RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 HAPLN4Q86UW8 402 aa14.96□□□□□ -0.01
TPM4-208ENST00000588410 FXYD6Q9H0Q3 95 aa14.96□□□□□ -0.01
TPM4-208ENST00000588410 TMEM140Q9NV12 185 aa14.96□□□□□ -0.01
TPM4-208ENST00000588410 PEMTQ9UBM1 199 aa14.96□□□□□ -0.01
TPM4-208ENST00000588410 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.95□□□□□ -0.02
TPM4-208ENST00000588410 IGLV1-51P01701 117 aa14.95□□□□□ -0.02
TPM4-208ENST00000588410 MYOD1P15172 320 aa14.95□□□□□ -0.02
TPM4-208ENST00000588410 RPA2P15927 270 aa14.95□□□□□ -0.02
TPM4-208ENST00000588410 HIST1H1BP16401 226 aaKnown RBP14.95□□□□□ -0.02
TPM4-208ENST00000588410 F2RP25116 425 aa14.95□□□□□ -0.02
TPM4-208ENST00000588410 DGCR14Q96DF8 476 aaKnown RBP14.95□□□□□ -0.02
TPM4-208ENST00000588410 ASCL2Q99929 193 aa14.95□□□□□ -0.02
TPM4-208ENST00000588410 A0A1B0GW64 132 aa14.94□□□□□ -0.02
TPM4-208ENST00000588410 CRYGCP07315 174 aa14.94□□□□□ -0.02
TPM4-208ENST00000588410 LPAR6P43657 344 aa14.94□□□□□ -0.02
TPM4-208ENST00000588410 C19orf35Q6ZS72 473 aa14.94□□□□□ -0.02
TPM4-208ENST00000588410 EXTL2Q9UBQ6 330 aa14.94□□□□□ -0.02
TPM4-208ENST00000588410 TRAV3A0A0B4J244 114 aa14.93□□□□□ -0.02
TPM4-208ENST00000588410 H0Y980 276 aa14.93□□□□□ -0.02
TPM4-208ENST00000588410 BMPR1BO00238 502 aa14.93□□□□□ -0.02
TPM4-208ENST00000588410 REG1AP05451 166 aa14.93□□□□□ -0.02
TPM4-208ENST00000588410 CTRB1P17538 263 aa14.93□□□□□ -0.02
TPM4-208ENST00000588410 OR2B8PP59922 312 aa14.93□□□□□ -0.02
TPM4-208ENST00000588410 PHLDA2Q53GA4 152 aa14.93□□□□□ -0.02
TPM4-208ENST00000588410 RNASE12Q5GAN4 147 aaKnown RBP14.93□□□□□ -0.02
TPM4-208ENST00000588410 CTRB2Q6GPI1 263 aa14.93□□□□□ -0.02
TPM4-208ENST00000588410 MARCH11A6NNE9 402 aa14.92□□□□□ -0.02
TPM4-208ENST00000588410 NDUFB8O95169 186 aa14.92□□□□□ -0.02
TPM4-208ENST00000588410 IFNA6P05013 189 aa14.92□□□□□ -0.02
TPM4-208ENST00000588410 FGF2P09038 288 aa14.92□□□□□ -0.02
TPM4-208ENST00000588410 IL34Q6ZMJ4 242 aa14.92□□□□□ -0.02
TPM4-208ENST00000588410 C15orf40Q8WUR7 153 aa14.92□□□□□ -0.02
TPM4-208ENST00000588410 FCAMRQ8WWV6 532 aa14.92□□□□□ -0.02
TPM4-208ENST00000588410 EEF1AKMT3Q96AZ1 226 aa14.92□□□□□ -0.02
TPM4-208ENST00000588410 FANCD2OSQ96PS1 177 aa14.92□□□□□ -0.02
TPM4-208ENST00000588410 SRSF8Q9BRL6 282 aaKnown RBP14.92□□□□□ -0.02
TPM4-208ENST00000588410 QTRT1Q9BXR0 403 aaKnown RBP14.92□□□□□ -0.02
TPM4-208ENST00000588410 U3KQK5 164 aa14.92□□□□□ -0.02
TPM4-208ENST00000588410 CGB1A6NKQ9 187 aa14.91□□□□□ -0.02
TPM4-208ENST00000588410 CYB5BO43169 146 aa14.91□□□□□ -0.02
TPM4-208ENST00000588410 GGCTO75223 188 aaKnown RBP14.91□□□□□ -0.02
TPM4-208ENST00000588410 SNAPC5O75971 98 aa14.91□□□□□ -0.02
TPM4-208ENST00000588410 KRASP01116 189 aa14.91□□□□□ -0.02
TPM4-208ENST00000588410 IGHV3-23P01764 117 aa14.91□□□□□ -0.02
TPM4-208ENST00000588410 CSN3P07498 182 aa14.91□□□□□ -0.02
TPM4-208ENST00000588410 ALDH3B2P48448 385 aa14.91□□□□□ -0.02
TPM4-208ENST00000588410 SLC38A6Q8IZM9 456 aa14.91□□□□□ -0.02
TPM4-208ENST00000588410 SIGLEC8Q9NYZ4 499 aa14.91□□□□□ -0.02
TPM4-208ENST00000588410 PPP5D1E7EU14 171 aa14.9□□□□□ -0.02
TPM4-208ENST00000588410 M0QYG6 137 aa14.9□□□□□ -0.02
TPM4-208ENST00000588410 RGS5O15539 181 aa14.9□□□□□ -0.02
TPM4-208ENST00000588410 TRAPPC2P0DI81 140 aa14.9□□□□□ -0.02
TPM4-208ENST00000588410 TRAPPC2BP0DI82 140 aa14.9□□□□□ -0.02
TPM4-208ENST00000588410 G6PCP35575 357 aa14.9□□□□□ -0.02
TPM4-208ENST00000588410 RNASE10Q5GAN6 216 aaKnown RBP14.9□□□□□ -0.02
TPM4-208ENST00000588410 THOC7Q6I9Y2 204 aaKnown RBP14.9□□□□□ -0.02
TPM4-208ENST00000588410 LCN12Q6JVE5 192 aa14.9□□□□□ -0.02
TPM4-208ENST00000588410 CLEC19AQ6UXS0 136 aa14.9□□□□□ -0.02
TPM4-208ENST00000588410 HSD17B13Q7Z5P4 300 aaPredicted RBP14.9□□□□□ -0.02
TPM4-208ENST00000588410 OR1L8Q8NGR8 309 aa14.9□□□□□ -0.02
TPM4-208ENST00000588410 CXorf58Q96LI9 332 aa14.9□□□□□ -0.02
TPM4-208ENST00000588410 WWC2-AS2Q96NR7 200 aa14.9□□□□□ -0.02
TPM4-208ENST00000588410 HINT2Q9BX68 163 aa14.9□□□□□ -0.02
TPM4-208ENST00000588410 THYN1Q9P016 225 aa14.9□□□□□ -0.02
TPM4-208ENST00000588410 S4R3C0 116 aa14.9□□□□□ -0.02
TPM4-208ENST00000588410 IGLV11-55A0A075B6I3 123 aa14.89□□□□□ -0.03
TPM4-208ENST00000588410 IGLC7A0M8Q6 106 aa14.89□□□□□ -0.03
TPM4-208ENST00000588410 TPPPO94811 219 aa14.89□□□□□ -0.03
TPM4-208ENST00000588410 ARL3P36405 182 aa14.89□□□□□ -0.03
TPM4-208ENST00000588410 UCP3P55916 312 aa14.89□□□□□ -0.03
TPM4-208ENST00000588410 ZNF585BQ52M93 769 aa14.89□□□□□ -0.03
TPM4-208ENST00000588410 TBC1D26Q86UD7 250 aa14.89□□□□□ -0.03
TPM4-208ENST00000588410 CLVS1Q8IUQ0 354 aaPredicted RBP14.89□□□□□ -0.03
TPM4-208ENST00000588410 SGPP2Q8IWX5 399 aa14.89□□□□□ -0.03
TPM4-208ENST00000588410 Q8N402 240 aa14.89□□□□□ -0.03
TPM4-208ENST00000588410 OR52I2Q8NH67 350 aa14.89□□□□□ -0.03
TPM4-208ENST00000588410 KLK11Q9UBX7 282 aa14.89□□□□□ -0.03
TPM4-208ENST00000588410 DNAH9Q9NYC9 4486 aa14.88□□□□□ -0.03
TPM4-208ENST00000588410 TRBV7-1A0A0A6YYK4 115 aa14.88□□□□□ -0.03
TPM4-208ENST00000588410 TEX50A0A1B0GTY4 177 aa14.88□□□□□ -0.03
TPM4-208ENST00000588410 OR2C1O95371 312 aa14.88□□□□□ -0.03
TPM4-208ENST00000588410 HLA-AP01891 365 aaKnown RBP14.88□□□□□ -0.03
TPM4-208ENST00000588410 FRMD6-AS1P0C7T7 363 aa14.88□□□□□ -0.03
TPM4-208ENST00000588410 OR13C7P0DN81 318 aa14.88□□□□□ -0.03
TPM4-208ENST00000588410 PGAM2P15259 253 aa14.88□□□□□ -0.03
TPM4-208ENST00000588410 SPCS2Q15005 226 aa14.88□□□□□ -0.03
TPM4-208ENST00000588410 KLK9Q2XQG4 91 aa14.88□□□□□ -0.03
TPM4-208ENST00000588410 DYNLRB2Q8TF09 96 aa14.88□□□□□ -0.03
TPM4-208ENST00000588410 TSC22D3Q99576 134 aa14.88□□□□□ -0.03
TPM4-208ENST00000588410 FAM212BQ9NTI7 297 aaPredicted RBP14.88□□□□□ -0.03
TPM4-208ENST00000588410 KLK9Q9UKQ9 250 aa14.88□□□□□ -0.03
TPM4-208ENST00000588410 PRNDQ9UKY0 176 aa14.88□□□□□ -0.03
TPM4-208ENST00000588410 NSG2Q9Y328 171 aa14.88□□□□□ -0.03
TPM4-208ENST00000588410 OR51B2Q9Y5P1 312 aa14.88□□□□□ -0.03
TPM4-208ENST00000588410 TBPP20226 339 aa14.87□□□□□ -0.03
TPM4-208ENST00000588410 FAM106AQ4KMX7 169 aa14.87□□□□□ -0.03
TPM4-208ENST00000588410 GTSCR1Q86UQ5 136 aa14.87□□□□□ -0.03
TPM4-208ENST00000588410 CADM3Q8N126 398 aa14.87□□□□□ -0.03
TPM4-208ENST00000588410 OR10W1Q8NGF6 305 aa14.87□□□□□ -0.03
TPM4-208ENST00000588410 OR2K2Q8NGT1 345 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms