RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 ARPC1AQ92747 370 aa12□□□□□ -0.49
ATG4D-211ENST00000589753 TAF15Q92804 592 aaKnown RBP eCLIP12□□□□□ -0.49
ATG4D-211ENST00000589753 CTNNBIP1Q9NSA3 81 aaPredicted RBP12□□□□□ -0.49
ATG4D-211ENST00000589753 TMEM14BQ9NUH8 114 aa12□□□□□ -0.49
ATG4D-211ENST00000589753 FKBP11Q9NYL4 201 aa12□□□□□ -0.49
ATG4D-211ENST00000589753 FOXA2Q9Y261 457 aaPredicted RBP12□□□□□ -0.49
ATG4D-211ENST00000589753 OR51B2Q9Y5P1 312 aa12□□□□□ -0.49
ATG4D-211ENST00000589753 CUBNO60494 3623 aa11.99□□□□□ -0.49
ATG4D-211ENST00000589753 LINC01548A6NM66 108 aa11.99□□□□□ -0.49
ATG4D-211ENST00000589753 NDUFA7O95182 113 aa11.99□□□□□ -0.49
ATG4D-211ENST00000589753 OPN1MWP04001 364 aa11.99□□□□□ -0.49
ATG4D-211ENST00000589753 OPN1MW2P0DN77 364 aa11.99□□□□□ -0.49
ATG4D-211ENST00000589753 OPN1MW3P0DN78 364 aa11.99□□□□□ -0.49
ATG4D-211ENST00000589753 SLC25A6P12236 298 aa11.99□□□□□ -0.49
ATG4D-211ENST00000589753 MYOD1P15172 320 aa11.99□□□□□ -0.49
ATG4D-211ENST00000589753 RPL27AP46776 148 aaKnown RBP11.99□□□□□ -0.49
ATG4D-211ENST00000589753 NDPQ00604 133 aa11.99□□□□□ -0.49
ATG4D-211ENST00000589753 C10orf55Q5SWW7 151 aa11.99□□□□□ -0.49
ATG4D-211ENST00000589753 ZNF429Q86V71 674 aa11.99□□□□□ -0.49
ATG4D-211ENST00000589753 GRPEL2Q8TAA5 225 aa11.99□□□□□ -0.49
ATG4D-211ENST00000589753 SRSF12Q8WXF0 261 aaKnown RBP11.99□□□□□ -0.49
ATG4D-211ENST00000589753 SPIN2AQ99865 258 aa11.99□□□□□ -0.49
ATG4D-211ENST00000589753 SPIN2BQ9BPZ2 258 aa11.99□□□□□ -0.49
ATG4D-211ENST00000589753 QTRT1Q9BXR0 403 aaKnown RBP11.99□□□□□ -0.49
ATG4D-211ENST00000589753 C16orf95Q9H693 158 aa11.99□□□□□ -0.49
ATG4D-211ENST00000589753 PARP11Q9NR21 331 aa11.99□□□□□ -0.49
ATG4D-211ENST00000589753 COA4Q9NYJ1 87 aa11.99□□□□□ -0.49
ATG4D-211ENST00000589753 TEX50A0A1B0GTY4 177 aa11.98□□□□□ -0.49
ATG4D-211ENST00000589753 C13orf42A0A1B0GVH6 325 aa11.98□□□□□ -0.49
ATG4D-211ENST00000589753 MPTX1A8MV57 137 aa11.98□□□□□ -0.49
ATG4D-211ENST00000589753 AP4M1O00189 453 aa11.98□□□□□ -0.49
ATG4D-211ENST00000589753 CCSO14618 274 aa11.98□□□□□ -0.49
ATG4D-211ENST00000589753 ATP6V0E1O15342 81 aa11.98□□□□□ -0.49
ATG4D-211ENST00000589753 VDAC2P45880 294 aaPredicted RBP11.98□□□□□ -0.49
ATG4D-211ENST00000589753 TMEM95Q3KNT9 176 aa11.98□□□□□ -0.49
ATG4D-211ENST00000589753 OR1L8Q8NGR8 309 aa11.98□□□□□ -0.49
ATG4D-211ENST00000589753 OR5B3Q8NH48 314 aa11.98□□□□□ -0.49
ATG4D-211ENST00000589753 FAM103A1Q9BTL3 118 aaKnown RBP11.98□□□□□ -0.49
ATG4D-211ENST00000589753 PDCD10Q9BUL8 212 aa11.98□□□□□ -0.49
ATG4D-211ENST00000589753 ZNF257Q9Y2Q1 563 aa11.98□□□□□ -0.49
ATG4D-211ENST00000589753 C5orf51A6NDU8 294 aa11.97□□□□□ -0.49
ATG4D-211ENST00000589753 MSGN1A6NI15 193 aa11.97□□□□□ -0.49
ATG4D-211ENST00000589753 FAM25EA8MYX2 175 aa11.97□□□□□ -0.49
ATG4D-211ENST00000589753 GOSR2O14653 212 aa11.97□□□□□ -0.49
ATG4D-211ENST00000589753 ST8SIA3O43173 380 aa11.97□□□□□ -0.49
ATG4D-211ENST00000589753 IGF1P05019 195 aa11.97□□□□□ -0.49
ATG4D-211ENST00000589753 HKR1P10072 659 aa11.97□□□□□ -0.49
ATG4D-211ENST00000589753 HSPE1P61604 102 aaKnown RBP11.97□□□□□ -0.49
ATG4D-211ENST00000589753 C2orf68Q2NKX9 166 aa11.97□□□□□ -0.49
ATG4D-211ENST00000589753 IAH1Q2TAA2 248 aaPredicted RBP11.97□□□□□ -0.49
ATG4D-211ENST00000589753 AARDQ4LEZ3 155 aa11.97□□□□□ -0.49
ATG4D-211ENST00000589753 GSG1LQ6UXU4 331 aa11.97□□□□□ -0.49
ATG4D-211ENST00000589753 Q6ZNX1 250 aa11.97□□□□□ -0.49
ATG4D-211ENST00000589753 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.97□□□□□ -0.49
ATG4D-211ENST00000589753 OR4F5Q8NH21 305 aa11.97□□□□□ -0.49
ATG4D-211ENST00000589753 OR1S1Q8NH92 325 aa11.97□□□□□ -0.49
ATG4D-211ENST00000589753 SGMS2Q8NHU3 365 aa11.97□□□□□ -0.49
ATG4D-211ENST00000589753 OR10C1Q96KK4 312 aa11.97□□□□□ -0.49
ATG4D-211ENST00000589753 FYTTD1Q96QD9 318 aaKnown RBP11.97□□□□□ -0.49
ATG4D-211ENST00000589753 MED28Q9H204 178 aa11.97□□□□□ -0.49
ATG4D-211ENST00000589753 CACFD1Q9UGQ2 172 aa11.97□□□□□ -0.49
ATG4D-211ENST00000589753 FBXO7Q9Y3I1 522 aa11.97□□□□□ -0.49
ATG4D-211ENST00000589753 E7EUB6 86 aa11.96□□□□□ -0.49
ATG4D-211ENST00000589753 PITX3O75364 302 aa11.96□□□□□ -0.49
ATG4D-211ENST00000589753 IFNA17P01571 189 aa11.96□□□□□ -0.49
ATG4D-211ENST00000589753 TRAPPC2P0DI81 140 aa11.96□□□□□ -0.49
ATG4D-211ENST00000589753 TRAPPC2BP0DI82 140 aa11.96□□□□□ -0.49
ATG4D-211ENST00000589753 EGR2P11161 476 aaPredicted RBP11.96□□□□□ -0.49
ATG4D-211ENST00000589753 ECSCRQ19T08 205 aa11.96□□□□□ -0.49
ATG4D-211ENST00000589753 OR5M8Q8NGP6 311 aa11.96□□□□□ -0.49
ATG4D-211ENST00000589753 OR52E5Q8NH55 327 aa11.96□□□□□ -0.49
ATG4D-211ENST00000589753 LINC01006Q8NI28 216 aa11.96□□□□□ -0.49
ATG4D-211ENST00000589753 NOL4LQ96MY1 436 aaPredicted RBP11.96□□□□□ -0.49
ATG4D-211ENST00000589753 HINT2Q9BX68 163 aa11.96□□□□□ -0.49
ATG4D-211ENST00000589753 NDUFA4L2Q9NRX3 87 aa11.96□□□□□ -0.49
ATG4D-211ENST00000589753 SERTAD4Q9NUC0 356 aa11.96□□□□□ -0.49
ATG4D-211ENST00000589753 LINC00527Q9UJ94 153 aa11.96□□□□□ -0.49
ATG4D-211ENST00000589753 ZNF580Q9UK33 172 aa11.96□□□□□ -0.49
ATG4D-211ENST00000589753 TRAV41A0A0B4J266 112 aa11.95□□□□□ -0.5
ATG4D-211ENST00000589753 A0A1B0GW64 132 aa11.95□□□□□ -0.5
ATG4D-211ENST00000589753 CGB1A6NKQ9 187 aa11.95□□□□□ -0.5
ATG4D-211ENST00000589753 TEX22C9J3V5 150 aa11.95□□□□□ -0.5
ATG4D-211ENST00000589753 NXPH3O95157 252 aa11.95□□□□□ -0.5
ATG4D-211ENST00000589753 CRIP2P52943 208 aaPredicted RBP11.95□□□□□ -0.5
ATG4D-211ENST00000589753 SPCS3P61009 180 aa11.95□□□□□ -0.5
ATG4D-211ENST00000589753 PRCDQ00LT1 54 aa11.95□□□□□ -0.5
ATG4D-211ENST00000589753 TMEM267Q0VDI3 215 aaPredicted RBP11.95□□□□□ -0.5
ATG4D-211ENST00000589753 STPG2Q8N412 459 aa11.95□□□□□ -0.5
ATG4D-211ENST00000589753 ZBTB8BQ8NAP8 495 aaPredicted RBP11.95□□□□□ -0.5
ATG4D-211ENST00000589753 LFNGQ8NES3 379 aa11.95□□□□□ -0.5
ATG4D-211ENST00000589753 GSKIPQ9P0R6 139 aa11.95□□□□□ -0.5
ATG4D-211ENST00000589753 MGAT4CQ9UBM8 478 aa11.95□□□□□ -0.5
ATG4D-211ENST00000589753 WSB1Q9Y6I7 421 aa11.95□□□□□ -0.5
ATG4D-211ENST00000589753 NIPBLQ6KC79 2804 aaeCLIP11.95□□□□□ -0.5
ATG4D-211ENST00000589753 HMX3A6NHT5 357 aa11.94□□□□□ -0.5
ATG4D-211ENST00000589753 G3V318 75 aa11.94□□□□□ -0.5
ATG4D-211ENST00000589753 SIX6O95475 246 aa11.94□□□□□ -0.5
ATG4D-211ENST00000589753 APELAP0DMC3 54 aa11.94□□□□□ -0.5
ATG4D-211ENST00000589753 RRAS2P62070 204 aaPredicted RBP11.94□□□□□ -0.5
ATG4D-211ENST00000589753 KRTAP24-1Q3LI83 254 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms