RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 CACFD1Q9UGQ2 172 aa16.49■□□□□ 0.23
ATG4D-204ENST00000586417 TCF19Q9Y242 345 aa16.49■□□□□ 0.23
ATG4D-204ENST00000586417 AMMECR1Q9Y4X0 333 aaPredicted RBP16.49■□□□□ 0.23
ATG4D-204ENST00000586417 PMS2P5A8MQ11 134 aa16.49■□□□□ 0.23
ATG4D-204ENST00000586417 FOXH1O75593 365 aa16.49■□□□□ 0.23
ATG4D-204ENST00000586417 MC5RP33032 325 aa16.49■□□□□ 0.23
ATG4D-204ENST00000586417 RAB13P51153 203 aa16.49■□□□□ 0.23
ATG4D-204ENST00000586417 HSD17B11Q8NBQ5 300 aa16.49■□□□□ 0.23
ATG4D-204ENST00000586417 LRRC20Q8TCA0 184 aa16.49■□□□□ 0.23
ATG4D-204ENST00000586417 SH3BGRL3Q9H299 93 aa16.49■□□□□ 0.23
ATG4D-204ENST00000586417 NUP50Q9UKX7 468 aa16.49■□□□□ 0.23
ATG4D-204ENST00000586417 STRAPQ9Y3F4 350 aaKnown RBP16.49■□□□□ 0.23
ATG4D-204ENST00000586417 IGHV1-3A0A0C4DH29 117 aa16.48■□□□□ 0.23
ATG4D-204ENST00000586417 IGHV2-70DA0A0C4DH43 119 aa16.48■□□□□ 0.23
ATG4D-204ENST00000586417 ODF3BA8MYP8 253 aa16.48■□□□□ 0.23
ATG4D-204ENST00000586417 SULT1A2P50226 295 aa16.48■□□□□ 0.23
ATG4D-204ENST00000586417 KLRD1Q13241 179 aa16.48■□□□□ 0.23
ATG4D-204ENST00000586417 PRNDQ9UKY0 176 aa16.48■□□□□ 0.23
ATG4D-204ENST00000586417 KPTNQ9Y664 436 aa16.48■□□□□ 0.23
ATG4D-204ENST00000586417 ABCA1O95477 2261 aa16.48■□□□□ 0.23
ATG4D-204ENST00000586417 DFFBO76075 338 aa16.47■□□□□ 0.23
ATG4D-204ENST00000586417 LY86O95711 162 aa16.47■□□□□ 0.23
ATG4D-204ENST00000586417 IGLV2-23P01705 113 aa16.47■□□□□ 0.23
ATG4D-204ENST00000586417 MYOD1P15172 320 aa16.47■□□□□ 0.23
ATG4D-204ENST00000586417 HSPE1P61604 102 aaKnown RBP16.47■□□□□ 0.23
ATG4D-204ENST00000586417 C1orf159Q96HA4 380 aa16.47■□□□□ 0.23
ATG4D-204ENST00000586417 SIRPDQ9H106 197 aa16.47■□□□□ 0.23
ATG4D-204ENST00000586417 POLR3KQ9Y2Y1 108 aaPredicted RBP16.47■□□□□ 0.23
ATG4D-204ENST00000586417 TLN2Q9Y4G6 2542 aa16.47■□□□□ 0.23
ATG4D-204ENST00000586417 CSPG4Q6UVK1 2322 aa16.47■□□□□ 0.23
ATG4D-204ENST00000586417 IGHV3-72A0A0B4J1Y9 119 aa16.46■□□□□ 0.23
ATG4D-204ENST00000586417 C15orf62A8K5M9 175 aa16.46■□□□□ 0.23
ATG4D-204ENST00000586417 ATP6V0CP27449 155 aa16.46■□□□□ 0.23
ATG4D-204ENST00000586417 HBG1P69891 147 aa16.46■□□□□ 0.23
ATG4D-204ENST00000586417 HBG2P69892 147 aa16.46■□□□□ 0.23
ATG4D-204ENST00000586417 TMEM249Q2WGJ8 235 aa16.46■□□□□ 0.23
ATG4D-204ENST00000586417 VMO1Q7Z5L0 202 aa16.46■□□□□ 0.23
ATG4D-204ENST00000586417 MS4A7Q9GZW8 240 aaPredicted RBP16.46■□□□□ 0.23
ATG4D-204ENST00000586417 TNCP24821 2201 aa16.46■□□□□ 0.23
ATG4D-204ENST00000586417 ANKRD34BA5PLL1 514 aa16.46■□□□□ 0.22
ATG4D-204ENST00000586417 TEX46H3BTG2 121 aa16.46■□□□□ 0.22
ATG4D-204ENST00000586417 SMAD7O15105 426 aaKnown RBP16.46■□□□□ 0.22
ATG4D-204ENST00000586417 KBTBD11O94819 623 aa16.46■□□□□ 0.22
ATG4D-204ENST00000586417 RPS16P62249 146 aaKnown RBP16.46■□□□□ 0.22
ATG4D-204ENST00000586417 RPEQ96AT9 228 aa16.46■□□□□ 0.22
ATG4D-204ENST00000586417 RITA1Q96K30 269 aa16.46■□□□□ 0.22
ATG4D-204ENST00000586417 TSNAXQ99598 290 aaKnown RBP16.46■□□□□ 0.22
ATG4D-204ENST00000586417 ZNF257Q9Y2Q1 563 aa16.46■□□□□ 0.22
ATG4D-204ENST00000586417 OR51B2Q9Y5P1 312 aa16.46■□□□□ 0.22
ATG4D-204ENST00000586417 INSIG2Q9Y5U4 225 aa16.46■□□□□ 0.22
ATG4D-204ENST00000586417 A0A1W2PPI3 338 aa16.45■□□□□ 0.22
ATG4D-204ENST00000586417 MFSD2BA6NFX1 497 aa16.45■□□□□ 0.22
ATG4D-204ENST00000586417 B4DSR2 109 aa16.45■□□□□ 0.22
ATG4D-204ENST00000586417 MSMBP08118 114 aa16.45■□□□□ 0.22
ATG4D-204ENST00000586417 IGHV4-31P0DP07 118 aa16.45■□□□□ 0.22
ATG4D-204ENST00000586417 SLC38A11Q08AI6 406 aa16.45■□□□□ 0.22
ATG4D-204ENST00000586417 TPTE2P1Q5T6R2 138 aa16.45■□□□□ 0.22
ATG4D-204ENST00000586417 OR8G2PQ6IF36 304 aa16.45■□□□□ 0.22
ATG4D-204ENST00000586417 RFNGQ9Y644 331 aa16.45■□□□□ 0.22
ATG4D-204ENST00000586417 ZNF705EA8MWA4 302 aaPredicted RBP16.44■□□□□ 0.22
ATG4D-204ENST00000586417 HTR1DP28221 377 aa16.44■□□□□ 0.22
ATG4D-204ENST00000586417 TMEM167AQ8TBQ9 72 aa16.44■□□□□ 0.22
ATG4D-204ENST00000586417 SAT2Q96F10 170 aaPredicted RBP16.44■□□□□ 0.22
ATG4D-204ENST00000586417 HEYLQ9NQ87 328 aaPredicted RBP16.44■□□□□ 0.22
ATG4D-204ENST00000586417 PFDN2Q9UHV9 154 aa16.44■□□□□ 0.22
ATG4D-204ENST00000586417 RNASEK-C17orf49H0YIS7 233 aa16.43■□□□□ 0.22
ATG4D-204ENST00000586417 FGF2P09038 288 aa16.43■□□□□ 0.22
ATG4D-204ENST00000586417 HOXB4P17483 251 aaPredicted RBP16.43■□□□□ 0.22
ATG4D-204ENST00000586417 HOXA1P49639 335 aaPredicted RBP16.43■□□□□ 0.22
ATG4D-204ENST00000586417 RUNX1Q01196 453 aa16.43■□□□□ 0.22
ATG4D-204ENST00000586417 MOB3BQ86TA1 216 aa16.43■□□□□ 0.22
ATG4D-204ENST00000586417 LILRB2Q8N423 598 aa16.43■□□□□ 0.22
ATG4D-204ENST00000586417 TMEM170AQ8WVE7 144 aa16.43■□□□□ 0.22
ATG4D-204ENST00000586417 DPM3Q9P2X0 92 aa16.43■□□□□ 0.22
ATG4D-204ENST00000586417 TEX50A0A1B0GTY4 177 aa16.43■□□□□ 0.22
ATG4D-204ENST00000586417 LGALS7P47929 136 aa16.43■□□□□ 0.22
ATG4D-204ENST00000586417 PRCDQ00LT1 54 aa16.43■□□□□ 0.22
ATG4D-204ENST00000586417 AANATQ16613 207 aa16.43■□□□□ 0.22
ATG4D-204ENST00000586417 THNSL2Q86YJ6 484 aa16.43■□□□□ 0.22
ATG4D-204ENST00000586417 LINC01356Q8N9X3 169 aa16.43■□□□□ 0.22
ATG4D-204ENST00000586417 OR4A5Q8NH83 315 aa16.43■□□□□ 0.22
ATG4D-204ENST00000586417 VSTM2AQ8TAG5 236 aa16.43■□□□□ 0.22
ATG4D-204ENST00000586417 HIPK2Q9H2X6 1198 aa16.43■□□□□ 0.22
ATG4D-204ENST00000586417 IFNA5P01569 189 aa16.42■□□□□ 0.22
ATG4D-204ENST00000586417 DVL1P1P54792 670 aaPredicted RBP16.42■□□□□ 0.22
ATG4D-204ENST00000586417 MRGPRG-AS1Q2M3A8 158 aa16.42■□□□□ 0.22
ATG4D-204ENST00000586417 LHFPL4Q7Z7J7 247 aa16.42■□□□□ 0.22
ATG4D-204ENST00000586417 OR10P1Q8NGE3 313 aa16.42■□□□□ 0.22
ATG4D-204ENST00000586417 OR5B3Q8NH48 314 aa16.42■□□□□ 0.22
ATG4D-204ENST00000586417 GNPNAT1Q96EK6 184 aaPredicted RBP16.42■□□□□ 0.22
ATG4D-204ENST00000586417 CLCC1Q96S66 551 aa16.42■□□□□ 0.22
ATG4D-204ENST00000586417 PARD6GQ9BYG4 376 aaPredicted RBP16.42■□□□□ 0.22
ATG4D-204ENST00000586417 HIF1ANQ9NWT6 349 aa16.42■□□□□ 0.22
ATG4D-204ENST00000586417 FKBP11Q9NYL4 201 aa16.42■□□□□ 0.22
ATG4D-204ENST00000586417 HIVEP1P15822 2718 aa16.41■□□□□ 0.22
ATG4D-204ENST00000586417 TGFAP01135 160 aa16.41■□□□□ 0.22
ATG4D-204ENST00000586417 RPL8P62917 257 aaKnown RBP16.41■□□□□ 0.22
ATG4D-204ENST00000586417 LRRC75BQ2VPJ9 315 aa16.41■□□□□ 0.22
ATG4D-204ENST00000586417 TBX15Q96SF7 602 aa16.41■□□□□ 0.22
ATG4D-204ENST00000586417 RRHO14718 337 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms