RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 THNSL2Q86YJ6 484 aa11.22□□□□□ -0.61
UBBP4-202ENST00000584755 ST8SIA2Q92186 375 aa11.22□□□□□ -0.61
UBBP4-202ENST00000584755 ZNF471Q9BX82 626 aaPredicted RBP11.22□□□□□ -0.61
UBBP4-202ENST00000584755 C7orf69Q9H7B7 122 aa11.22□□□□□ -0.61
UBBP4-202ENST00000584755 NUP50Q9UKX7 468 aa11.22□□□□□ -0.61
UBBP4-202ENST00000584755 CR1P17927 2039 aa11.22□□□□□ -0.61
UBBP4-202ENST00000584755 CSMD1Q96PZ7 3565 aa11.21□□□□□ -0.61
UBBP4-202ENST00000584755 TEX50A0A1B0GTY4 177 aa11.21□□□□□ -0.61
UBBP4-202ENST00000584755 INS-IGF2F8WCM5 200 aa11.21□□□□□ -0.61
UBBP4-202ENST00000584755 H3BP45 60 aa11.21□□□□□ -0.61
UBBP4-202ENST00000584755 MOSP00540 346 aa11.21□□□□□ -0.61
UBBP4-202ENST00000584755 IFNA7P01567 189 aa11.21□□□□□ -0.61
UBBP4-202ENST00000584755 IGHV4-31P0DP07 118 aa11.21□□□□□ -0.61
UBBP4-202ENST00000584755 CNTFRP26992 372 aa11.21□□□□□ -0.61
UBBP4-202ENST00000584755 PRCDQ00LT1 54 aa11.21□□□□□ -0.61
UBBP4-202ENST00000584755 EXOSC2Q13868 293 aaKnown RBP11.21□□□□□ -0.61
UBBP4-202ENST00000584755 TMEM249Q2WGJ8 235 aa11.21□□□□□ -0.61
UBBP4-202ENST00000584755 STX12Q86Y82 276 aa11.21□□□□□ -0.61
UBBP4-202ENST00000584755 Q8N6K4 173 aa11.21□□□□□ -0.61
UBBP4-202ENST00000584755 NPBQ8NG41 125 aa11.21□□□□□ -0.61
UBBP4-202ENST00000584755 OR4C12Q96R67 309 aa11.21□□□□□ -0.61
UBBP4-202ENST00000584755 FOXC2Q99958 501 aa11.21□□□□□ -0.61
UBBP4-202ENST00000584755 ZNF430Q9H8G1 570 aaPredicted RBP11.21□□□□□ -0.61
UBBP4-202ENST00000584755 WFDC1Q9HC57 220 aa11.21□□□□□ -0.61
UBBP4-202ENST00000584755 ITGB1BP2Q9UKP3 347 aa11.21□□□□□ -0.61
UBBP4-202ENST00000584755 SIGLEC9Q9Y336 463 aa11.21□□□□□ -0.61
UBBP4-202ENST00000584755 TNCP24821 2201 aa11.2□□□□□ -0.62
UBBP4-202ENST00000584755 PRRC2AP48634 2157 aaKnown RBP11.2□□□□□ -0.62
UBBP4-202ENST00000584755 TRAV40A0A0B4J280 105 aa11.2□□□□□ -0.62
UBBP4-202ENST00000584755 PMS2P5A8MQ11 134 aa11.2□□□□□ -0.62
UBBP4-202ENST00000584755 JTBO76095 146 aa11.2□□□□□ -0.62
UBBP4-202ENST00000584755 NDUFA3O95167 84 aa11.2□□□□□ -0.62
UBBP4-202ENST00000584755 IGKV1D-33P01593 117 aa11.2□□□□□ -0.62
UBBP4-202ENST00000584755 IGKV1-33P01594 117 aa11.2□□□□□ -0.62
UBBP4-202ENST00000584755 MYOD1P15172 320 aa11.2□□□□□ -0.62
UBBP4-202ENST00000584755 PAX6P26367 422 aa11.2□□□□□ -0.62
UBBP4-202ENST00000584755 SPINK9Q5DT21 86 aa11.2□□□□□ -0.62
UBBP4-202ENST00000584755 CLEC9AQ6UXN8 241 aa11.2□□□□□ -0.62
UBBP4-202ENST00000584755 HAPLN4Q86UW8 402 aa11.2□□□□□ -0.62
UBBP4-202ENST00000584755 MMD2Q8IY49 270 aa11.2□□□□□ -0.62
UBBP4-202ENST00000584755 UBAC2Q8NBM4 344 aa11.2□□□□□ -0.62
UBBP4-202ENST00000584755 OR2T10Q8NGZ9 312 aa11.2□□□□□ -0.62
UBBP4-202ENST00000584755 PHYHIPLQ96FC7 376 aa11.2□□□□□ -0.62
UBBP4-202ENST00000584755 EAF1Q96JC9 268 aaPredicted RBP11.2□□□□□ -0.62
UBBP4-202ENST00000584755 ARV1Q9H2C2 271 aa11.2□□□□□ -0.62
UBBP4-202ENST00000584755 TPSG1Q9NRR2 321 aa11.2□□□□□ -0.62
UBBP4-202ENST00000584755 NDUFA4L2Q9NRX3 87 aa11.2□□□□□ -0.62
UBBP4-202ENST00000584755 RRHO14718 337 aa11.19□□□□□ -0.62
UBBP4-202ENST00000584755 CST7O76096 145 aa11.19□□□□□ -0.62
UBBP4-202ENST00000584755 AVPP01185 164 aa11.19□□□□□ -0.62
UBBP4-202ENST00000584755 SNRNP70P08621 437 aaKnown RBP11.19□□□□□ -0.62
UBBP4-202ENST00000584755 TPT1P13693 172 aaKnown RBP11.19□□□□□ -0.62
UBBP4-202ENST00000584755 MAS1LP35410 378 aa11.19□□□□□ -0.62
UBBP4-202ENST00000584755 DYNLT3P51808 116 aa11.19□□□□□ -0.62
UBBP4-202ENST00000584755 EIF5AP63241 154 aaKnown RBP11.19□□□□□ -0.62
UBBP4-202ENST00000584755 TMEM267Q0VDI3 215 aaPredicted RBP11.19□□□□□ -0.62
UBBP4-202ENST00000584755 PRSS8Q16651 343 aa11.19□□□□□ -0.62
UBBP4-202ENST00000584755 KLF17Q5JT82 389 aaPredicted RBP11.19□□□□□ -0.62
UBBP4-202ENST00000584755 SPANXN5Q5MJ07 72 aa11.19□□□□□ -0.62
UBBP4-202ENST00000584755 RPL7L1Q6DKI1 246 aaKnown RBP11.19□□□□□ -0.62
UBBP4-202ENST00000584755 MAPK1IP1LQ8NDC0 245 aa11.19□□□□□ -0.62
UBBP4-202ENST00000584755 OR5C1Q8NGR4 320 aa11.19□□□□□ -0.62
UBBP4-202ENST00000584755 OR1L8Q8NGR8 309 aa11.19□□□□□ -0.62
UBBP4-202ENST00000584755 SMIM3Q9BZL3 60 aa11.19□□□□□ -0.62
UBBP4-202ENST00000584755 COMMD5Q9GZQ3 224 aa11.19□□□□□ -0.62
UBBP4-202ENST00000584755 HIPK2Q9H2X6 1198 aa11.19□□□□□ -0.62
UBBP4-202ENST00000584755 STRAPQ9Y3F4 350 aaKnown RBP11.19□□□□□ -0.62
UBBP4-202ENST00000584755 ITPR2Q14571 2701 aa11.19□□□□□ -0.62
UBBP4-202ENST00000584755 CREBBPQ92793 2442 aa11.19□□□□□ -0.62
UBBP4-202ENST00000584755 SVEP1Q4LDE5 3571 aa11.19□□□□□ -0.62
UBBP4-202ENST00000584755 CGB1A6NKQ9 187 aa11.19□□□□□ -0.62
UBBP4-202ENST00000584755 C15orf62A8K5M9 175 aa11.19□□□□□ -0.62
UBBP4-202ENST00000584755 NBR2O15453 112 aa11.19□□□□□ -0.62
UBBP4-202ENST00000584755 SCAF4O95104 1147 aaKnown RBP11.19□□□□□ -0.62
UBBP4-202ENST00000584755 METTL15P1P0C7V9 234 aa11.19□□□□□ -0.62
UBBP4-202ENST00000584755 IGHV4-38-2P0DP08 117 aa11.19□□□□□ -0.62
UBBP4-202ENST00000584755 BRS3P32247 399 aa11.19□□□□□ -0.62
UBBP4-202ENST00000584755 HOXA1P49639 335 aaPredicted RBP11.19□□□□□ -0.62
UBBP4-202ENST00000584755 ARL16Q0P5N6 197 aa11.19□□□□□ -0.62
UBBP4-202ENST00000584755 FBLN7Q53RD9 439 aa11.19□□□□□ -0.62
UBBP4-202ENST00000584755 RUSC1-AS1Q66K80 236 aa11.19□□□□□ -0.62
UBBP4-202ENST00000584755 PPP1R27Q86WC6 154 aa11.19□□□□□ -0.62
UBBP4-202ENST00000584755 BAP18Q8IXM2 172 aa11.19□□□□□ -0.62
UBBP4-202ENST00000584755 SCARB1Q8WTV0 552 aa11.19□□□□□ -0.62
UBBP4-202ENST00000584755 CLCC1Q96S66 551 aa11.19□□□□□ -0.62
UBBP4-202ENST00000584755 MEGF9Q9H1U4 602 aa11.19□□□□□ -0.62
UBBP4-202ENST00000584755 METTL1Q9UBP6 276 aaKnown RBP11.19□□□□□ -0.62
UBBP4-202ENST00000584755 UBQLN2Q9UHD9 624 aa11.19□□□□□ -0.62
UBBP4-202ENST00000584755 TGFAP01135 160 aa11.18□□□□□ -0.62
UBBP4-202ENST00000584755 F2RL1P55085 397 aa11.18□□□□□ -0.62
UBBP4-202ENST00000584755 ATP5IP56385 69 aaPredicted RBP11.18□□□□□ -0.62
UBBP4-202ENST00000584755 RPP30P78346 268 aaKnown RBP11.18□□□□□ -0.62
UBBP4-202ENST00000584755 PJVKQ0ZLH3 352 aa11.18□□□□□ -0.62
UBBP4-202ENST00000584755 BSXQ3C1V8 233 aa11.18□□□□□ -0.62
UBBP4-202ENST00000584755 WFDC11Q8NEX6 87 aa11.18□□□□□ -0.62
UBBP4-202ENST00000584755 OR1S2Q8NGQ3 325 aa11.18□□□□□ -0.62
UBBP4-202ENST00000584755 TMEM170AQ8WVE7 144 aa11.18□□□□□ -0.62
UBBP4-202ENST00000584755 PLEKHA3Q9HB20 300 aa11.18□□□□□ -0.62
UBBP4-202ENST00000584755 HEYLQ9NQ87 328 aaPredicted RBP11.18□□□□□ -0.62
UBBP4-202ENST00000584755 HECTD1Q9ULT8 2610 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms