RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 AIFM2Q9BRQ8 373 aa15.42■□□□□ 0.06
TOP3A-219ENST00000584887 SRD5A3Q9H8P0 318 aa15.42■□□□□ 0.06
TOP3A-219ENST00000584887 IFT46Q9NQC8 304 aa15.42■□□□□ 0.06
TOP3A-219ENST00000584887 ZC4H2Q9NQZ6 224 aa15.42■□□□□ 0.06
TOP3A-219ENST00000584887 BET1LQ9NYM9 111 aa15.42■□□□□ 0.06
TOP3A-219ENST00000584887 TECRQ9NZ01 308 aaKnown RBP15.42■□□□□ 0.06
TOP3A-219ENST00000584887 DMRT1Q9Y5R6 373 aa15.42■□□□□ 0.06
TOP3A-219ENST00000584887 A0A0A6YYH2 397 aa15.41■□□□□ 0.06
TOP3A-219ENST00000584887 A6NJ64 397 aa15.41■□□□□ 0.06
TOP3A-219ENST00000584887 LGALS9O00182 355 aa15.41■□□□□ 0.06
TOP3A-219ENST00000584887 CRYGCP07315 174 aa15.41■□□□□ 0.06
TOP3A-219ENST00000584887 RPA2P15927 270 aa15.41■□□□□ 0.06
TOP3A-219ENST00000584887 HIST1H1BP16401 226 aaKnown RBP15.41■□□□□ 0.06
TOP3A-219ENST00000584887 CTRB1P17538 263 aa15.41■□□□□ 0.06
TOP3A-219ENST00000584887 HERV-K104P61576 105 aa15.41■□□□□ 0.06
TOP3A-219ENST00000584887 MSMO1Q15800 293 aa15.41■□□□□ 0.06
TOP3A-219ENST00000584887 FAM106AQ4KMX7 169 aa15.41■□□□□ 0.06
TOP3A-219ENST00000584887 AADACL3Q5VUY0 350 aa15.41■□□□□ 0.06
TOP3A-219ENST00000584887 CTRB2Q6GPI1 263 aa15.41■□□□□ 0.06
TOP3A-219ENST00000584887 ZBTB34Q8NCN2 500 aa15.41■□□□□ 0.06
TOP3A-219ENST00000584887 MFSD2BA6NFX1 497 aa15.4■□□□□ 0.06
TOP3A-219ENST00000584887 OR11H12B2RN74 326 aa15.4■□□□□ 0.06
TOP3A-219ENST00000584887 GPHB5Q86YW7 130 aa15.4■□□□□ 0.06
TOP3A-219ENST00000584887 DMBX1Q8NFW5 382 aa15.4■□□□□ 0.06
TOP3A-219ENST00000584887 HIPK2Q9H2X6 1198 aa15.4■□□□□ 0.06
TOP3A-219ENST00000584887 TRAV3A0A0B4J244 114 aa15.39■□□□□ 0.05
TOP3A-219ENST00000584887 RBMY1BA6NDE4 496 aaKnown RBP15.39■□□□□ 0.05
TOP3A-219ENST00000584887 RBMY1EA6NEQ0 496 aaKnown RBP15.39■□□□□ 0.05
TOP3A-219ENST00000584887 CGB1A6NKQ9 187 aa15.39■□□□□ 0.05
TOP3A-219ENST00000584887 RBFOX2O43251 390 aaKnown RBP eCLIP15.39■□□□□ 0.05
TOP3A-219ENST00000584887 RBMY1DP0C7P1 496 aaKnown RBP15.39■□□□□ 0.05
TOP3A-219ENST00000584887 NQO2P16083 231 aa15.39■□□□□ 0.05
TOP3A-219ENST00000584887 CBLN1P23435 193 aa15.39■□□□□ 0.05
TOP3A-219ENST00000584887 CBX5P45973 191 aa15.39■□□□□ 0.05
TOP3A-219ENST00000584887 TAS2R31P59538 309 aa15.39■□□□□ 0.05
TOP3A-219ENST00000584887 OR2B8PP59922 312 aa15.39■□□□□ 0.05
TOP3A-219ENST00000584887 ZNF57Q68EA5 555 aaPredicted RBP15.39■□□□□ 0.05
TOP3A-219ENST00000584887 ZNF818PQ6ZRF7 136 aa15.39■□□□□ 0.05
TOP3A-219ENST00000584887 COMMD5Q9GZQ3 224 aa15.39■□□□□ 0.05
TOP3A-219ENST00000584887 EHFQ9NZC4 300 aa15.39■□□□□ 0.05
TOP3A-219ENST00000584887 DNAH7Q8WXX0 4024 aa15.38■□□□□ 0.05
TOP3A-219ENST00000584887 IGLV11-55A0A075B6I3 123 aa15.38■□□□□ 0.05
TOP3A-219ENST00000584887 TMEM213A2RRL7 107 aa15.38■□□□□ 0.05
TOP3A-219ENST00000584887 UPK2O00526 184 aa15.38■□□□□ 0.05
TOP3A-219ENST00000584887 S1PR2O95136 353 aa15.38■□□□□ 0.05
TOP3A-219ENST00000584887 HPRT1P00492 218 aa15.38■□□□□ 0.05
TOP3A-219ENST00000584887 GPR183P32249 361 aa15.38■□□□□ 0.05
TOP3A-219ENST00000584887 SLC16A13Q7RTY0 426 aa15.38■□□□□ 0.05
TOP3A-219ENST00000584887 TMEM61Q8N0U2 210 aa15.38■□□□□ 0.05
TOP3A-219ENST00000584887 UXS1Q8NBZ7 420 aa15.38■□□□□ 0.05
TOP3A-219ENST00000584887 OR5AP2Q8NGF4 316 aa15.38■□□□□ 0.05
TOP3A-219ENST00000584887 CXorf58Q96LI9 332 aa15.38■□□□□ 0.05
TOP3A-219ENST00000584887 TMEM140Q9NV12 185 aa15.38■□□□□ 0.05
TOP3A-219ENST00000584887 TRBV7-1A0A0A6YYK4 115 aa15.37■□□□□ 0.05
TOP3A-219ENST00000584887 IGHV3-35A0A0C4DH35 117 aa15.37■□□□□ 0.05
TOP3A-219ENST00000584887 SCAF4O95104 1147 aaKnown RBP15.37■□□□□ 0.05
TOP3A-219ENST00000584887 CLEC3BP05452 202 aa15.37■□□□□ 0.05
TOP3A-219ENST00000584887 TGFBR1P36897 503 aa15.37■□□□□ 0.05
TOP3A-219ENST00000584887 ERVK-16P61578 105 aa15.37■□□□□ 0.05
TOP3A-219ENST00000584887 LINC00322Q6ZN03 302 aaPredicted RBP15.37■□□□□ 0.05
TOP3A-219ENST00000584887 GIMAP1Q8WWP7 306 aa15.37■□□□□ 0.05
TOP3A-219ENST00000584887 MLXQ9UH92 298 aa15.37■□□□□ 0.05
TOP3A-219ENST00000584887 DYNC2H1Q8NCM8 4307 aaKnown RBP15.37■□□□□ 0.05
TOP3A-219ENST00000584887 IGLC7A0M8Q6 106 aa15.36■□□□□ 0.05
TOP3A-219ENST00000584887 KCTD21Q4G0X4 260 aa15.36■□□□□ 0.05
TOP3A-219ENST00000584887 TM4SF20Q53R12 229 aa15.36■□□□□ 0.05
TOP3A-219ENST00000584887 BTNL8Q6UX41 500 aa15.36■□□□□ 0.05
TOP3A-219ENST00000584887 OR52B4Q8NGK2 314 aa15.36■□□□□ 0.05
TOP3A-219ENST00000584887 CD300LFQ8TDQ1 290 aa15.36■□□□□ 0.05
TOP3A-219ENST00000584887 S100A16Q96FQ6 103 aaKnown RBP15.36■□□□□ 0.05
TOP3A-219ENST00000584887 QTRT1Q9BXR0 403 aaKnown RBP15.36■□□□□ 0.05
TOP3A-219ENST00000584887 A8MWP6 167 aa15.35■□□□□ 0.05
TOP3A-219ENST00000584887 XRCC3O43542 346 aa15.35■□□□□ 0.05
TOP3A-219ENST00000584887 RLN1P04808 185 aa15.35■□□□□ 0.05
TOP3A-219ENST00000584887 POU2AF1Q16633 256 aa15.35■□□□□ 0.05
TOP3A-219ENST00000584887 TMEM69Q5SWH9 247 aa15.35■□□□□ 0.05
TOP3A-219ENST00000584887 PLET1Q6UQ28 207 aa15.35■□□□□ 0.05
TOP3A-219ENST00000584887 UNQ9165/PRO28630Q6UXU0 137 aa15.35■□□□□ 0.05
TOP3A-219ENST00000584887 OR10W1Q8NGF6 305 aa15.35■□□□□ 0.05
TOP3A-219ENST00000584887 HINT2Q9BX68 163 aa15.35■□□□□ 0.05
TOP3A-219ENST00000584887 PLEKHA2Q9HB19 425 aa15.35■□□□□ 0.05
TOP3A-219ENST00000584887 COMMD9Q9P000 198 aa15.35■□□□□ 0.05
TOP3A-219ENST00000584887 PMP2P02689 132 aa15.34■□□□□ 0.05
TOP3A-219ENST00000584887 RFX2P48378 723 aa15.34■□□□□ 0.05
TOP3A-219ENST00000584887 LSM3P62310 102 aaKnown RBP15.34■□□□□ 0.05
TOP3A-219ENST00000584887 KLK9Q2XQG4 91 aa15.34■□□□□ 0.05
TOP3A-219ENST00000584887 UBE2NLQ5JXB2 153 aa15.34■□□□□ 0.05
TOP3A-219ENST00000584887 SAMD12Q8N8I0 201 aa15.34■□□□□ 0.05
TOP3A-219ENST00000584887 OR5H2Q8NGV7 314 aa15.34■□□□□ 0.05
TOP3A-219ENST00000584887 ZNF502Q8TBZ5 544 aa15.34■□□□□ 0.05
TOP3A-219ENST00000584887 BORCS5Q969J3 196 aa15.34■□□□□ 0.05
TOP3A-219ENST00000584887 ZNF2Q9BSG1 426 aaPredicted RBP15.34■□□□□ 0.05
TOP3A-219ENST00000584887 THYN1Q9P016 225 aa15.34■□□□□ 0.05
TOP3A-219ENST00000584887 KLK9Q9UKQ9 250 aa15.34■□□□□ 0.05
TOP3A-219ENST00000584887 CYB5BO43169 146 aa15.33■□□□□ 0.04
TOP3A-219ENST00000584887 TRAPPC2P0DI81 140 aa15.33■□□□□ 0.04
TOP3A-219ENST00000584887 TRAPPC2BP0DI82 140 aa15.33■□□□□ 0.04
TOP3A-219ENST00000584887 OR13C7P0DN81 318 aa15.33■□□□□ 0.04
TOP3A-219ENST00000584887 GNRHRP30968 328 aa15.33■□□□□ 0.04
TOP3A-219ENST00000584887 TAS2R20P59543 309 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms