RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 ZFAND6Q6FIF0 208 aa12.7□□□□□ -0.38
CROCCP3-203ENST00000589964 UNQ9165/PRO28630Q6UXU0 137 aa12.7□□□□□ -0.38
CROCCP3-203ENST00000589964 WDR89Q96FK6 387 aaPredicted RBP12.7□□□□□ -0.38
CROCCP3-203ENST00000589964 ZNF414Q96IQ9 312 aa12.7□□□□□ -0.38
CROCCP3-203ENST00000589964 FUNDC2Q9BWH2 189 aa12.7□□□□□ -0.38
CROCCP3-203ENST00000589964 IFT46Q9NQC8 304 aa12.7□□□□□ -0.38
CROCCP3-203ENST00000589964 TMEM140Q9NV12 185 aa12.7□□□□□ -0.38
CROCCP3-203ENST00000589964 BET1LQ9NYM9 111 aa12.7□□□□□ -0.38
CROCCP3-203ENST00000589964 TMEM213A2RRL7 107 aa12.69□□□□□ -0.38
CROCCP3-203ENST00000589964 FOLR2P14207 255 aa12.69□□□□□ -0.38
CROCCP3-203ENST00000589964 NAT1P18440 290 aa12.69□□□□□ -0.38
CROCCP3-203ENST00000589964 MSMO1Q15800 293 aa12.69□□□□□ -0.38
CROCCP3-203ENST00000589964 POU2AF1Q16633 256 aa12.69□□□□□ -0.38
CROCCP3-203ENST00000589964 KLK9Q2XQG4 91 aa12.69□□□□□ -0.38
CROCCP3-203ENST00000589964 DEFB114Q30KQ6 69 aa12.69□□□□□ -0.38
CROCCP3-203ENST00000589964 TMEM69Q5SWH9 247 aa12.69□□□□□ -0.38
CROCCP3-203ENST00000589964 SLC25A46Q96AG3 418 aa12.69□□□□□ -0.38
CROCCP3-203ENST00000589964 MOB3AQ96BX8 217 aa12.69□□□□□ -0.38
CROCCP3-203ENST00000589964 FAM110AQ9BQ89 295 aa12.69□□□□□ -0.38
CROCCP3-203ENST00000589964 ZNF2Q9BSG1 426 aaPredicted RBP12.69□□□□□ -0.38
CROCCP3-203ENST00000589964 EDA2RQ9HAV5 297 aa12.69□□□□□ -0.38
CROCCP3-203ENST00000589964 SIGLEC8Q9NYZ4 499 aa12.69□□□□□ -0.38
CROCCP3-203ENST00000589964 KLK9Q9UKQ9 250 aa12.69□□□□□ -0.38
CROCCP3-203ENST00000589964 CSMD3Q7Z407 3707 aa12.69□□□□□ -0.38
CROCCP3-203ENST00000589964 A0A087WXM4 84 aa12.68□□□□□ -0.38
CROCCP3-203ENST00000589964 IGHV3-21A0A0B4J1V1 117 aa12.68□□□□□ -0.38
CROCCP3-203ENST00000589964 RBMY1BA6NDE4 496 aaKnown RBP12.68□□□□□ -0.38
CROCCP3-203ENST00000589964 RBMY1EA6NEQ0 496 aaKnown RBP12.68□□□□□ -0.38
CROCCP3-203ENST00000589964 A8MZ25 164 aa12.68□□□□□ -0.38
CROCCP3-203ENST00000589964 RBFOX2O43251 390 aaKnown RBP eCLIP12.68□□□□□ -0.38
CROCCP3-203ENST00000589964 CREBL2O60519 120 aaPredicted RBP12.68□□□□□ -0.38
CROCCP3-203ENST00000589964 PGLYRP1O75594 196 aaPredicted RBP12.68□□□□□ -0.38
CROCCP3-203ENST00000589964 HRASP01112 189 aa12.68□□□□□ -0.38
CROCCP3-203ENST00000589964 RBMY1DP0C7P1 496 aaKnown RBP12.68□□□□□ -0.38
CROCCP3-203ENST00000589964 HLA-DMAP28067 261 aa12.68□□□□□ -0.38
CROCCP3-203ENST00000589964 HRH1P35367 487 aa12.68□□□□□ -0.38
CROCCP3-203ENST00000589964 MAS1LP35410 378 aa12.68□□□□□ -0.38
CROCCP3-203ENST00000589964 KIR2DS2P43631 304 aa12.68□□□□□ -0.38
CROCCP3-203ENST00000589964 WT1-ASQ06250 92 aa12.68□□□□□ -0.38
CROCCP3-203ENST00000589964 RNASE12Q5GAN4 147 aaKnown RBP12.68□□□□□ -0.38
CROCCP3-203ENST00000589964 Q8N402 240 aa12.68□□□□□ -0.38
CROCCP3-203ENST00000589964 DEFB125Q8N687 156 aa12.68□□□□□ -0.38
CROCCP3-203ENST00000589964 VSTM2AQ8TAG5 236 aa12.68□□□□□ -0.38
CROCCP3-203ENST00000589964 FCAMRQ8WWV6 532 aa12.68□□□□□ -0.38
CROCCP3-203ENST00000589964 COMMD3Q9UBI1 195 aa12.68□□□□□ -0.38
CROCCP3-203ENST00000589964 MLXQ9UH92 298 aa12.68□□□□□ -0.38
CROCCP3-203ENST00000589964 DPPA5A6NC42 116 aa12.67□□□□□ -0.38
CROCCP3-203ENST00000589964 HPGDSO60760 199 aa12.67□□□□□ -0.38
CROCCP3-203ENST00000589964 ELK1P19419 428 aa12.67□□□□□ -0.38
CROCCP3-203ENST00000589964 ARL3P36405 182 aa12.67□□□□□ -0.38
CROCCP3-203ENST00000589964 CBX5P45973 191 aa12.67□□□□□ -0.38
CROCCP3-203ENST00000589964 HERV-K104P61576 105 aa12.67□□□□□ -0.38
CROCCP3-203ENST00000589964 PHLDA2Q53GA4 152 aa12.67□□□□□ -0.38
CROCCP3-203ENST00000589964 TM4SF20Q53R12 229 aa12.67□□□□□ -0.38
CROCCP3-203ENST00000589964 LCN12Q6JVE5 192 aa12.67□□□□□ -0.38
CROCCP3-203ENST00000589964 DHRS11Q6UWP2 260 aa12.67□□□□□ -0.38
CROCCP3-203ENST00000589964 LINC00322Q6ZN03 302 aaPredicted RBP12.67□□□□□ -0.38
CROCCP3-203ENST00000589964 SNX29P2Q8IUI4 249 aa12.67□□□□□ -0.38
CROCCP3-203ENST00000589964 SGPP2Q8IWX5 399 aa12.67□□□□□ -0.38
CROCCP3-203ENST00000589964 GPX8Q8TED1 209 aa12.67□□□□□ -0.38
CROCCP3-203ENST00000589964 S100A16Q96FQ6 103 aaKnown RBP12.67□□□□□ -0.38
CROCCP3-203ENST00000589964 TEX50A0A1B0GTY4 177 aa12.66□□□□□ -0.38
CROCCP3-203ENST00000589964 H0Y980 276 aa12.66□□□□□ -0.38
CROCCP3-203ENST00000589964 GGCTO75223 188 aaKnown RBP12.66□□□□□ -0.38
CROCCP3-203ENST00000589964 IGKV1-39P01597 117 aa12.66□□□□□ -0.38
CROCCP3-203ENST00000589964 IGKV1D-39P04432 117 aa12.66□□□□□ -0.38
CROCCP3-203ENST00000589964 NQO2P16083 231 aa12.66□□□□□ -0.38
CROCCP3-203ENST00000589964 GPR183P32249 361 aa12.66□□□□□ -0.38
CROCCP3-203ENST00000589964 G6PCP35575 357 aa12.66□□□□□ -0.38
CROCCP3-203ENST00000589964 LPAR6P43657 344 aa12.66□□□□□ -0.38
CROCCP3-203ENST00000589964 TAS2R31P59538 309 aa12.66□□□□□ -0.38
CROCCP3-203ENST00000589964 CD81P60033 236 aa12.66□□□□□ -0.38
CROCCP3-203ENST00000589964 SLC25A42Q86VD7 318 aa12.66□□□□□ -0.38
CROCCP3-203ENST00000589964 TMEM61Q8N0U2 210 aa12.66□□□□□ -0.38
CROCCP3-203ENST00000589964 ZBTB34Q8NCN2 500 aa12.66□□□□□ -0.38
CROCCP3-203ENST00000589964 OR5H2Q8NGV7 314 aa12.66□□□□□ -0.38
CROCCP3-203ENST00000589964 ZNF502Q8TBZ5 544 aa12.66□□□□□ -0.38
CROCCP3-203ENST00000589964 CITED4Q96RK1 184 aa12.66□□□□□ -0.38
CROCCP3-203ENST00000589964 SACSQ9NZJ4 4579 aa12.66□□□□□ -0.38
CROCCP3-203ENST00000589964 IGHV3OR16-8A0A075B7F1 116 aa12.65□□□□□ -0.38
CROCCP3-203ENST00000589964 F8W735 103 aaPredicted RBP12.65□□□□□ -0.38
CROCCP3-203ENST00000589964 C3orf84H3BNL1 204 aa12.65□□□□□ -0.38
CROCCP3-203ENST00000589964 M0QYG6 137 aa12.65□□□□□ -0.38
CROCCP3-203ENST00000589964 TNFAIP8O95379 198 aa12.65□□□□□ -0.38
CROCCP3-203ENST00000589964 HPRT1P00492 218 aa12.65□□□□□ -0.38
CROCCP3-203ENST00000589964 IZUMO4Q1ZYL8 232 aa12.65□□□□□ -0.38
CROCCP3-203ENST00000589964 OR4A5Q8NH83 315 aa12.65□□□□□ -0.38
CROCCP3-203ENST00000589964 DYNLRB2Q8TF09 96 aa12.65□□□□□ -0.38
CROCCP3-203ENST00000589964 NEURL2Q9BR09 285 aa12.65□□□□□ -0.38
CROCCP3-203ENST00000589964 PLEKHA2Q9HB19 425 aa12.65□□□□□ -0.38
CROCCP3-203ENST00000589964 MARCH11A6NNE9 402 aa12.64□□□□□ -0.39
CROCCP3-203ENST00000589964 KRASP01116 189 aa12.64□□□□□ -0.39
CROCCP3-203ENST00000589964 CLEC3BP05452 202 aa12.64□□□□□ -0.39
CROCCP3-203ENST00000589964 CBLN1P23435 193 aa12.64□□□□□ -0.39
CROCCP3-203ENST00000589964 PRSS3P35030 304 aa12.64□□□□□ -0.39
CROCCP3-203ENST00000589964 CATR1Q13166 79 aa12.64□□□□□ -0.39
CROCCP3-203ENST00000589964 GUCA2BQ16661 112 aa12.64□□□□□ -0.39
CROCCP3-203ENST00000589964 TATDN3Q17R31 274 aa12.64□□□□□ -0.39
CROCCP3-203ENST00000589964 DMBX1Q8NFW5 382 aa12.64□□□□□ -0.39
CROCCP3-203ENST00000589964 QTRT1Q9BXR0 403 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms