RNA–Protein interactions for RNA: ENST00000586318.1

TCF3-208, Transcript of transcription factor 3, human

TSL 3

Gene TCF3, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF3-208	ENST00000586318	C16orf95	Q9H693	158 aa		13.17	□□□□□ -0.3
TCF3-208	ENST00000586318	TMEM14B	Q9NUH8	114 aa		13.17	□□□□□ -0.3
TCF3-208	ENST00000586318	COA4	Q9NYJ1	87 aa		13.17	□□□□□ -0.3
TCF3-208	ENST00000586318	CACNG5	Q9UF02	275 aa		13.17	□□□□□ -0.3
TCF3-208	ENST00000586318	FOXA2	Q9Y261	457 aa	Predicted RBP	13.17	□□□□□ -0.3
TCF3-208	ENST00000586318	SSNA1	O43805	119 aa		13.16	□□□□□ -0.3
TCF3-208	ENST00000586318	RPL27A	P46776	148 aa	Known RBP	13.16	□□□□□ -0.3
TCF3-208	ENST00000586318	NDP	Q00604	133 aa		13.16	□□□□□ -0.3
TCF3-208	ENST00000586318	AARD	Q4LEZ3	155 aa		13.16	□□□□□ -0.3
TCF3-208	ENST00000586318	THOC7	Q6I9Y2	204 aa	Known RBP	13.16	□□□□□ -0.3
TCF3-208	ENST00000586318	OR5B3	Q8NH48	314 aa		13.16	□□□□□ -0.3
TCF3-208	ENST00000586318	ARPC1A	Q92747	370 aa		13.16	□□□□□ -0.3
TCF3-208	ENST00000586318	QTRT1	Q9BXR0	403 aa	Known RBP	13.16	□□□□□ -0.3
TCF3-208	ENST00000586318	COMMD5	Q9GZQ3	224 aa		13.16	□□□□□ -0.3
TCF3-208	ENST00000586318	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	13.16	□□□□□ -0.3
TCF3-208	ENST00000586318	ZNF580	Q9UK33	172 aa		13.16	□□□□□ -0.3
TCF3-208	ENST00000586318	ZNF257	Q9Y2Q1	563 aa		13.16	□□□□□ -0.3
TCF3-208	ENST00000586318	OR51B2	Q9Y5P1	312 aa		13.16	□□□□□ -0.3
TCF3-208	ENST00000586318	LINC01548	A6NM66	108 aa		13.15	□□□□□ -0.3
TCF3-208	ENST00000586318	RBMXL2	O75526	392 aa	Known RBP	13.15	□□□□□ -0.3
TCF3-208	ENST00000586318	MYOD1	P15172	320 aa		13.15	□□□□□ -0.3
TCF3-208	ENST00000586318	CRIP2	P52943	208 aa	Predicted RBP	13.15	□□□□□ -0.3
TCF3-208	ENST00000586318	ARSJ	Q5FYB0	599 aa	Predicted RBP	13.15	□□□□□ -0.3
TCF3-208	ENST00000586318	C10orf55	Q5SWW7	151 aa		13.15	□□□□□ -0.3
TCF3-208	ENST00000586318		Q6ZNX1	250 aa		13.15	□□□□□ -0.3
TCF3-208	ENST00000586318	OR1L8	Q8NGR8	309 aa		13.15	□□□□□ -0.3
TCF3-208	ENST00000586318	OR2T6	Q8NHC8	308 aa		13.15	□□□□□ -0.3
TCF3-208	ENST00000586318	SRSF12	Q8WXF0	261 aa	Known RBP	13.15	□□□□□ -0.3
TCF3-208	ENST00000586318	PARP11	Q9NR21	331 aa		13.15	□□□□□ -0.3
TCF3-208	ENST00000586318	CACFD1	Q9UGQ2	172 aa		13.15	□□□□□ -0.3
TCF3-208	ENST00000586318	CUBN	O60494	3623 aa		13.15	□□□□□ -0.3
TCF3-208	ENST00000586318	TET2	Q6N021	2002 aa	Predicted RBP	13.14	□□□□□ -0.31
TCF3-208	ENST00000586318	TEX50	A0A1B0GTY4	177 aa		13.14	□□□□□ -0.31
TCF3-208	ENST00000586318	MPTX1	A8MV57	137 aa		13.14	□□□□□ -0.31
TCF3-208	ENST00000586318	AP4M1	O00189	453 aa		13.14	□□□□□ -0.31
TCF3-208	ENST00000586318	CCS	O14618	274 aa		13.14	□□□□□ -0.31
TCF3-208	ENST00000586318	ATP6V0E1	O15342	81 aa		13.14	□□□□□ -0.31
TCF3-208	ENST00000586318	ST8SIA3	O43173	380 aa		13.14	□□□□□ -0.31
TCF3-208	ENST00000586318	PITX3	O75364	302 aa		13.14	□□□□□ -0.31
TCF3-208	ENST00000586318	IGF1	P05019	195 aa		13.14	□□□□□ -0.31
TCF3-208	ENST00000586318	HKR1	P10072	659 aa		13.14	□□□□□ -0.31
TCF3-208	ENST00000586318	EGR2	P11161	476 aa	Predicted RBP	13.14	□□□□□ -0.31
TCF3-208	ENST00000586318	VDAC2	P45880	294 aa	Predicted RBP	13.14	□□□□□ -0.31
TCF3-208	ENST00000586318	HSPE1	P61604	102 aa	Known RBP	13.14	□□□□□ -0.31
TCF3-208	ENST00000586318	C2orf68	Q2NKX9	166 aa		13.14	□□□□□ -0.31
TCF3-208	ENST00000586318	OR52E5	Q8NH55	327 aa		13.14	□□□□□ -0.31
TCF3-208	ENST00000586318	OR1S1	Q8NH92	325 aa		13.14	□□□□□ -0.31
TCF3-208	ENST00000586318	SGMS2	Q8NHU3	365 aa		13.14	□□□□□ -0.31
TCF3-208	ENST00000586318	GRPEL2	Q8TAA5	225 aa		13.14	□□□□□ -0.31
TCF3-208	ENST00000586318	ABHD5	Q8WTS1	349 aa		13.14	□□□□□ -0.31
TCF3-208	ENST00000586318	TAF15	Q92804	592 aa	Known RBP eCLIP	13.14	□□□□□ -0.31
TCF3-208	ENST00000586318	PDCD10	Q9BUL8	212 aa		13.14	□□□□□ -0.31
TCF3-208	ENST00000586318	FBXO7	Q9Y3I1	522 aa		13.14	□□□□□ -0.31
TCF3-208	ENST00000586318	C13orf42	A0A1B0GVH6	325 aa		13.13	□□□□□ -0.31
TCF3-208	ENST00000586318	CGB1	A6NKQ9	187 aa		13.13	□□□□□ -0.31
TCF3-208	ENST00000586318		E7EUB6	86 aa		13.13	□□□□□ -0.31
TCF3-208	ENST00000586318	GOSR2	O14653	212 aa		13.13	□□□□□ -0.31
TCF3-208	ENST00000586318	OPN1MW	P04001	364 aa		13.13	□□□□□ -0.31
TCF3-208	ENST00000586318	OPN1MW2	P0DN77	364 aa		13.13	□□□□□ -0.31
TCF3-208	ENST00000586318	OPN1MW3	P0DN78	364 aa		13.13	□□□□□ -0.31
TCF3-208	ENST00000586318	GSG1L	Q6UXU4	331 aa		13.13	□□□□□ -0.31
TCF3-208	ENST00000586318	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	13.13	□□□□□ -0.31
TCF3-208	ENST00000586318	OR5M8	Q8NGP6	311 aa		13.13	□□□□□ -0.31
TCF3-208	ENST00000586318	OR4F5	Q8NH21	305 aa		13.13	□□□□□ -0.31
TCF3-208	ENST00000586318	OR10C1	Q96KK4	312 aa		13.13	□□□□□ -0.31
TCF3-208	ENST00000586318	SRSF8	Q9BRL6	282 aa	Known RBP	13.13	□□□□□ -0.31
TCF3-208	ENST00000586318	FAM103A1	Q9BTL3	118 aa	Known RBP	13.13	□□□□□ -0.31
TCF3-208	ENST00000586318	NDUFA4L2	Q9NRX3	87 aa		13.13	□□□□□ -0.31
TCF3-208	ENST00000586318	SERTAD4	Q9NUC0	356 aa		13.13	□□□□□ -0.31
TCF3-208	ENST00000586318	C2CD3	Q4AC94	2353 aa		13.13	□□□□□ -0.31
TCF3-208	ENST00000586318	JMJD1C	Q15652	2540 aa		13.12	□□□□□ -0.31
TCF3-208	ENST00000586318		A0A1B0GW64	132 aa		13.12	□□□□□ -0.31
TCF3-208	ENST00000586318	C5orf51	A6NDU8	294 aa		13.12	□□□□□ -0.31
TCF3-208	ENST00000586318	MSGN1	A6NI15	193 aa		13.12	□□□□□ -0.31
TCF3-208	ENST00000586318	FAM25E	A8MYX2	175 aa		13.12	□□□□□ -0.31
TCF3-208	ENST00000586318	TEX22	C9J3V5	150 aa		13.12	□□□□□ -0.31
TCF3-208	ENST00000586318	TRAPPC2	P0DI81	140 aa		13.12	□□□□□ -0.31
TCF3-208	ENST00000586318	TRAPPC2B	P0DI82	140 aa		13.12	□□□□□ -0.31
TCF3-208	ENST00000586318	SPCS3	P61009	180 aa		13.12	□□□□□ -0.31
TCF3-208	ENST00000586318	PRCD	Q00LT1	54 aa		13.12	□□□□□ -0.31
TCF3-208	ENST00000586318	TMEM267	Q0VDI3	215 aa	Predicted RBP	13.12	□□□□□ -0.31
TCF3-208	ENST00000586318	IAH1	Q2TAA2	248 aa	Predicted RBP	13.12	□□□□□ -0.31
TCF3-208	ENST00000586318	TMEM95	Q3KNT9	176 aa		13.12	□□□□□ -0.31
TCF3-208	ENST00000586318	PDLIM3	Q53GG5	364 aa	Predicted RBP	13.12	□□□□□ -0.31
TCF3-208	ENST00000586318	STPG2	Q8N412	459 aa		13.12	□□□□□ -0.31
TCF3-208	ENST00000586318	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	13.12	□□□□□ -0.31
TCF3-208	ENST00000586318	TMEM68	Q96MH6	324 aa		13.12	□□□□□ -0.31
TCF3-208	ENST00000586318	FYTTD1	Q96QD9	318 aa	Known RBP	13.12	□□□□□ -0.31
TCF3-208	ENST00000586318	MED28	Q9H204	178 aa		13.12	□□□□□ -0.31
TCF3-208	ENST00000586318	FAM90A26	D6RGX4	464 aa		13.11	□□□□□ -0.31
TCF3-208	ENST00000586318	IFNA17	P01571	189 aa		13.11	□□□□□ -0.31
TCF3-208	ENST00000586318	RRAS2	P62070	204 aa	Predicted RBP	13.11	□□□□□ -0.31
TCF3-208	ENST00000586318	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	13.11	□□□□□ -0.31
TCF3-208	ENST00000586318	OR4D5	Q8NGN0	318 aa		13.11	□□□□□ -0.31
TCF3-208	ENST00000586318	LINC01006	Q8NI28	216 aa		13.11	□□□□□ -0.31
TCF3-208	ENST00000586318	C2orf50	Q96LR7	162 aa		13.11	□□□□□ -0.31
TCF3-208	ENST00000586318	MGAT4C	Q9UBM8	478 aa		13.11	□□□□□ -0.31
TCF3-208	ENST00000586318	HSPB7	Q9UBY9	170 aa		13.11	□□□□□ -0.31
TCF3-208	ENST00000586318	TRAV41	A0A0B4J266	112 aa		13.1	□□□□□ -0.31
TCF3-208	ENST00000586318		A0A1W2PN81	502 aa		13.1	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms