RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 TNXAQ16473 311 aa9.5□□□□□ -0.89
APOC1-206ENST00000590334 C19orf54Q5BKX5 351 aa9.5□□□□□ -0.89
APOC1-206ENST00000590334 Q6ZRM9 215 aa9.5□□□□□ -0.89
APOC1-206ENST00000590334 ZNF429Q86V71 674 aa9.5□□□□□ -0.89
APOC1-206ENST00000590334 MINDY2Q8NBR6 621 aa9.5□□□□□ -0.89
APOC1-206ENST00000590334 SGMS2Q8NHU3 365 aa9.5□□□□□ -0.89
APOC1-206ENST00000590334 CHPT1Q8WUD6 406 aa9.5□□□□□ -0.89
APOC1-206ENST00000590334 TMEM158Q8WZ71 300 aa9.5□□□□□ -0.89
APOC1-206ENST00000590334 ARPC1AQ92747 370 aa9.5□□□□□ -0.89
APOC1-206ENST00000590334 GPR146Q96CH1 333 aa9.5□□□□□ -0.89
APOC1-206ENST00000590334 PHB2Q99623 299 aa9.5□□□□□ -0.89
APOC1-206ENST00000590334 WNT10AQ9GZT5 417 aa9.5□□□□□ -0.89
APOC1-206ENST00000590334 GPN1Q9HCN4 374 aaPredicted RBP9.5□□□□□ -0.89
APOC1-206ENST00000590334 COA4Q9NYJ1 87 aa9.5□□□□□ -0.89
APOC1-206ENST00000590334 FKBP11Q9NYL4 201 aa9.5□□□□□ -0.89
APOC1-206ENST00000590334 PRNDQ9UKY0 176 aa9.5□□□□□ -0.89
APOC1-206ENST00000590334 ZNF257Q9Y2Q1 563 aa9.5□□□□□ -0.89
APOC1-206ENST00000590334 FBXO7Q9Y3I1 522 aa9.5□□□□□ -0.89
APOC1-206ENST00000590334 TMED3Q9Y3Q3 217 aa9.5□□□□□ -0.89
APOC1-206ENST00000590334 TNCP24821 2201 aa9.5□□□□□ -0.89
APOC1-206ENST00000590334 C7orf66A4D0T2 115 aa9.49□□□□□ -0.89
APOC1-206ENST00000590334 CGB1A6NKQ9 187 aa9.49□□□□□ -0.89
APOC1-206ENST00000590334 ACTL6BO94805 426 aa9.49□□□□□ -0.89
APOC1-206ENST00000590334 CNIH1O95406 144 aa9.49□□□□□ -0.89
APOC1-206ENST00000590334 MDKP21741 143 aaPredicted RBP9.49□□□□□ -0.89
APOC1-206ENST00000590334 PROK1P58294 105 aa9.49□□□□□ -0.89
APOC1-206ENST00000590334 OR2B8PP59922 312 aa9.49□□□□□ -0.89
APOC1-206ENST00000590334 GNB1P62873 340 aa9.49□□□□□ -0.89
APOC1-206ENST00000590334 IZUMO4Q1ZYL8 232 aa9.49□□□□□ -0.89
APOC1-206ENST00000590334 TMEM95Q3KNT9 176 aa9.49□□□□□ -0.89
APOC1-206ENST00000590334 AKIRIN2Q53H80 203 aa9.49□□□□□ -0.89
APOC1-206ENST00000590334 ARSJQ5FYB0 599 aaPredicted RBP9.49□□□□□ -0.89
APOC1-206ENST00000590334 STPG2Q8N412 459 aa9.49□□□□□ -0.89
APOC1-206ENST00000590334 OR5B3Q8NH48 314 aa9.49□□□□□ -0.89
APOC1-206ENST00000590334 OR4A16Q8NH70 328 aa9.49□□□□□ -0.89
APOC1-206ENST00000590334 RNASE11Q8TAA1 199 aaKnown RBP9.49□□□□□ -0.89
APOC1-206ENST00000590334 WIPF2Q8TF74 440 aaPredicted RBP9.49□□□□□ -0.89
APOC1-206ENST00000590334 SRSF12Q8WXF0 261 aaKnown RBP9.49□□□□□ -0.89
APOC1-206ENST00000590334 C19orf24Q9BVV8 132 aa9.49□□□□□ -0.89
APOC1-206ENST00000590334 PARP11Q9NR21 331 aa9.49□□□□□ -0.89
APOC1-206ENST00000590334 TEX50A0A1B0GTY4 177 aa9.48□□□□□ -0.89
APOC1-206ENST00000590334 A0A1B0GU03 582 aa9.48□□□□□ -0.89
APOC1-206ENST00000590334 A0A1B0GW64 132 aa9.48□□□□□ -0.89
APOC1-206ENST00000590334 TEX22C9J3V5 150 aa9.48□□□□□ -0.89
APOC1-206ENST00000590334 E7EUB6 86 aa9.48□□□□□ -0.89
APOC1-206ENST00000590334 RPL27AP46776 148 aaKnown RBP9.48□□□□□ -0.89
APOC1-206ENST00000590334 CFHR3Q02985 330 aa9.48□□□□□ -0.89
APOC1-206ENST00000590334 TATDN3Q17R31 274 aa9.48□□□□□ -0.89
APOC1-206ENST00000590334 PDLIM3Q53GG5 364 aaPredicted RBP9.48□□□□□ -0.89
APOC1-206ENST00000590334 THOC7Q6I9Y2 204 aaKnown RBP9.48□□□□□ -0.89
APOC1-206ENST00000590334 C12orf45Q8N5I9 185 aaPredicted RBP9.48□□□□□ -0.89
APOC1-206ENST00000590334 OR1L8Q8NGR8 309 aa9.48□□□□□ -0.89
APOC1-206ENST00000590334 TMEM68Q96MH6 324 aa9.48□□□□□ -0.89
APOC1-206ENST00000590334 NOL4LQ96MY1 436 aaPredicted RBP9.48□□□□□ -0.89
APOC1-206ENST00000590334 SPIN2AQ99865 258 aa9.48□□□□□ -0.89
APOC1-206ENST00000590334 SPIN2BQ9BPZ2 258 aa9.48□□□□□ -0.89
APOC1-206ENST00000590334 SRSF8Q9BRL6 282 aaKnown RBP9.48□□□□□ -0.89
APOC1-206ENST00000590334 GON7Q9BXV9 100 aa9.48□□□□□ -0.89
APOC1-206ENST00000590334 COMMD5Q9GZQ3 224 aa9.48□□□□□ -0.89
APOC1-206ENST00000590334 NDUFA4L2Q9NRX3 87 aa9.48□□□□□ -0.89
APOC1-206ENST00000590334 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.48□□□□□ -0.89
APOC1-206ENST00000590334 CACFD1Q9UGQ2 172 aa9.48□□□□□ -0.89
APOC1-206ENST00000590334 NSG2Q9Y328 171 aa9.48□□□□□ -0.89
APOC1-206ENST00000590334 RNF114Q9Y508 228 aa9.48□□□□□ -0.89
APOC1-206ENST00000590334 OR51B2Q9Y5P1 312 aa9.48□□□□□ -0.89
APOC1-206ENST00000590334 ATRQ13535 2644 aa9.48□□□□□ -0.89
APOC1-206ENST00000590334 TRAV41A0A0B4J266 112 aa9.47□□□□□ -0.89
APOC1-206ENST00000590334 MSGN1A6NI15 193 aa9.47□□□□□ -0.89
APOC1-206ENST00000590334 PITX3O75364 302 aa9.47□□□□□ -0.89
APOC1-206ENST00000590334 ADAP1O75689 374 aa9.47□□□□□ -0.89
APOC1-206ENST00000590334 HOXB5P09067 269 aa9.47□□□□□ -0.89
APOC1-206ENST00000590334 SULT1A3P0DMM9 295 aa9.47□□□□□ -0.89
APOC1-206ENST00000590334 SULT1A4P0DMN0 295 aa9.47□□□□□ -0.89
APOC1-206ENST00000590334 MYOD1P15172 320 aa9.47□□□□□ -0.89
APOC1-206ENST00000590334 PPIFP30405 207 aaKnown RBP9.47□□□□□ -0.89
APOC1-206ENST00000590334 HSPE1P61604 102 aaKnown RBP9.47□□□□□ -0.89
APOC1-206ENST00000590334 TMEM267Q0VDI3 215 aaPredicted RBP9.47□□□□□ -0.89
APOC1-206ENST00000590334 SMCO1Q147U7 214 aa9.47□□□□□ -0.89
APOC1-206ENST00000590334 KRTAP21-3Q3LHN1 58 aa9.47□□□□□ -0.89
APOC1-206ENST00000590334 C10orf55Q5SWW7 151 aa9.47□□□□□ -0.89
APOC1-206ENST00000590334 ASPHD1Q5U4P2 390 aa9.47□□□□□ -0.89
APOC1-206ENST00000590334 GGNBP1Q5YKI7 109 aa9.47□□□□□ -0.89
APOC1-206ENST00000590334 OR52E5Q8NH55 327 aa9.47□□□□□ -0.89
APOC1-206ENST00000590334 GRPEL2Q8TAA5 225 aa9.47□□□□□ -0.89
APOC1-206ENST00000590334 FAM103A1Q9BTL3 118 aaKnown RBP9.47□□□□□ -0.89
APOC1-206ENST00000590334 QTRT1Q9BXR0 403 aaKnown RBP9.47□□□□□ -0.89
APOC1-206ENST00000590334 CACNG5Q9UF02 275 aa9.47□□□□□ -0.89
APOC1-206ENST00000590334 INS-IGF2F8WCM5 200 aa9.46□□□□□ -0.9
APOC1-206ENST00000590334 G3V318 75 aa9.46□□□□□ -0.9
APOC1-206ENST00000590334 ST8SIA3O43173 380 aa9.46□□□□□ -0.9
APOC1-206ENST00000590334 IFNA21P01568 189 aa9.46□□□□□ -0.9
APOC1-206ENST00000590334 TRAPPC2P0DI81 140 aa9.46□□□□□ -0.9
APOC1-206ENST00000590334 TRAPPC2BP0DI82 140 aa9.46□□□□□ -0.9
APOC1-206ENST00000590334 PRCDQ00LT1 54 aa9.46□□□□□ -0.9
APOC1-206ENST00000590334 AWAT1Q58HT5 328 aa9.46□□□□□ -0.9
APOC1-206ENST00000590334 HSD17B13Q7Z5P4 300 aaPredicted RBP9.46□□□□□ -0.9
APOC1-206ENST00000590334 LFNGQ8NES3 379 aa9.46□□□□□ -0.9
APOC1-206ENST00000590334 LINC00527Q9UJ94 153 aa9.46□□□□□ -0.9
APOC1-206ENST00000590334 ALG5Q9Y673 324 aa9.46□□□□□ -0.9
APOC1-206ENST00000590334 IGLC7A0M8Q6 106 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms