RNA–Protein interactions for RNA: ENST00000588109.5

LIG3-210, Transcript of DNA ligase 3, humanhuman

TSL 4

Gene LIG3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-210ENST00000588109 INAFM1C9JVW0 142 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 CCSO14618 274 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 NBR2O15453 112 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 SLC25A17O43808 307 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 ADAP1O75689 374 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 SNAPC5O75971 98 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 ACTL6BO94805 426 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 IGHV4-59P01825 116 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 VDAC1P21796 283 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 LGALS7P47929 136 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 DYNLT3P51808 116 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 BRWD1-AS2P59051 145 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 KRTAP10-2P60368 255 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 RRAS2P62070 204 aaPredicted RBP4.24□□□□□ -1.73
LIG3-210ENST00000588109 HABP2Q14520 560 aaPredicted RBP4.24□□□□□ -1.73
LIG3-210ENST00000588109 FCN2Q15485 313 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 AANATQ16613 207 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 GGNBP1Q5YKI7 109 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 OR4A47Q6IF82 309 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 GSG1LQ6UXU4 331 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 SIGLECL1Q8N7X8 197 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 LRTM2Q8N967 370 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 OR4A16Q8NH70 328 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 OR5R1Q8NH85 324 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 OR1S1Q8NH92 325 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 VSTM2AQ8TAG5 236 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 SSMEM1Q8WWF3 244 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 LSM10Q969L4 123 aaKnown RBP4.24□□□□□ -1.73
LIG3-210ENST00000588109 RITA1Q96K30 269 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 SPIN2AQ99865 258 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 RNF5Q99942 180 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 SPIN2BQ9BPZ2 258 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 SLC25A33Q9BSK2 321 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 ZNF747Q9BV97 191 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 CHIAQ9BZP6 476 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 RAB18Q9NP72 206 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 TMEM140Q9NV12 185 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 C1RLQ9NZP8 487 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 METTL1Q9UBP6 276 aaKnown RBP4.24□□□□□ -1.73
LIG3-210ENST00000588109 PITPNC1Q9UKF7 332 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 TCF19Q9Y242 345 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 TMED3Q9Y3Q3 217 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 MMP24Q9Y5R2 645 aa4.24□□□□□ -1.73
LIG3-210ENST00000588109 SVEP1Q4LDE5 3571 aa4.23□□□□□ -1.73
LIG3-210ENST00000588109 OTOGQ6ZRI0 2925 aa4.23□□□□□ -1.73
LIG3-210ENST00000588109 SETXQ7Z333 2677 aaKnown RBP4.23□□□□□ -1.73
LIG3-210ENST00000588109 FAM90A9PA6NNJ1 464 aa4.23□□□□□ -1.73
LIG3-210ENST00000588109 RRHO14718 337 aa4.23□□□□□ -1.73
LIG3-210ENST00000588109 KBTBD11O94819 623 aa4.23□□□□□ -1.73
LIG3-210ENST00000588109 OR2A4O95047 310 aa4.23□□□□□ -1.73
LIG3-210ENST00000588109 SCAF4O95104 1147 aaKnown RBP4.23□□□□□ -1.73
LIG3-210ENST00000588109 NXPH3O95157 252 aa4.23□□□□□ -1.73
LIG3-210ENST00000588109 SPDEFO95238 335 aa4.23□□□□□ -1.73
LIG3-210ENST00000588109 SIX6O95475 246 aa4.23□□□□□ -1.73
LIG3-210ENST00000588109 IGKV1-39P01597 117 aa4.23□□□□□ -1.73
LIG3-210ENST00000588109 IGKV1-5P01602 117 aa4.23□□□□□ -1.73
LIG3-210ENST00000588109 IGKV1D-39P04432 117 aa4.23□□□□□ -1.73
LIG3-210ENST00000588109 SAA1P0DJI8 122 aaPredicted RBP4.23□□□□□ -1.73
LIG3-210ENST00000588109 SULT1A3P0DMM9 295 aa4.23□□□□□ -1.73
LIG3-210ENST00000588109 SULT1A4P0DMN0 295 aa4.23□□□□□ -1.73
LIG3-210ENST00000588109 CNTFRP26992 372 aa4.23□□□□□ -1.73
LIG3-210ENST00000588109 IER3P46695 156 aa4.23□□□□□ -1.73
LIG3-210ENST00000588109 OR2B8PP59922 312 aa4.23□□□□□ -1.73
LIG3-210ENST00000588109 UBE2KP61086 200 aa4.23□□□□□ -1.73
LIG3-210ENST00000588109 GNB1P62873 340 aa4.23□□□□□ -1.73
LIG3-210ENST00000588109 PSG5Q15238 335 aa4.23□□□□□ -1.73
LIG3-210ENST00000588109 IZUMO4Q1ZYL8 232 aa4.23□□□□□ -1.73
LIG3-210ENST00000588109 IAH1Q2TAA2 248 aaPredicted RBP4.23□□□□□ -1.73
LIG3-210ENST00000588109 Q6YL49 198 aa4.23□□□□□ -1.73
LIG3-210ENST00000588109 TMEM219Q86XT9 240 aa4.23□□□□□ -1.73
LIG3-210ENST00000588109 FAM219AQ8IW50 185 aa4.23□□□□□ -1.73
LIG3-210ENST00000588109 OR5M8Q8NGP6 311 aa4.23□□□□□ -1.73
LIG3-210ENST00000588109 OR4A5Q8NH83 315 aa4.23□□□□□ -1.73
LIG3-210ENST00000588109 ZNF418Q8TF45 676 aaPredicted RBP4.23□□□□□ -1.73
LIG3-210ENST00000588109 GPR146Q96CH1 333 aa4.23□□□□□ -1.73
LIG3-210ENST00000588109 ZNF503Q96F45 646 aa4.23□□□□□ -1.73
LIG3-210ENST00000588109 SEC22AQ96IW7 307 aa4.23□□□□□ -1.73
LIG3-210ENST00000588109 ZNF48Q96MX3 618 aaPredicted RBP4.23□□□□□ -1.73
LIG3-210ENST00000588109 OR2A7Q96R45 310 aa4.23□□□□□ -1.73
LIG3-210ENST00000588109 CLCC1Q96S66 551 aa4.23□□□□□ -1.73
LIG3-210ENST00000588109 RASL11BQ9BPW5 248 aa4.23□□□□□ -1.73
LIG3-210ENST00000588109 TMPRSS5Q9H3S3 457 aa4.23□□□□□ -1.73
LIG3-210ENST00000588109 FBXL15Q9H469 300 aa4.23□□□□□ -1.73
LIG3-210ENST00000588109 RANBP3Q9H6Z4 567 aaPredicted RBP4.23□□□□□ -1.73
LIG3-210ENST00000588109 BET1LQ9NYM9 111 aa4.23□□□□□ -1.73
LIG3-210ENST00000588109 GSKIPQ9P0R6 139 aa4.23□□□□□ -1.73
LIG3-210ENST00000588109 CACNG5Q9UF02 275 aa4.23□□□□□ -1.73
LIG3-210ENST00000588109 MOB4Q9Y3A3 225 aa4.23□□□□□ -1.73
LIG3-210ENST00000588109 CSPG4Q6UVK1 2322 aa4.22□□□□□ -1.73
LIG3-210ENST00000588109 A0A0G2JRQ6 117 aa4.22□□□□□ -1.73
LIG3-210ENST00000588109 A0A1B0GU03 582 aa4.22□□□□□ -1.73
LIG3-210ENST00000588109 A6NDX4 124 aa4.22□□□□□ -1.73
LIG3-210ENST00000588109 HMX3A6NHT5 357 aa4.22□□□□□ -1.73
LIG3-210ENST00000588109 C15orf61A6NNL5 157 aa4.22□□□□□ -1.73
LIG3-210ENST00000588109 SRRM4A7MD48 611 aaKnown RBP4.22□□□□□ -1.73
LIG3-210ENST00000588109 MPTX1A8MV57 137 aa4.22□□□□□ -1.73
LIG3-210ENST00000588109 M0QZK8 103 aa4.22□□□□□ -1.73
LIG3-210ENST00000588109 WRBO00258 174 aa4.22□□□□□ -1.73
LIG3-210ENST00000588109 UPK2O00526 184 aa4.22□□□□□ -1.73
LIG3-210ENST00000588109 OR2F2O95006 317 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms