RNA–Protein interactions for RNA: ENST00000591216.1

PSMD8-204, Transcript of proteasome 26S subunit, non-ATPase 8, human

TSL 3

Gene PSMD8, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD8-204	ENST00000591216	CD300LF	Q8TDQ1	290 aa		13.65	□□□□□ -0.22
PSMD8-204	ENST00000591216	BORCS5	Q969J3	196 aa		13.65	□□□□□ -0.22
PSMD8-204	ENST00000591216	SIGLEC8	Q9NYZ4	499 aa		13.65	□□□□□ -0.22
PSMD8-204	ENST00000591216	SMAD5-AS1	Q9Y6J3	95 aa		13.65	□□□□□ -0.22
PSMD8-204	ENST00000591216	NDUFB8	O95169	186 aa		13.64	□□□□□ -0.23
PSMD8-204	ENST00000591216	CSN3	P07498	182 aa		13.64	□□□□□ -0.23
PSMD8-204	ENST00000591216	FGF2	P09038	288 aa		13.64	□□□□□ -0.23
PSMD8-204	ENST00000591216	ZNF182	P17025	639 aa	Predicted RBP	13.64	□□□□□ -0.23
PSMD8-204	ENST00000591216	F2R	P25116	425 aa		13.64	□□□□□ -0.23
PSMD8-204	ENST00000591216	MECP2	P51608	486 aa	Known RBP	13.64	□□□□□ -0.23
PSMD8-204	ENST00000591216	ZNF585B	Q52M93	769 aa		13.64	□□□□□ -0.23
PSMD8-204	ENST00000591216		Q8N1Y9	231 aa		13.64	□□□□□ -0.23
PSMD8-204	ENST00000591216	MRPS26	Q9BYN8	205 aa	Known RBP	13.64	□□□□□ -0.23
PSMD8-204	ENST00000591216	COMMD9	Q9P000	198 aa		13.64	□□□□□ -0.23
PSMD8-204	ENST00000591216	RLN1	P04808	185 aa		13.63	□□□□□ -0.23
PSMD8-204	ENST00000591216	RPEL1	Q2QD12	228 aa		13.63	□□□□□ -0.23
PSMD8-204	ENST00000591216	C15orf32	Q32M92	178 aa		13.63	□□□□□ -0.23
PSMD8-204	ENST00000591216	CADM3	Q8N126	398 aa		13.63	□□□□□ -0.23
PSMD8-204	ENST00000591216	ASCL2	Q99929	193 aa		13.63	□□□□□ -0.23
PSMD8-204	ENST00000591216	TMEM140	Q9NV12	185 aa		13.63	□□□□□ -0.23
PSMD8-204	ENST00000591216	FBXL7	Q9UJT9	491 aa		13.63	□□□□□ -0.23
PSMD8-204	ENST00000591216	IGLC7	A0M8Q6	106 aa		13.62	□□□□□ -0.23
PSMD8-204	ENST00000591216	GPR31	O00270	319 aa		13.62	□□□□□ -0.23
PSMD8-204	ENST00000591216	RCVRN	P35243	200 aa		13.62	□□□□□ -0.23
PSMD8-204	ENST00000591216	TATDN3	Q17R31	274 aa		13.62	□□□□□ -0.23
PSMD8-204	ENST00000591216	MZT2A	Q6P582	158 aa		13.62	□□□□□ -0.23
PSMD8-204	ENST00000591216	ADAMTSL5	Q6ZMM2	481 aa		13.62	□□□□□ -0.23
PSMD8-204	ENST00000591216	FCAMR	Q8WWV6	532 aa		13.62	□□□□□ -0.23
PSMD8-204	ENST00000591216	DGCR14	Q96DF8	476 aa	Known RBP	13.62	□□□□□ -0.23
PSMD8-204	ENST00000591216	RSRP1	Q9BUV0	290 aa		13.62	□□□□□ -0.23
PSMD8-204	ENST00000591216	HRASLS	Q9HDD0	168 aa		13.62	□□□□□ -0.23
PSMD8-204	ENST00000591216	STARD9	Q9P2P6	4700 aa		13.62	□□□□□ -0.23
PSMD8-204	ENST00000591216	IGLV11-55	A0A075B6I3	123 aa		13.61	□□□□□ -0.23
PSMD8-204	ENST00000591216	DPPA5	A6NC42	116 aa		13.61	□□□□□ -0.23
PSMD8-204	ENST00000591216	REG1A	P05451	166 aa		13.61	□□□□□ -0.23
PSMD8-204	ENST00000591216	RPA2	P15927	270 aa		13.61	□□□□□ -0.23
PSMD8-204	ENST00000591216	LPAR6	P43657	344 aa		13.61	□□□□□ -0.23
PSMD8-204	ENST00000591216	SBSPON	Q8IVN8	264 aa		13.61	□□□□□ -0.23
PSMD8-204	ENST00000591216	CMTM1	Q8IZ96	169 aa		13.61	□□□□□ -0.23
PSMD8-204	ENST00000591216	AP3S1	Q92572	193 aa		13.61	□□□□□ -0.23
PSMD8-204	ENST00000591216	SRSF8	Q9BRL6	282 aa	Known RBP	13.61	□□□□□ -0.23
PSMD8-204	ENST00000591216	THAP7	Q9BT49	309 aa	Predicted RBP	13.61	□□□□□ -0.23
PSMD8-204	ENST00000591216	MIXL1	Q9H2W2	232 aa		13.61	□□□□□ -0.23
PSMD8-204	ENST00000591216	KLK11	Q9UBX7	282 aa		13.61	□□□□□ -0.23
PSMD8-204	ENST00000591216	TEX50	A0A1B0GTY4	177 aa		13.6	□□□□□ -0.23
PSMD8-204	ENST00000591216	MARCH11	A6NNE9	402 aa		13.6	□□□□□ -0.23
PSMD8-204	ENST00000591216	PPP5D1	E7EU14	171 aa		13.6	□□□□□ -0.23
PSMD8-204	ENST00000591216	TPPP	O94811	219 aa		13.6	□□□□□ -0.23
PSMD8-204	ENST00000591216	UCP3	P55916	312 aa		13.6	□□□□□ -0.23
PSMD8-204	ENST00000591216	FAM209B	Q5JX69	171 aa		13.6	□□□□□ -0.23
PSMD8-204	ENST00000591216	NBEAL2	Q6ZNJ1	2754 aa		13.6	□□□□□ -0.23
PSMD8-204	ENST00000591216	DMBX1	Q8NFW5	382 aa		13.6	□□□□□ -0.23
PSMD8-204	ENST00000591216	CCDC140	Q96MF4	163 aa		13.6	□□□□□ -0.23
PSMD8-204	ENST00000591216	ABHD1	Q96SE0	405 aa		13.6	□□□□□ -0.23
PSMD8-204	ENST00000591216	FAM25A	B3EWG3	89 aa		13.59	□□□□□ -0.23
PSMD8-204	ENST00000591216	FAM25C	B3EWG5	89 aa		13.59	□□□□□ -0.23
PSMD8-204	ENST00000591216	FAM25G	B3EWG6	89 aa		13.59	□□□□□ -0.23
PSMD8-204	ENST00000591216	HIST1H1B	P16401	226 aa	Known RBP	13.59	□□□□□ -0.23
PSMD8-204	ENST00000591216	TSPAN5	P62079	268 aa		13.59	□□□□□ -0.23
PSMD8-204	ENST00000591216	SPCS2	Q15005	226 aa		13.59	□□□□□ -0.23
PSMD8-204	ENST00000591216	LPCAT3	Q6P1A2	487 aa		13.59	□□□□□ -0.23
PSMD8-204	ENST00000591216	GPR141	Q7Z602	305 aa		13.59	□□□□□ -0.23
PSMD8-204	ENST00000591216	OR10W1	Q8NGF6	305 aa		13.59	□□□□□ -0.23
PSMD8-204	ENST00000591216	OR52I2	Q8NH67	350 aa		13.59	□□□□□ -0.23
PSMD8-204	ENST00000591216	WWC2-AS2	Q96NR7	200 aa		13.59	□□□□□ -0.23
PSMD8-204	ENST00000591216	COMMD5	Q9GZQ3	224 aa		13.59	□□□□□ -0.23
PSMD8-204	ENST00000591216	FAM212B	Q9NTI7	297 aa	Predicted RBP	13.59	□□□□□ -0.23
PSMD8-204	ENST00000591216	EXTL2	Q9UBQ6	330 aa		13.59	□□□□□ -0.23
PSMD8-204	ENST00000591216	MTFP1	Q9UDX5	166 aa		13.59	□□□□□ -0.23
PSMD8-204	ENST00000591216		U3KQK5	164 aa		13.59	□□□□□ -0.23
PSMD8-204	ENST00000591216	IZUMO1R	A6ND01	250 aa		13.58	□□□□□ -0.24
PSMD8-204	ENST00000591216		M0QYG6	137 aa		13.58	□□□□□ -0.24
PSMD8-204	ENST00000591216	OR2C1	O95371	312 aa		13.58	□□□□□ -0.24
PSMD8-204	ENST00000591216	DHFR	P00374	187 aa		13.58	□□□□□ -0.24
PSMD8-204	ENST00000591216	IGHV3-23	P01764	117 aa		13.58	□□□□□ -0.24
PSMD8-204	ENST00000591216	HLA-A	P01891	365 aa	Known RBP	13.58	□□□□□ -0.24
PSMD8-204	ENST00000591216	FRMD6-AS1	P0C7T7	363 aa		13.58	□□□□□ -0.24
PSMD8-204	ENST00000591216	PHLDA2	Q53GA4	152 aa		13.58	□□□□□ -0.24
PSMD8-204	ENST00000591216	LHFPL1	Q86WI0	220 aa		13.58	□□□□□ -0.24
PSMD8-204	ENST00000591216	QTRT1	Q9BXR0	403 aa	Known RBP	13.58	□□□□□ -0.24
PSMD8-204	ENST00000591216	NDUFA4L2	Q9NRX3	87 aa		13.58	□□□□□ -0.24
PSMD8-204	ENST00000591216	C19orf73	Q9NVV2	129 aa		13.58	□□□□□ -0.24
PSMD8-204	ENST00000591216	PEMT	Q9UBM1	199 aa		13.58	□□□□□ -0.24
PSMD8-204	ENST00000591216		S4R3C0	116 aa		13.58	□□□□□ -0.24
PSMD8-204	ENST00000591216	RYR2	Q92736	4967 aa		13.57	□□□□□ -0.24
PSMD8-204	ENST00000591216		A8MZ25	164 aa		13.57	□□□□□ -0.24
PSMD8-204	ENST00000591216		H0Y980	276 aa		13.57	□□□□□ -0.24
PSMD8-204	ENST00000591216	GGCT	O75223	188 aa	Known RBP	13.57	□□□□□ -0.24
PSMD8-204	ENST00000591216	KRAS	P01116	189 aa		13.57	□□□□□ -0.24
PSMD8-204	ENST00000591216	IGKV1-39	P01597	117 aa		13.57	□□□□□ -0.24
PSMD8-204	ENST00000591216	IGKV1D-39	P04432	117 aa		13.57	□□□□□ -0.24
PSMD8-204	ENST00000591216	TRAPPC2	P0DI81	140 aa		13.57	□□□□□ -0.24
PSMD8-204	ENST00000591216	TRAPPC2B	P0DI82	140 aa		13.57	□□□□□ -0.24
PSMD8-204	ENST00000591216	EDN2	P20800	178 aa		13.57	□□□□□ -0.24
PSMD8-204	ENST00000591216	PTBP1	P26599	531 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
PSMD8-204	ENST00000591216	G6PC	P35575	357 aa		13.57	□□□□□ -0.24
PSMD8-204	ENST00000591216	WT1-AS	Q06250	92 aa		13.57	□□□□□ -0.24
PSMD8-204	ENST00000591216	THOC7	Q6I9Y2	204 aa	Known RBP	13.57	□□□□□ -0.24
PSMD8-204	ENST00000591216	CLEC19A	Q6UXS0	136 aa		13.57	□□□□□ -0.24
PSMD8-204	ENST00000591216	TBC1D26	Q86UD7	250 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms