RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 A0A0B4J2A0 478 aa11.49□□□□□ -0.57
SCAMP4-209ENST00000585335 C9orf170A2RU37 121 aa11.49□□□□□ -0.57
SCAMP4-209ENST00000585335 LINC01548A6NM66 108 aa11.49□□□□□ -0.57
SCAMP4-209ENST00000585335 DUS4LO95620 317 aaKnown RBP11.49□□□□□ -0.57
SCAMP4-209ENST00000585335 IGKV1-5P01602 117 aa11.49□□□□□ -0.57
SCAMP4-209ENST00000585335 IL6RP08887 468 aaPredicted RBP11.49□□□□□ -0.57
SCAMP4-209ENST00000585335 CRIP2P52943 208 aaPredicted RBP11.49□□□□□ -0.57
SCAMP4-209ENST00000585335 NDPQ00604 133 aa11.49□□□□□ -0.57
SCAMP4-209ENST00000585335 DHRS2Q13268 280 aa11.49□□□□□ -0.57
SCAMP4-209ENST00000585335 THOC7Q6I9Y2 204 aaKnown RBP11.49□□□□□ -0.57
SCAMP4-209ENST00000585335 UNQ5815/PRO19632Q6UWF5 114 aa11.49□□□□□ -0.57
SCAMP4-209ENST00000585335 MRPL41Q8IXM3 137 aaKnown RBP11.49□□□□□ -0.57
SCAMP4-209ENST00000585335 SLC35G3Q8N808 338 aa11.49□□□□□ -0.57
SCAMP4-209ENST00000585335 OR5AU1Q8NGC0 362 aa11.49□□□□□ -0.57
SCAMP4-209ENST00000585335 LSM10Q969L4 123 aaKnown RBP11.49□□□□□ -0.57
SCAMP4-209ENST00000585335 MDFIQ99750 246 aa11.49□□□□□ -0.57
SCAMP4-209ENST00000585335 PDCD10Q9BUL8 212 aa11.49□□□□□ -0.57
SCAMP4-209ENST00000585335 GPN1Q9HCN4 374 aaPredicted RBP11.49□□□□□ -0.57
SCAMP4-209ENST00000585335 CACFD1Q9UGQ2 172 aa11.49□□□□□ -0.57
SCAMP4-209ENST00000585335 SHPKQ9UHJ6 478 aa11.49□□□□□ -0.57
SCAMP4-209ENST00000585335 OR51B2Q9Y5P1 312 aa11.49□□□□□ -0.57
SCAMP4-209ENST00000585335 WSB1Q9Y6I7 421 aa11.49□□□□□ -0.57
SCAMP4-209ENST00000585335 MSGN1A6NI15 193 aa11.48□□□□□ -0.57
SCAMP4-209ENST00000585335 C15orf61A6NNL5 157 aa11.48□□□□□ -0.57
SCAMP4-209ENST00000585335 FBXO24O75426 580 aa11.48□□□□□ -0.57
SCAMP4-209ENST00000585335 OR9G9P0C7N8 305 aa11.48□□□□□ -0.57
SCAMP4-209ENST00000585335 OR2B8PP59922 312 aa11.48□□□□□ -0.57
SCAMP4-209ENST00000585335 MRGPRG-AS1Q2M3A8 158 aa11.48□□□□□ -0.57
SCAMP4-209ENST00000585335 AKIRIN2Q53H80 203 aa11.48□□□□□ -0.57
SCAMP4-209ENST00000585335 TEX38Q6PEX7 206 aa11.48□□□□□ -0.57
SCAMP4-209ENST00000585335 LRTM2Q8N967 370 aa11.48□□□□□ -0.57
SCAMP4-209ENST00000585335 OR1L8Q8NGR8 309 aa11.48□□□□□ -0.57
SCAMP4-209ENST00000585335 OR5B3Q8NH48 314 aa11.48□□□□□ -0.57
SCAMP4-209ENST00000585335 LHFPL5Q8TAF8 219 aa11.48□□□□□ -0.57
SCAMP4-209ENST00000585335 FYTTD1Q96QD9 318 aaKnown RBP11.48□□□□□ -0.57
SCAMP4-209ENST00000585335 FAM103A1Q9BTL3 118 aaKnown RBP11.48□□□□□ -0.57
SCAMP4-209ENST00000585335 FOXA2Q9Y261 457 aaPredicted RBP11.48□□□□□ -0.57
SCAMP4-209ENST00000585335 TRAV3A0A0B4J244 114 aa11.47□□□□□ -0.57
SCAMP4-209ENST00000585335 PRAF2O60831 178 aa11.47□□□□□ -0.57
SCAMP4-209ENST00000585335 DHFRP00374 187 aa11.47□□□□□ -0.57
SCAMP4-209ENST00000585335 IFNA21P01568 189 aa11.47□□□□□ -0.57
SCAMP4-209ENST00000585335 TRAPPC2P0DI81 140 aa11.47□□□□□ -0.57
SCAMP4-209ENST00000585335 TRAPPC2BP0DI82 140 aa11.47□□□□□ -0.57
SCAMP4-209ENST00000585335 MECP2P51608 486 aaKnown RBP11.47□□□□□ -0.57
SCAMP4-209ENST00000585335 ANKRD55Q3KP44 614 aa11.47□□□□□ -0.57
SCAMP4-209ENST00000585335 C10orf55Q5SWW7 151 aa11.47□□□□□ -0.57
SCAMP4-209ENST00000585335 TMEM65Q6PI78 240 aa11.47□□□□□ -0.57
SCAMP4-209ENST00000585335 HSD17B13Q7Z5P4 300 aaPredicted RBP11.47□□□□□ -0.57
SCAMP4-209ENST00000585335 ZNF329Q86UD4 541 aa11.47□□□□□ -0.57
SCAMP4-209ENST00000585335 LFNGQ8NES3 379 aa11.47□□□□□ -0.57
SCAMP4-209ENST00000585335 OR5M8Q8NGP6 311 aa11.47□□□□□ -0.57
SCAMP4-209ENST00000585335 SRSF8Q9BRL6 282 aaKnown RBP11.47□□□□□ -0.57
SCAMP4-209ENST00000585335 ZNF747Q9BV97 191 aa11.47□□□□□ -0.57
SCAMP4-209ENST00000585335 QTRT1Q9BXR0 403 aaKnown RBP11.47□□□□□ -0.57
SCAMP4-209ENST00000585335 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.47□□□□□ -0.57
SCAMP4-209ENST00000585335 TMEM14BQ9NUH8 114 aa11.47□□□□□ -0.57
SCAMP4-209ENST00000585335 PRR13Q9NZ81 148 aa11.47□□□□□ -0.57
SCAMP4-209ENST00000585335 ZNF257Q9Y2Q1 563 aa11.47□□□□□ -0.57
SCAMP4-209ENST00000585335 NSG2Q9Y328 171 aa11.47□□□□□ -0.57
SCAMP4-209ENST00000585335 FBXO7Q9Y3I1 522 aa11.47□□□□□ -0.57
SCAMP4-209ENST00000585335 TMED3Q9Y3Q3 217 aa11.47□□□□□ -0.57
SCAMP4-209ENST00000585335 A0A1W2PN81 502 aa11.46□□□□□ -0.57
SCAMP4-209ENST00000585335 INMT-MINDY4F8WBC2 141 aa11.46□□□□□ -0.57
SCAMP4-209ENST00000585335 G3V318 75 aa11.46□□□□□ -0.57
SCAMP4-209ENST00000585335 OPN1MWP04001 364 aa11.46□□□□□ -0.57
SCAMP4-209ENST00000585335 P0C879 139 aa11.46□□□□□ -0.57
SCAMP4-209ENST00000585335 SULT1A3P0DMM9 295 aa11.46□□□□□ -0.57
SCAMP4-209ENST00000585335 SULT1A4P0DMN0 295 aa11.46□□□□□ -0.57
SCAMP4-209ENST00000585335 OPN1MW2P0DN77 364 aa11.46□□□□□ -0.57
SCAMP4-209ENST00000585335 OPN1MW3P0DN78 364 aa11.46□□□□□ -0.57
SCAMP4-209ENST00000585335 EGR2P11161 476 aaPredicted RBP11.46□□□□□ -0.57
SCAMP4-209ENST00000585335 CHRNA7P36544 502 aa11.46□□□□□ -0.57
SCAMP4-209ENST00000585335 SSBP2P81877 361 aaPredicted RBP11.46□□□□□ -0.57
SCAMP4-209ENST00000585335 FOXE3Q13461 319 aa11.46□□□□□ -0.57
SCAMP4-209ENST00000585335 RGS21Q2M5E4 152 aa11.46□□□□□ -0.57
SCAMP4-209ENST00000585335 CXorf66Q5JRM2 361 aaPredicted RBP11.46□□□□□ -0.57
SCAMP4-209ENST00000585335 SHISA2Q6UWI4 295 aa11.46□□□□□ -0.57
SCAMP4-209ENST00000585335 LYZL2Q7Z4W2 148 aa11.46□□□□□ -0.57
SCAMP4-209ENST00000585335 ZNF431Q8TF32 576 aaPredicted RBP11.46□□□□□ -0.57
SCAMP4-209ENST00000585335 HINT2Q9BX68 163 aa11.46□□□□□ -0.57
SCAMP4-209ENST00000585335 FBN1P35555 2871 aaKnown RBP11.46□□□□□ -0.57
SCAMP4-209ENST00000585335 TEX50A0A1B0GTY4 177 aa11.45□□□□□ -0.58
SCAMP4-209ENST00000585335 IFNA17P01571 189 aa11.45□□□□□ -0.58
SCAMP4-209ENST00000585335 IGHG4P01861 327 aa11.45□□□□□ -0.58
SCAMP4-209ENST00000585335 IL5P05113 134 aa11.45□□□□□ -0.58
SCAMP4-209ENST00000585335 ELANEP08246 267 aa11.45□□□□□ -0.58
SCAMP4-209ENST00000585335 HSPE1P61604 102 aaKnown RBP11.45□□□□□ -0.58
SCAMP4-209ENST00000585335 CFHR3Q02985 330 aa11.45□□□□□ -0.58
SCAMP4-209ENST00000585335 SMCO1Q147U7 214 aa11.45□□□□□ -0.58
SCAMP4-209ENST00000585335 KHDC1LQ5JSQ8 128 aa11.45□□□□□ -0.58
SCAMP4-209ENST00000585335 ZNF429Q86V71 674 aa11.45□□□□□ -0.58
SCAMP4-209ENST00000585335 MINDY2Q8NBR6 621 aa11.45□□□□□ -0.58
SCAMP4-209ENST00000585335 FAM110DQ8TAY7 271 aaPredicted RBP11.45□□□□□ -0.58
SCAMP4-209ENST00000585335 MITD1Q8WV92 249 aa11.45□□□□□ -0.58
SCAMP4-209ENST00000585335 MARVELD1Q9BSK0 173 aa11.45□□□□□ -0.58
SCAMP4-209ENST00000585335 ENY2Q9NPA8 101 aa11.45□□□□□ -0.58
SCAMP4-209ENST00000585335 ZNF355PQ9NSJ1 428 aa11.45□□□□□ -0.58
SCAMP4-209ENST00000585335 COA4Q9NYJ1 87 aa11.45□□□□□ -0.58
SCAMP4-209ENST00000585335 CACNG5Q9UF02 275 aa11.45□□□□□ -0.58
SCAMP4-209ENST00000585335 A0A0B4J293 547 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms