RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 CGAP01215 116 aa12.66□□□□□ -0.38
CIRBP-228ENST00000590347 FABP6P51161 128 aa12.66□□□□□ -0.38
CIRBP-228ENST00000590347 MEF2CQ06413 473 aaPredicted RBP12.66□□□□□ -0.38
CIRBP-228ENST00000590347 OR8B8Q15620 311 aa12.66□□□□□ -0.38
CIRBP-228ENST00000590347 VWC2Q2TAL6 325 aa12.66□□□□□ -0.38
CIRBP-228ENST00000590347 OR5B3Q8NH48 314 aa12.66□□□□□ -0.38
CIRBP-228ENST00000590347 SGK494Q96LW2 274 aa12.66□□□□□ -0.38
CIRBP-228ENST00000590347 ARFGEF3Q5TH69 2177 aa12.66□□□□□ -0.38
CIRBP-228ENST00000590347 IGLC1P0CG04 106 aa12.66□□□□□ -0.38
CIRBP-228ENST00000590347 SRD5A2P31213 254 aa12.66□□□□□ -0.38
CIRBP-228ENST00000590347 TM4SF20Q53R12 229 aa12.66□□□□□ -0.38
CIRBP-228ENST00000590347 PNKDQ8N490 385 aa12.66□□□□□ -0.38
CIRBP-228ENST00000590347 LINC00479Q96M42 142 aa12.66□□□□□ -0.38
CIRBP-228ENST00000590347 NPVFQ9HCQ7 196 aa12.66□□□□□ -0.38
CIRBP-228ENST00000590347 FASLGP48023 281 aa12.66□□□□□ -0.38
CIRBP-228ENST00000590347 NANOS1Q8WY41 292 aaKnown RBP12.66□□□□□ -0.38
CIRBP-228ENST00000590347 GNB1LQ9BYB4 327 aa12.66□□□□□ -0.38
CIRBP-228ENST00000590347 STRADBQ9C0K7 418 aa12.66□□□□□ -0.38
CIRBP-228ENST00000590347 ZFHX4Q86UP3 3567 aa12.65□□□□□ -0.38
CIRBP-228ENST00000590347 LOC102723996A0A087X1L8 192 aa12.65□□□□□ -0.38
CIRBP-228ENST00000590347 SPAARA0A1B0GVQ0 90 aa12.65□□□□□ -0.38
CIRBP-228ENST00000590347 PRB4P10163 310 aaPredicted RBP12.65□□□□□ -0.38
CIRBP-228ENST00000590347 AZU1P20160 251 aa12.65□□□□□ -0.38
CIRBP-228ENST00000590347 RPL30P62888 115 aaKnown RBP12.65□□□□□ -0.38
CIRBP-228ENST00000590347 RNPS1Q15287 305 aaKnown RBP12.65□□□□□ -0.38
CIRBP-228ENST00000590347 SLC25A34Q6PIV7 304 aa12.65□□□□□ -0.38
CIRBP-228ENST00000590347 BHLHA15Q7RTS1 189 aaPredicted RBP12.65□□□□□ -0.38
CIRBP-228ENST00000590347 OR1L3Q8NH93 324 aa12.65□□□□□ -0.38
CIRBP-228ENST00000590347 SF3B5Q9BWJ5 86 aaKnown RBP12.65□□□□□ -0.38
CIRBP-228ENST00000590347 ABI3Q9P2A4 366 aa12.65□□□□□ -0.38
CIRBP-228ENST00000590347 PI4KAP42356 2102 aa12.65□□□□□ -0.38
CIRBP-228ENST00000590347 KIR2DS1A0A191URI9 304 aa12.65□□□□□ -0.38
CIRBP-228ENST00000590347 LMO7DNF2Z398 122 aa12.65□□□□□ -0.38
CIRBP-228ENST00000590347 PIAS2O75928 621 aa12.65□□□□□ -0.38
CIRBP-228ENST00000590347 KIR2DS4P43632 304 aa12.65□□□□□ -0.38
CIRBP-228ENST00000590347 MFAP2P55001 183 aa12.65□□□□□ -0.38
CIRBP-228ENST00000590347 KIR2DS1Q14954 304 aa12.65□□□□□ -0.38
CIRBP-228ENST00000590347 PDLIM3Q53GG5 364 aaPredicted RBP12.65□□□□□ -0.38
CIRBP-228ENST00000590347 LSM4Q9Y4Z0 139 aaKnown RBP12.65□□□□□ -0.38
CIRBP-228ENST00000590347 ASPMQ8IZT6 3477 aa12.65□□□□□ -0.39
CIRBP-228ENST00000590347 IGHV3-13P01766 116 aa12.64□□□□□ -0.39
CIRBP-228ENST00000590347 IGHV3-7P01780 117 aa12.64□□□□□ -0.39
CIRBP-228ENST00000590347 TFF1P04155 84 aa12.64□□□□□ -0.39
CIRBP-228ENST00000590347 OR10J4P0C629 311 aa12.64□□□□□ -0.39
CIRBP-228ENST00000590347 CEACAM3P40198 252 aa12.64□□□□□ -0.39
CIRBP-228ENST00000590347 GNG4P50150 75 aa12.64□□□□□ -0.39
CIRBP-228ENST00000590347 NXPH1P58417 271 aa12.64□□□□□ -0.39
CIRBP-228ENST00000590347 FAM71F2Q6NXP2 309 aa12.64□□□□□ -0.39
CIRBP-228ENST00000590347 VWA1Q6PCB0 445 aa12.64□□□□□ -0.39
CIRBP-228ENST00000590347 DRAM1Q8N682 238 aa12.64□□□□□ -0.39
CIRBP-228ENST00000590347 OR4P4Q8NGL7 312 aa12.64□□□□□ -0.39
CIRBP-228ENST00000590347 MRPL27Q9P0M9 148 aaKnown RBP12.64□□□□□ -0.39
CIRBP-228ENST00000590347 TIMM9Q9Y5J7 89 aa12.64□□□□□ -0.39
CIRBP-228ENST00000590347 C2orf70A6NJV1 201 aa12.64□□□□□ -0.39
CIRBP-228ENST00000590347 NTF4P34130 210 aa12.64□□□□□ -0.39
CIRBP-228ENST00000590347 GDF5OSQ5U4N7 250 aa12.64□□□□□ -0.39
CIRBP-228ENST00000590347 C19orf35Q6ZS72 473 aa12.64□□□□□ -0.39
CIRBP-228ENST00000590347 SPACA3Q8IXA5 215 aa12.64□□□□□ -0.39
CIRBP-228ENST00000590347 TMEM45BQ96B21 275 aa12.64□□□□□ -0.39
CIRBP-228ENST00000590347 PERPQ96FX8 193 aa12.64□□□□□ -0.39
CIRBP-228ENST00000590347 TMEM238LA0A1B0GVL6 79 aa12.64□□□□□ -0.39
CIRBP-228ENST00000590347 PMS2P5A8MQ11 134 aa12.64□□□□□ -0.39
CIRBP-228ENST00000590347 G3V4G9 280 aa12.64□□□□□ -0.39
CIRBP-228ENST00000590347 TRIP6Q15654 476 aaKnown RBP12.64□□□□□ -0.39
CIRBP-228ENST00000590347 LTC4SQ16873 150 aa12.64□□□□□ -0.39
CIRBP-228ENST00000590347 OR10J3Q5JRS4 329 aa12.64□□□□□ -0.39
CIRBP-228ENST00000590347 LINC00696Q6ZRV3 163 aa12.64□□□□□ -0.39
CIRBP-228ENST00000590347 NPIPB13A6NJU9 1138 aa12.63□□□□□ -0.39
CIRBP-228ENST00000590347 NPIPB4C9JG80 1138 aa12.63□□□□□ -0.39
CIRBP-228ENST00000590347 PPIAL4GP0DN37 164 aa12.63□□□□□ -0.39
CIRBP-228ENST00000590347 CX3CL1P78423 397 aa12.63□□□□□ -0.39
CIRBP-228ENST00000590347 VKORC1L1Q8N0U8 176 aa12.63□□□□□ -0.39
CIRBP-228ENST00000590347 Q8N7P7 452 aa12.63□□□□□ -0.39
CIRBP-228ENST00000590347 TNFRSF19Q9NS68 423 aa12.63□□□□□ -0.39
CIRBP-228ENST00000590347 MRPS17Q9Y2R5 130 aaKnown RBP12.63□□□□□ -0.39
CIRBP-228ENST00000590347 IGHV1OR21-1A0A087WYE8 117 aa12.63□□□□□ -0.39
CIRBP-228ENST00000590347 AHRRA9YTQ3 701 aa12.63□□□□□ -0.39
CIRBP-228ENST00000590347 NEURL1O76050 574 aa12.63□□□□□ -0.39
CIRBP-228ENST00000590347 RBPJQ06330 500 aa12.63□□□□□ -0.39
CIRBP-228ENST00000590347 LPAL2Q16609 132 aa12.63□□□□□ -0.39
CIRBP-228ENST00000590347 TRAT1Q6PIZ9 186 aa12.63□□□□□ -0.39
CIRBP-228ENST00000590347 AP1S3Q96PC3 154 aa12.63□□□□□ -0.39
CIRBP-228ENST00000590347 CDX2Q99626 313 aaPredicted RBP12.63□□□□□ -0.39
CIRBP-228ENST00000590347 ZNF355PQ9NSJ1 428 aa12.63□□□□□ -0.39
CIRBP-228ENST00000590347 C17orf98A8MV24 154 aa12.62□□□□□ -0.39
CIRBP-228ENST00000590347 ZNF331Q9NQX6 463 aaPredicted RBP12.62□□□□□ -0.39
CIRBP-228ENST00000590347 LRP4O75096 1905 aa12.62□□□□□ -0.39
CIRBP-228ENST00000590347 PRR14LQ5THK1 2151 aa12.62□□□□□ -0.39
CIRBP-228ENST00000590347 CXCL12P48061 93 aa12.62□□□□□ -0.39
CIRBP-228ENST00000590347 ZNF441Q8N8Z8 693 aa12.62□□□□□ -0.39
CIRBP-228ENST00000590347 FGF21Q9NSA1 209 aa12.62□□□□□ -0.39
CIRBP-228ENST00000590347 TRAPPC2LQ9UL33 140 aa12.62□□□□□ -0.39
CIRBP-228ENST00000590347 TNCP24821 2201 aa12.62□□□□□ -0.39
CIRBP-228ENST00000590347 A0A096LPE4 126 aa12.62□□□□□ -0.39
CIRBP-228ENST00000590347 hCG_38984A0A1B0GV85 526 aa12.62□□□□□ -0.39
CIRBP-228ENST00000590347 A0A1W2PPZ6 126 aa12.62□□□□□ -0.39
CIRBP-228ENST00000590347 DEFB108AA8MXU0 73 aa12.62□□□□□ -0.39
CIRBP-228ENST00000590347 C10orf142B7Z368 130 aa12.62□□□□□ -0.39
CIRBP-228ENST00000590347 TRAPPC2LH3BP13 241 aa12.62□□□□□ -0.39
CIRBP-228ENST00000590347 KLK10O43240 276 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms