aa7.59□□□□□ -1.19
DDX39A-220ENST00000593008 RASL11BQ9BPW5 248 aa7.59□□□□□ -1.19
DDX39A-220ENST00000593008 ALX4Q9H161 411 aaPredicted RBP7.59□□□□□ -1.19
DDX39A-220ENST00000593008 WSB1Q9Y6I7 421 aa7.59□□□□□ -1.19
DDX39A-220ENST00000593008 VWFP04275 2813 aa7.58□□□□□ -1.2
DDX39A-220ENST00000593008 CMYA5Q8N3K9 4069 aa7.58□□□□□ -1.2
DDX39A-220ENST00000593008 A0A0B4J2A0 478 aa7.58□□□□□ -1.2
DDX39A-220ENST00000593008 C15orf61A6NNL5 157 aa7.58□□□□□ -1.2
DDX39A-220ENST00000593008 FAM25EA8MYX2 175 aa7.58□□□□□ -1.2
DDX39A-220ENST00000593008 TEX22C9J3V5 150 aa7.58□□□□□ -1.2
DDX39A-220ENST00000593008 REG1AP05451 166 aa7.58□□□□□ -1.2
DDX39A-220ENST00000593008 ANXA3P12429 323 aa7.58□□□□□ -1.2
DDX39A-220ENST00000593008 HLA-GP17693 338 aa7.58□□□□□ -1.2
DDX39A-220ENST00000593008 CXCL3P19876 107 aa7.58□□□□□ -1.2
DDX39A-220ENST00000593008 FCN2Q15485 313 aa7.58□□□□□ -1.2
DDX39A-220ENST00000593008 ECSCRQ19T08 205 aa7.58□□□□□ -1.2
DDX39A-220ENST00000593008 LCNL1Q6ZST4 164 aa7.58□□□□□ -1.2
DDX39A-220ENST00000593008 H2BFWTQ7Z2G1 175 aa7.58□□□□□ -1.2
DDX39A-220ENST00000593008 TCTEX1D1Q8N7M0 179 aa7.58□□□□□ -1.2
DDX39A-220ENST00000593008 LRTM2Q8N967 370 aa7.58□□□□□ -1.2
DDX39A-220ENST00000593008 OR10W1Q8NGF6 305 aa7.58□□□□□ -1.2
DDX39A-220ENST00000593008 ARPC1AQ92747 370 aa7.58□□□□□ -1.2
DDX39A-220ENST00000593008 FYTTD1Q96QD9 318 aaKnown RBP7.58□□□□□ -1.2
DDX39A-220ENST00000593008 HINT2Q9BX68 163 aa7.58□□□□□ -1.2
DDX39A-220ENST00000593008 OR51J1Q9H342 316 aa7.58□□□□□ -1.2
DDX39A-220ENST00000593008 SERTAD4Q9NUC0 356 aa7.58□□□□□ -1.2
DDX39A-220ENST00000593008 BET1LQ9NYM9 111 aa7.58□□□□□ -1.2
DDX39A-220ENST00000593008 SHPKQ9UHJ6 478 aa7.58□□□□□ -1.2
DDX39A-220ENST00000593008 KCNIP3Q9Y2W7 256 aa7.58□□□□□ -1.2
DDX39A-220ENST00000593008 TEX50A0A1B0GTY4 177 aa7.57□□□□□ -1.2
DDX39A-220ENST00000593008 ST8SIA3O43173 380 aa7.57□□□□□ -1.2
DDX39A-220ENST00000593008 SSNA1O43805 119 aa7.57□□□□□ -1.2
DDX39A-220ENST00000593008 CREBL2O60519 120 aaPredicted RBP7.57□□□□□ -1.2
DDX39A-220ENST00000593008 DHFRP00374 187 aa7.57□□□□□ -1.2
DDX39A-220ENST00000593008 PRH1P02810 166 aa7.57□□□□□ -1.2
DDX39A-220ENST00000593008 AREGP15514 252 aa7.57□□□□□ -1.2
DDX39A-220ENST00000593008 RPL8P62917 257 aaKnown RBP7.57□□□□□ -1.2
DDX39A-220ENST00000593008 FXYD3Q14802 87 aa7.57□□□□□ -1.2
DDX39A-220ENST00000593008 CXorf66Q5JRM2 361 aaPredicted RBP7.57□□□□□ -1.2
DDX39A-220ENST00000593008 TREML4Q6UXN2 200 aa7.57□□□□□ -1.2
DDX39A-220ENST00000593008 Q6ZNX1 250 aa7.57□□□□□ -1.2
DDX39A-220ENST00000593008 SLC35E3Q7Z769 313 aa7.57□□□□□ -1.2
DDX39A-220ENST00000593008 TEX45Q8NA69 505 aa7.57□□□□□ -1.2
DDX39A-220ENST00000593008 OR11H7Q8NGC8 314 aa7.57□□□□□ -1.2
DDX39A-220ENST00000593008 COQ8AQ8NI60 647 aa7.57□□□□□ -1.2
DDX39A-220ENST00000593008 SRSF12Q8WXF0 261 aaKnown RBP7.57□□□□□ -1.2
DDX39A-220ENST00000593008 IL22RA2Q969J5 263 aa7.57□□□□□ -1.2
DDX39A-220ENST00000593008 RRNAD1Q96FB5 475 aaKnown RBP7.57□□□□□ -1.2
DDX39A-220ENST00000593008 PHB2Q99623 299 aa7.57□□□□□ -1.2
DDX39A-220ENST00000593008 GON7Q9BXV9 100 aa7.57□□□□□ -1.2
DDX39A-220ENST00000593008 PRSS22Q9GZN4 317 aa7.57□□□□□ -1.2
DDX39A-220ENST00000593008 MAGT1Q9H0U3 335 aa7.57□□□□□ -1.2
DDX39A-220ENST00000593008 FAM212BQ9NTI7 297 aaPredicted RBP7.57□□□□□ -1.2
DDX39A-220ENST00000593008 MGAT4CQ9UBM8 478 aa7.57□□□□□ -1.2
DDX39A-220ENST00000593008 OR51B2Q9Y5P1 312 aa7.57□□□□□ -1.2
DDX39A-220ENST00000593008 C13orf42A0A1B0GVH6 325 aa7.56□□□□□ -1.2
DDX39A-220ENST00000593008 MSGN1A6NI15 193 aa7.56□□□□□ -1.2
DDX39A-220ENST00000593008 SNRPGP15A8MWD9 76 aa7.56□□□□□ -1.2
DDX39A-220ENST00000593008 M0QZ24 198 aa7.56□□□□□ -1.2
DDX39A-220ENST00000593008 SOX15O60248 233 aa7.56□□□□□ -1.2
DDX39A-220ENST00000593008 PRAF2O60831 178 aa7.56□□□□□ -1.2
DDX39A-220ENST00000593008 RBMXL2O75526 392 aaKnown RBP7.56□□□□□ -1.2
DDX39A-220ENST00000593008 B3GALNT1O75752 331 aa7.56□□□□□ -1.2
DDX39A-220ENST00000593008 ATG12O94817 140 aa7.56□□□□□ -1.2
DDX39A-220ENST00000593008 CNIH1O95406 144 aa7.56□□□□□ -1.2
DDX39A-220ENST00000593008 TSPAN15O95858 294 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms