RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 GALP22466 123 aa13.67□□□□□ -0.22
CCDC43-204ENST00000588687 OR2B8PP59922 312 aa13.67□□□□□ -0.22
CCDC43-204ENST00000588687 ARL6IP1Q15041 203 aa13.67□□□□□ -0.22
CCDC43-204ENST00000588687 ANKRD55Q3KP44 614 aa13.67□□□□□ -0.22
CCDC43-204ENST00000588687 CNIH2Q6PI25 160 aa13.67□□□□□ -0.22
CCDC43-204ENST00000588687 CEMP1Q6PRD7 247 aaPredicted RBP13.67□□□□□ -0.22
CCDC43-204ENST00000588687 Q6ZWC4 215 aa13.67□□□□□ -0.22
CCDC43-204ENST00000588687 SSX9Q7RTT3 188 aa13.67□□□□□ -0.22
CCDC43-204ENST00000588687 ZNF367Q7RTV3 350 aa13.67□□□□□ -0.22
CCDC43-204ENST00000588687 MFSD4AQ8N468 514 aa13.67□□□□□ -0.22
CCDC43-204ENST00000588687 MARC2Q969Z3 335 aa13.67□□□□□ -0.22
CCDC43-204ENST00000588687 ZNF436Q9C0F3 470 aaPredicted RBP13.67□□□□□ -0.22
CCDC43-204ENST00000588687 BET1LQ9NYM9 111 aa13.67□□□□□ -0.22
CCDC43-204ENST00000588687 TRDV1A0A1B0GX56 115 aa13.66□□□□□ -0.22
CCDC43-204ENST00000588687 DHFRP00374 187 aa13.66□□□□□ -0.22
CCDC43-204ENST00000588687 CLEC3BP05452 202 aa13.66□□□□□ -0.22
CCDC43-204ENST00000588687 MYL9P24844 172 aa13.66□□□□□ -0.22
CCDC43-204ENST00000588687 GPR183P32249 361 aa13.66□□□□□ -0.22
CCDC43-204ENST00000588687 DEFB135Q30KP9 77 aa13.66□□□□□ -0.22
CCDC43-204ENST00000588687 ODF3L2Q3SX64 289 aa13.66□□□□□ -0.22
CCDC43-204ENST00000588687 ZNF66Q6ZN08 573 aa13.66□□□□□ -0.22
CCDC43-204ENST00000588687 OR1L6Q8NGR2 347 aa13.66□□□□□ -0.22
CCDC43-204ENST00000588687 CXorf58Q96LI9 332 aa13.66□□□□□ -0.22
CCDC43-204ENST00000588687 ANXA10Q9UJ72 324 aa13.66□□□□□ -0.22
CCDC43-204ENST00000588687 SMIM30A4D0T7 59 aa13.65□□□□□ -0.22
CCDC43-204ENST00000588687 S1PR2O95136 353 aa13.65□□□□□ -0.22
CCDC43-204ENST00000588687 BMI1P35226 326 aa13.65□□□□□ -0.22
CCDC43-204ENST00000588687 ELLP55199 621 aaPredicted RBP13.65□□□□□ -0.22
CCDC43-204ENST00000588687 ZNF585BQ52M93 769 aa13.65□□□□□ -0.22
CCDC43-204ENST00000588687 ZNF773Q6PK81 442 aa13.65□□□□□ -0.22
CCDC43-204ENST00000588687 RPP25LQ8N5L8 163 aaKnown RBP13.65□□□□□ -0.22
CCDC43-204ENST00000588687 TMEM190Q8WZ59 177 aa13.65□□□□□ -0.22
CCDC43-204ENST00000588687 SPAG8Q99932 426 aaPredicted RBP13.65□□□□□ -0.22
CCDC43-204ENST00000588687 C5orf66Q9H5L9 145 aa13.65□□□□□ -0.22
CCDC43-204ENST00000588687 MRPL27Q9P0M9 148 aaKnown RBP13.65□□□□□ -0.22
CCDC43-204ENST00000588687 FAT2Q9NYQ8 4349 aa13.65□□□□□ -0.22
CCDC43-204ENST00000588687 TRAV3A0A0B4J244 114 aa13.64□□□□□ -0.23
CCDC43-204ENST00000588687 IGHV3-35A0A0C4DH35 117 aa13.64□□□□□ -0.23
CCDC43-204ENST00000588687 HRASP01112 189 aa13.64□□□□□ -0.23
CCDC43-204ENST00000588687 MSMO1Q15800 293 aa13.64□□□□□ -0.23
CCDC43-204ENST00000588687 POU2AF1Q16633 256 aa13.64□□□□□ -0.23
CCDC43-204ENST00000588687 C22orf42Q6IC83 251 aa13.64□□□□□ -0.23
CCDC43-204ENST00000588687 OR2C3Q8N628 320 aa13.64□□□□□ -0.23
CCDC43-204ENST00000588687 OR4A5Q8NH83 315 aa13.64□□□□□ -0.23
CCDC43-204ENST00000588687 TSPAN4O14817 238 aa13.63□□□□□ -0.23
CCDC43-204ENST00000588687 RBFOX2O43251 390 aaKnown RBP eCLIP13.63□□□□□ -0.23
CCDC43-204ENST00000588687 TNFSF12O43508 249 aa13.63□□□□□ -0.23
CCDC43-204ENST00000588687 SPRY2O43597 315 aa13.63□□□□□ -0.23
CCDC43-204ENST00000588687 APOC4P55056 127 aa13.63□□□□□ -0.23
CCDC43-204ENST00000588687 RNF183Q96D59 192 aa13.63□□□□□ -0.23
CCDC43-204ENST00000588687 ZNF414Q96IQ9 312 aa13.63□□□□□ -0.23
CCDC43-204ENST00000588687 UBQLN2Q9UHD9 624 aa13.63□□□□□ -0.23
CCDC43-204ENST00000588687 UFC1Q9Y3C8 167 aa13.63□□□□□ -0.23
CCDC43-204ENST00000588687 DNAH2Q9P225 4427 aa13.62□□□□□ -0.23
CCDC43-204ENST00000588687 TGOLN2O43493 480 aa13.62□□□□□ -0.23
CCDC43-204ENST00000588687 FGF2P09038 288 aa13.62□□□□□ -0.23
CCDC43-204ENST00000588687 PTHLHP12272 177 aa13.62□□□□□ -0.23
CCDC43-204ENST00000588687 DEFA4P12838 97 aa13.62□□□□□ -0.23
CCDC43-204ENST00000588687 PTBP1P26599 531 aaKnown RBP eCLIP13.62□□□□□ -0.23
CCDC43-204ENST00000588687 RBPMS2Q6ZRY4 209 aaKnown RBP13.62□□□□□ -0.23
CCDC43-204ENST00000588687 OR13F1Q8NGS4 319 aa13.62□□□□□ -0.23
CCDC43-204ENST00000588687 SRSF8Q9BRL6 282 aaKnown RBP13.62□□□□□ -0.23
CCDC43-204ENST00000588687 CCL28Q9NRJ3 127 aa13.62□□□□□ -0.23
CCDC43-204ENST00000588687 PKHD1P08F94 4074 aa13.61□□□□□ -0.23
CCDC43-204ENST00000588687 KIR2DL5BA0A0G2JN68 375 aa13.61□□□□□ -0.23
CCDC43-204ENST00000588687 KIR2DL5BA0A0G2JPC4 375 aa13.61□□□□□ -0.23
CCDC43-204ENST00000588687 NOTOA8MTQ0 251 aa13.61□□□□□ -0.23
CCDC43-204ENST00000588687 F8W735 103 aaPredicted RBP13.61□□□□□ -0.23
CCDC43-204ENST00000588687 GNG2P59768 71 aa13.61□□□□□ -0.23
CCDC43-204ENST00000588687 SPAG16Q8N0X2 631 aa13.61□□□□□ -0.23
CCDC43-204ENST00000588687 KIR2DL5AQ8N109 375 aa13.61□□□□□ -0.23
CCDC43-204ENST00000588687 KIR2DL5BQ8NHK3 375 aa13.61□□□□□ -0.23
CCDC43-204ENST00000588687 LGALS14Q8TCE9 139 aa13.61□□□□□ -0.23
CCDC43-204ENST00000588687 ANKRD65E5RJM6 399 aa13.6□□□□□ -0.23
CCDC43-204ENST00000588687 UPK2O00526 184 aa13.6□□□□□ -0.23
CCDC43-204ENST00000588687 UBE2CO00762 179 aa13.6□□□□□ -0.23
CCDC43-204ENST00000588687 MFAP2P55001 183 aa13.6□□□□□ -0.23
CCDC43-204ENST00000588687 TAS2R31P59538 309 aa13.6□□□□□ -0.23
CCDC43-204ENST00000588687 WT1-ASQ06250 92 aa13.6□□□□□ -0.23
CCDC43-204ENST00000588687 PLET1Q6UQ28 207 aa13.6□□□□□ -0.23
CCDC43-204ENST00000588687 GDPD1Q8N9F7 314 aa13.6□□□□□ -0.23
CCDC43-204ENST00000588687 OR10W1Q8NGF6 305 aa13.6□□□□□ -0.23
CCDC43-204ENST00000588687 VN1R17PQ8TDU5 208 aa13.6□□□□□ -0.23
CCDC43-204ENST00000588687 SECTM1Q8WVN6 248 aa13.6□□□□□ -0.23
CCDC43-204ENST00000588687 HRASLSQ9HDD0 168 aa13.6□□□□□ -0.23
CCDC43-204ENST00000588687 DAZ1Q9NQZ3 744 aaKnown RBP13.6□□□□□ -0.23
CCDC43-204ENST00000588687 SULT1C2O00338 296 aa13.59□□□□□ -0.23
CCDC43-204ENST00000588687 DEDDO75618 318 aa13.59□□□□□ -0.23
CCDC43-204ENST00000588687 SCGNO76038 276 aa13.59□□□□□ -0.23
CCDC43-204ENST00000588687 PPYP01298 95 aa13.59□□□□□ -0.23
CCDC43-204ENST00000588687 FGF9P31371 208 aaPredicted RBP13.59□□□□□ -0.23
CCDC43-204ENST00000588687 FCGR2CP31995 323 aa13.59□□□□□ -0.23
CCDC43-204ENST00000588687 SLC38A6Q8IZM9 456 aa13.59□□□□□ -0.23
CCDC43-204ENST00000588687 GVQW1Q8N7I0 195 aa13.59□□□□□ -0.23
CCDC43-204ENST00000588687 BEST4Q8NFU0 473 aa13.59□□□□□ -0.23
CCDC43-204ENST00000588687 SLC25A38Q96DW6 304 aa13.59□□□□□ -0.23
CCDC43-204ENST00000588687 QTRT1Q9BXR0 403 aaKnown RBP13.59□□□□□ -0.23
CCDC43-204ENST00000588687 TMEM140Q9NV12 185 aa13.59□□□□□ -0.23
CCDC43-204ENST00000588687 TXNL4BQ9NX01 149 aaKnown RBP13.59□□□□□ -0.23
CCDC43-204ENST00000588687 RYR1P21817 5038 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms