RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 OR5M8Q8NGP6 311 aa13.16□□□□□ -0.3
GCDH-213ENST00000590627 RNASE11Q8TAA1 199 aaKnown RBP13.16□□□□□ -0.3
GCDH-213ENST00000590627 TNFRSF19Q9NS68 423 aa13.16□□□□□ -0.3
GCDH-213ENST00000590627 METTL1Q9UBP6 276 aaKnown RBP13.16□□□□□ -0.3
GCDH-213ENST00000590627 HMX3A6NHT5 357 aa13.15□□□□□ -0.3
GCDH-213ENST00000590627 NCBP2LA6PVI3 153 aaKnown RBP13.15□□□□□ -0.3
GCDH-213ENST00000590627 M0QZ24 198 aa13.15□□□□□ -0.3
GCDH-213ENST00000590627 OR9G9P0C7N8 305 aa13.15□□□□□ -0.3
GCDH-213ENST00000590627 SRSF4Q08170 494 aaKnown RBP13.15□□□□□ -0.3
GCDH-213ENST00000590627 FCN2Q15485 313 aa13.15□□□□□ -0.3
GCDH-213ENST00000590627 PRSS8Q16651 343 aa13.15□□□□□ -0.3
GCDH-213ENST00000590627 PPP1R27Q86WC6 154 aa13.15□□□□□ -0.3
GCDH-213ENST00000590627 FOXRED2Q8IWF2 684 aa13.15□□□□□ -0.3
GCDH-213ENST00000590627 C5orf56Q8N8D9 126 aa13.15□□□□□ -0.3
GCDH-213ENST00000590627 SPIN2AQ99865 258 aa13.15□□□□□ -0.3
GCDH-213ENST00000590627 SPIN2BQ9BPZ2 258 aa13.15□□□□□ -0.3
GCDH-213ENST00000590627 FBXL15Q9H469 300 aa13.15□□□□□ -0.3
GCDH-213ENST00000590627 TRAV3A0A0B4J244 114 aa13.14□□□□□ -0.31
GCDH-213ENST00000590627 MPTX1A8MV57 137 aa13.14□□□□□ -0.31
GCDH-213ENST00000590627 CCSO14618 274 aa13.14□□□□□ -0.31
GCDH-213ENST00000590627 GOSR2O14653 212 aa13.14□□□□□ -0.31
GCDH-213ENST00000590627 PITX3O75364 302 aa13.14□□□□□ -0.31
GCDH-213ENST00000590627 SNAPC5O75971 98 aa13.14□□□□□ -0.31
GCDH-213ENST00000590627 AMY1AP04745 511 aa13.14□□□□□ -0.31
GCDH-213ENST00000590627 TRAPPC2P0DI81 140 aa13.14□□□□□ -0.31
GCDH-213ENST00000590627 TRAPPC2BP0DI82 140 aa13.14□□□□□ -0.31
GCDH-213ENST00000590627 SMCO1Q147U7 214 aa13.14□□□□□ -0.31
GCDH-213ENST00000590627 IZUMO4Q1ZYL8 232 aa13.14□□□□□ -0.31
GCDH-213ENST00000590627 GSG1LQ6UXU4 331 aa13.14□□□□□ -0.31
GCDH-213ENST00000590627 ZNF429Q86V71 674 aa13.14□□□□□ -0.31
GCDH-213ENST00000590627 MMD2Q8IY49 270 aa13.14□□□□□ -0.31
GCDH-213ENST00000590627 OR11H7Q8NGC8 314 aa13.14□□□□□ -0.31
GCDH-213ENST00000590627 CHAC2Q8WUX2 184 aa13.14□□□□□ -0.31
GCDH-213ENST00000590627 OR10C1Q96KK4 312 aa13.14□□□□□ -0.31
GCDH-213ENST00000590627 ZNF430Q9H8G1 570 aaPredicted RBP13.14□□□□□ -0.31
GCDH-213ENST00000590627 TPSG1Q9NRR2 321 aa13.14□□□□□ -0.31
GCDH-213ENST00000590627 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.14□□□□□ -0.31
GCDH-213ENST00000590627 TMEM14BQ9NUH8 114 aa13.14□□□□□ -0.31
GCDH-213ENST00000590627 MGAT4CQ9UBM8 478 aa13.14□□□□□ -0.31
GCDH-213ENST00000590627 CACNG5Q9UF02 275 aa13.14□□□□□ -0.31
GCDH-213ENST00000590627 PRNDQ9UKY0 176 aa13.14□□□□□ -0.31
GCDH-213ENST00000590627 CHST1O43916 411 aa13.13□□□□□ -0.31
GCDH-213ENST00000590627 HLA-DRB1P01911 266 aa13.13□□□□□ -0.31
GCDH-213ENST00000590627 CXCL3P19876 107 aa13.13□□□□□ -0.31
GCDH-213ENST00000590627 MAS1LP35410 378 aa13.13□□□□□ -0.31
GCDH-213ENST00000590627 H2BFSP57053 126 aa13.13□□□□□ -0.31
GCDH-213ENST00000590627 RPL8P62917 257 aaKnown RBP13.13□□□□□ -0.31
GCDH-213ENST00000590627 IAH1Q2TAA2 248 aaPredicted RBP13.13□□□□□ -0.31
GCDH-213ENST00000590627 THOC7Q6I9Y2 204 aaKnown RBP13.13□□□□□ -0.31
GCDH-213ENST00000590627 OR4A16Q8NH70 328 aa13.13□□□□□ -0.31
GCDH-213ENST00000590627 C2orf50Q96LR7 162 aa13.13□□□□□ -0.31
GCDH-213ENST00000590627 RANBP3Q9H6Z4 567 aaPredicted RBP13.13□□□□□ -0.31
GCDH-213ENST00000590627 CACFD1Q9UGQ2 172 aa13.13□□□□□ -0.31
GCDH-213ENST00000590627 FOXA2Q9Y261 457 aaPredicted RBP13.13□□□□□ -0.31
GCDH-213ENST00000590627 RNF114Q9Y508 228 aa13.13□□□□□ -0.31
GCDH-213ENST00000590627 C13orf42A0A1B0GVH6 325 aa13.12□□□□□ -0.31
GCDH-213ENST00000590627 C5orf51A6NDU8 294 aa13.12□□□□□ -0.31
GCDH-213ENST00000590627 C15orf61A6NNL5 157 aa13.12□□□□□ -0.31
GCDH-213ENST00000590627 FCN1O00602 326 aa13.12□□□□□ -0.31
GCDH-213ENST00000590627 GPR137BO60478 399 aa13.12□□□□□ -0.31
GCDH-213ENST00000590627 BCAP31P51572 246 aa13.12□□□□□ -0.31
GCDH-213ENST00000590627 PJVKQ0ZLH3 352 aa13.12□□□□□ -0.31
GCDH-213ENST00000590627 IL15RAQ13261 267 aa13.12□□□□□ -0.31
GCDH-213ENST00000590627 PLGLAQ15195 96 aa13.12□□□□□ -0.31
GCDH-213ENST00000590627 ZBTB8BQ8NAP8 495 aaPredicted RBP13.12□□□□□ -0.31
GCDH-213ENST00000590627 OR52E5Q8NH55 327 aa13.12□□□□□ -0.31
GCDH-213ENST00000590627 LINC01006Q8NI28 216 aa13.12□□□□□ -0.31
GCDH-213ENST00000590627 ASB13Q8WXK3 278 aa13.12□□□□□ -0.31
GCDH-213ENST00000590627 RASL11BQ9BPW5 248 aa13.12□□□□□ -0.31
GCDH-213ENST00000590627 FKBP11Q9NYL4 201 aa13.12□□□□□ -0.31
GCDH-213ENST00000590627 ZNF257Q9Y2Q1 563 aa13.12□□□□□ -0.31
GCDH-213ENST00000590627 NSG2Q9Y328 171 aa13.12□□□□□ -0.31
GCDH-213ENST00000590627 hCG_2014768A0A024R1R8 64 aa13.11□□□□□ -0.31
GCDH-213ENST00000590627 FAM25EA8MYX2 175 aa13.11□□□□□ -0.31
GCDH-213ENST00000590627 SIX6O95475 246 aa13.11□□□□□ -0.31
GCDH-213ENST00000590627 KRTAP10-3P60369 221 aa13.11□□□□□ -0.31
GCDH-213ENST00000590627 SSBP2P81877 361 aaPredicted RBP13.11□□□□□ -0.31
GCDH-213ENST00000590627 CYCSP99999 105 aaKnown RBP13.11□□□□□ -0.31
GCDH-213ENST00000590627 ZNF562Q6V9R5 426 aa13.11□□□□□ -0.31
GCDH-213ENST00000590627 OR4D5Q8NGN0 318 aa13.11□□□□□ -0.31
GCDH-213ENST00000590627 OR5B3Q8NH48 314 aa13.11□□□□□ -0.31
GCDH-213ENST00000590627 NMES1Q9C002 83 aa13.11□□□□□ -0.31
GCDH-213ENST00000590627 FAM90A26D6RGX4 464 aa13.1□□□□□ -0.31
GCDH-213ENST00000590627 PROK1P58294 105 aa13.1□□□□□ -0.31
GCDH-213ENST00000590627 OR2B8PP59922 312 aa13.1□□□□□ -0.31
GCDH-213ENST00000590627 HSPE1P61604 102 aaKnown RBP13.1□□□□□ -0.31
GCDH-213ENST00000590627 OR1S1Q8NH92 325 aa13.1□□□□□ -0.31
GCDH-213ENST00000590627 FYTTD1Q96QD9 318 aaKnown RBP13.1□□□□□ -0.31
GCDH-213ENST00000590627 QTRT1Q9BXR0 403 aaKnown RBP13.1□□□□□ -0.31
GCDH-213ENST00000590627 ZNF436Q9C0F3 470 aaPredicted RBP13.1□□□□□ -0.31
GCDH-213ENST00000590627 HSPB7Q9UBY9 170 aa13.1□□□□□ -0.31
GCDH-213ENST00000590627 OR51B2Q9Y5P1 312 aa13.1□□□□□ -0.31
GCDH-213ENST00000590627 TNCP24821 2201 aa13.1□□□□□ -0.31
GCDH-213ENST00000590627 IGHV7-81A0A0B4J1V7 117 aa13.09□□□□□ -0.31
GCDH-213ENST00000590627 ST8SIA3O43173 380 aa13.09□□□□□ -0.31
GCDH-213ENST00000590627 RBMXL2O75526 392 aaKnown RBP13.09□□□□□ -0.31
GCDH-213ENST00000590627 ACTL6BO94805 426 aa13.09□□□□□ -0.31
GCDH-213ENST00000590627 CA2P00918 260 aa13.09□□□□□ -0.31
GCDH-213ENST00000590627 GIPP09681 153 aaPredicted RBP13.09□□□□□ -0.31
GCDH-213ENST00000590627 SPCS3P61009 180 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms