RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 CTRB2Q6GPI1 263 aa10.05□□□□□ -0.8
ERBB2-220ENST00000584684 THOC7Q6I9Y2 204 aaKnown RBP10.05□□□□□ -0.8
ERBB2-220ENST00000584684 IL34Q6ZMJ4 242 aa10.05□□□□□ -0.8
ERBB2-220ENST00000584684 SNX29P2Q8IUI4 249 aa10.05□□□□□ -0.8
ERBB2-220ENST00000584684 FYTTD1Q96QD9 318 aaKnown RBP10.05□□□□□ -0.8
ERBB2-220ENST00000584684 HRASLSQ9HDD0 168 aa10.05□□□□□ -0.8
ERBB2-220ENST00000584684 TMEM140Q9NV12 185 aa10.05□□□□□ -0.8
ERBB2-220ENST00000584684 IGLC7A0M8Q6 106 aa10.04□□□□□ -0.8
ERBB2-220ENST00000584684 DPPA5A6NC42 116 aa10.04□□□□□ -0.8
ERBB2-220ENST00000584684 MARCH11A6NNE9 402 aa10.04□□□□□ -0.8
ERBB2-220ENST00000584684 GPR31O00270 319 aa10.04□□□□□ -0.8
ERBB2-220ENST00000584684 UPK2O00526 184 aa10.04□□□□□ -0.8
ERBB2-220ENST00000584684 AREGP15514 252 aa10.04□□□□□ -0.8
ERBB2-220ENST00000584684 HIST1H1BP16401 226 aaKnown RBP10.04□□□□□ -0.8
ERBB2-220ENST00000584684 TBPP20226 339 aa10.04□□□□□ -0.8
ERBB2-220ENST00000584684 HLA-DMAP28067 261 aa10.04□□□□□ -0.8
ERBB2-220ENST00000584684 PSMB6P28072 239 aa10.04□□□□□ -0.8
ERBB2-220ENST00000584684 SYNJ2BPP57105 145 aa10.04□□□□□ -0.8
ERBB2-220ENST00000584684 TATDN3Q17R31 274 aa10.04□□□□□ -0.8
ERBB2-220ENST00000584684 LPCAT3Q6P1A2 487 aa10.04□□□□□ -0.8
ERBB2-220ENST00000584684 DGCR14Q96DF8 476 aaKnown RBP10.04□□□□□ -0.8
ERBB2-220ENST00000584684 FANCD2OSQ96PS1 177 aa10.04□□□□□ -0.8
ERBB2-220ENST00000584684 IGLV11-55A0A075B6I3 123 aa10.03□□□□□ -0.8
ERBB2-220ENST00000584684 OR2J3O76001 311 aa10.03□□□□□ -0.8
ERBB2-220ENST00000584684 S100GP29377 79 aa10.03□□□□□ -0.8
ERBB2-220ENST00000584684 UCP3P55916 312 aa10.03□□□□□ -0.8
ERBB2-220ENST00000584684 ERVK-16P61578 105 aa10.03□□□□□ -0.8
ERBB2-220ENST00000584684 HSD17B13Q7Z5P4 300 aaPredicted RBP10.03□□□□□ -0.8
ERBB2-220ENST00000584684 GPR141Q7Z602 305 aa10.03□□□□□ -0.8
ERBB2-220ENST00000584684 DMBX1Q8NFW5 382 aa10.03□□□□□ -0.8
ERBB2-220ENST00000584684 C15orf40Q8WUR7 153 aa10.03□□□□□ -0.8
ERBB2-220ENST00000584684 BCL7BQ9BQE9 202 aa10.03□□□□□ -0.8
ERBB2-220ENST00000584684 RSRP1Q9BUV0 290 aa10.03□□□□□ -0.8
ERBB2-220ENST00000584684 QTRT1Q9BXR0 403 aaKnown RBP10.03□□□□□ -0.8
ERBB2-220ENST00000584684 COMMD5Q9GZQ3 224 aa10.03□□□□□ -0.8
ERBB2-220ENST00000584684 PEMTQ9UBM1 199 aa10.03□□□□□ -0.8
ERBB2-220ENST00000584684 FBXL7Q9UJT9 491 aa10.03□□□□□ -0.8
ERBB2-220ENST00000584684 DMRT1Q9Y5R6 373 aa10.03□□□□□ -0.8
ERBB2-220ENST00000584684 TRAV3A0A0B4J244 114 aa10.02□□□□□ -0.81
ERBB2-220ENST00000584684 FAM25AB3EWG3 89 aa10.02□□□□□ -0.81
ERBB2-220ENST00000584684 FAM25CB3EWG5 89 aa10.02□□□□□ -0.81
ERBB2-220ENST00000584684 FAM25GB3EWG6 89 aa10.02□□□□□ -0.81
ERBB2-220ENST00000584684 H0Y980 276 aa10.02□□□□□ -0.81
ERBB2-220ENST00000584684 CSN3P07498 182 aa10.02□□□□□ -0.81
ERBB2-220ENST00000584684 TSPAN5P62079 268 aa10.02□□□□□ -0.81
ERBB2-220ENST00000584684 ZNF585BQ52M93 769 aa10.02□□□□□ -0.81
ERBB2-220ENST00000584684 C19orf35Q6ZS72 473 aa10.02□□□□□ -0.81
ERBB2-220ENST00000584684 SLC38A6Q8IZM9 456 aa10.02□□□□□ -0.81
ERBB2-220ENST00000584684 ARRDC1Q8N5I2 433 aa10.02□□□□□ -0.81
ERBB2-220ENST00000584684 OR2K2Q8NGT1 345 aa10.02□□□□□ -0.81
ERBB2-220ENST00000584684 FCAMRQ8WWV6 532 aa10.02□□□□□ -0.81
ERBB2-220ENST00000584684 CCDC140Q96MF4 163 aa10.02□□□□□ -0.81
ERBB2-220ENST00000584684 LGALS9O00182 355 aa10.01□□□□□ -0.81
ERBB2-220ENST00000584684 GGCTO75223 188 aaKnown RBP10.01□□□□□ -0.81
ERBB2-220ENST00000584684 MYOD1P15172 320 aa10.01□□□□□ -0.81
ERBB2-220ENST00000584684 PTBP1P26599 531 aaKnown RBP eCLIP10.01□□□□□ -0.81
ERBB2-220ENST00000584684 MECP2P51608 486 aaKnown RBP10.01□□□□□ -0.81
ERBB2-220ENST00000584684 LCN12Q6JVE5 192 aa10.01□□□□□ -0.81
ERBB2-220ENST00000584684 RAB2BQ8WUD1 216 aa10.01□□□□□ -0.81
ERBB2-220ENST00000584684 CXorf58Q96LI9 332 aa10.01□□□□□ -0.81
ERBB2-220ENST00000584684 EXTL2Q9UBQ6 330 aa10.01□□□□□ -0.81
ERBB2-220ENST00000584684 MTFP1Q9UDX5 166 aa10.01□□□□□ -0.81
ERBB2-220ENST00000584684 TRBV7-1A0A0A6YYK4 115 aa10□□□□□ -0.81
ERBB2-220ENST00000584684 A8MWP6 167 aa10□□□□□ -0.81
ERBB2-220ENST00000584684 A8MZ25 164 aa10□□□□□ -0.81
ERBB2-220ENST00000584684 NDUFB8O95169 186 aa10□□□□□ -0.81
ERBB2-220ENST00000584684 DEFA4P12838 97 aa10□□□□□ -0.81
ERBB2-220ENST00000584684 LPAR6P43657 344 aa10□□□□□ -0.81
ERBB2-220ENST00000584684 RND3P61587 244 aa10□□□□□ -0.81
ERBB2-220ENST00000584684 MRPS10P82664 201 aaKnown RBP10□□□□□ -0.81
ERBB2-220ENST00000584684 RNASE10Q5GAN6 216 aaKnown RBP10□□□□□ -0.81
ERBB2-220ENST00000584684 HAPLN4Q86UW8 402 aa10□□□□□ -0.81
ERBB2-220ENST00000584684 LHFPL1Q86WI0 220 aa10□□□□□ -0.81
ERBB2-220ENST00000584684 Q8N1Y9 231 aa10□□□□□ -0.81
ERBB2-220ENST00000584684 Q8N402 240 aa10□□□□□ -0.81
ERBB2-220ENST00000584684 GDPD1Q8N9F7 314 aa10□□□□□ -0.81
ERBB2-220ENST00000584684 OR1L8Q8NGR8 309 aa10□□□□□ -0.81
ERBB2-220ENST00000584684 OR5B3Q8NH48 314 aa10□□□□□ -0.81
ERBB2-220ENST00000584684 OR52I2Q8NH67 350 aa10□□□□□ -0.81
ERBB2-220ENST00000584684 EEF1AKMT3Q96AZ1 226 aa10□□□□□ -0.81
ERBB2-220ENST00000584684 ZNF486Q96H40 463 aaPredicted RBP10□□□□□ -0.81
ERBB2-220ENST00000584684 WWC2-AS2Q96NR7 200 aa10□□□□□ -0.81
ERBB2-220ENST00000584684 ABHD1Q96SE0 405 aa10□□□□□ -0.81
ERBB2-220ENST00000584684 TSC22D3Q99576 134 aa10□□□□□ -0.81
ERBB2-220ENST00000584684 THAP7Q9BT49 309 aaPredicted RBP10□□□□□ -0.81
ERBB2-220ENST00000584684 MIXL1Q9H2W2 232 aa10□□□□□ -0.81
ERBB2-220ENST00000584684 NDUFA4L2Q9NRX3 87 aa10□□□□□ -0.81
ERBB2-220ENST00000584684 TMEM14BQ9NUH8 114 aa10□□□□□ -0.81
ERBB2-220ENST00000584684 CCDC59Q9P031 241 aaKnown RBP10□□□□□ -0.81
ERBB2-220ENST00000584684 KLK11Q9UBX7 282 aa10□□□□□ -0.81
ERBB2-220ENST00000584684 PRNDQ9UKY0 176 aa10□□□□□ -0.81
ERBB2-220ENST00000584684 U3KQK5 164 aa10□□□□□ -0.81
ERBB2-220ENST00000584684 PPP5D1E7EU14 171 aa9.99□□□□□ -0.81
ERBB2-220ENST00000584684 M0QYG6 137 aa9.99□□□□□ -0.81
ERBB2-220ENST00000584684 CYB5BO43169 146 aa9.99□□□□□ -0.81
ERBB2-220ENST00000584684 KRASP01116 189 aa9.99□□□□□ -0.81
ERBB2-220ENST00000584684 CD74P04233 296 aa9.99□□□□□ -0.81
ERBB2-220ENST00000584684 REG1AP05451 166 aa9.99□□□□□ -0.81
ERBB2-220ENST00000584684 TRAPPC2P0DI81 140 aa9.99□□□□□ -0.81
ERBB2-220ENST00000584684 TRAPPC2BP0DI82 140 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms