RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 TEX45Q8NA69 505 aa7.78□□□□□ -1.16
GGA3-219ENST00000584550 LFNGQ8NES3 379 aa7.78□□□□□ -1.16
GGA3-219ENST00000584550 OR4D10Q8NGI6 311 aa7.78□□□□□ -1.16
GGA3-219ENST00000584550 BORCS5Q969J3 196 aa7.78□□□□□ -1.16
GGA3-219ENST00000584550 ELOVL1Q9BW60 279 aa7.78□□□□□ -1.16
GGA3-219ENST00000584550 NXF2Q9GZY0 626 aaKnown RBP7.78□□□□□ -1.16
GGA3-219ENST00000584550 ZNF701M0R085 212 aaPredicted RBP7.77□□□□□ -1.17
GGA3-219ENST00000584550 GPR31O00270 319 aa7.77□□□□□ -1.17
GGA3-219ENST00000584550 APELAP0DMC3 54 aa7.77□□□□□ -1.17
GGA3-219ENST00000584550 PPP5CP53041 499 aa7.77□□□□□ -1.17
GGA3-219ENST00000584550 MRPS10P82664 201 aaKnown RBP7.77□□□□□ -1.17
GGA3-219ENST00000584550 PMS2P11Q13670 270 aa7.77□□□□□ -1.17
GGA3-219ENST00000584550 PRSS8Q16651 343 aa7.77□□□□□ -1.17
GGA3-219ENST00000584550 SCGB2B2Q4G0G5 96 aa7.77□□□□□ -1.17
GGA3-219ENST00000584550 PYDC2Q56P42 97 aa7.77□□□□□ -1.17
GGA3-219ENST00000584550 FAAP20Q6NZ36 180 aa7.77□□□□□ -1.17
GGA3-219ENST00000584550 STEAP1BQ6NZ63 245 aa7.77□□□□□ -1.17
GGA3-219ENST00000584550 CMTM1Q8IZ96 169 aa7.77□□□□□ -1.17
GGA3-219ENST00000584550 POC5Q8NA72 575 aa7.77□□□□□ -1.17
GGA3-219ENST00000584550 TMEM229BQ8NBD8 167 aa7.77□□□□□ -1.17
GGA3-219ENST00000584550 OR5T1Q8NG75 326 aa7.77□□□□□ -1.17
GGA3-219ENST00000584550 GATAD1Q8WUU5 269 aa7.77□□□□□ -1.17
GGA3-219ENST00000584550 SMIM4Q8WVI0 70 aa7.77□□□□□ -1.17
GGA3-219ENST00000584550 DGCR14Q96DF8 476 aaKnown RBP7.77□□□□□ -1.17
GGA3-219ENST00000584550 MS4A10Q96PG2 267 aa7.77□□□□□ -1.17
GGA3-219ENST00000584550 PHB2Q99623 299 aa7.77□□□□□ -1.17
GGA3-219ENST00000584550 ZNF355PQ9NSJ1 428 aa7.77□□□□□ -1.17
GGA3-219ENST00000584550 FOXA2Q9Y261 457 aaPredicted RBP7.77□□□□□ -1.17
GGA3-219ENST00000584550 NUBP2Q9Y5Y2 271 aa7.77□□□□□ -1.17
GGA3-219ENST00000584550 MSGN1A6NI15 193 aa7.76□□□□□ -1.17
GGA3-219ENST00000584550 CTDSPLO15194 276 aa7.76□□□□□ -1.17
GGA3-219ENST00000584550 SOX15O60248 233 aa7.76□□□□□ -1.17
GGA3-219ENST00000584550 DEDDO75618 318 aa7.76□□□□□ -1.17
GGA3-219ENST00000584550 ACTL6BO94805 426 aa7.76□□□□□ -1.17
GGA3-219ENST00000584550 OR2A4O95047 310 aa7.76□□□□□ -1.17
GGA3-219ENST00000584550 HRASP01112 189 aa7.76□□□□□ -1.17
GGA3-219ENST00000584550 HSPB1P04792 205 aaKnown RBP7.76□□□□□ -1.17
GGA3-219ENST00000584550 LGALS1P09382 135 aaKnown RBP7.76□□□□□ -1.17
GGA3-219ENST00000584550 PI3P19957 117 aa7.76□□□□□ -1.17
GGA3-219ENST00000584550 TBPP20226 339 aa7.76□□□□□ -1.17
GGA3-219ENST00000584550 S100GP29377 79 aa7.76□□□□□ -1.17
GGA3-219ENST00000584550 LPAR6P43657 344 aa7.76□□□□□ -1.17
GGA3-219ENST00000584550 LPCAT3Q6P1A2 487 aa7.76□□□□□ -1.17
GGA3-219ENST00000584550 GTSCR1Q86UQ5 136 aa7.76□□□□□ -1.17
GGA3-219ENST00000584550 RHOVQ96L33 236 aa7.76□□□□□ -1.17
GGA3-219ENST00000584550 OR2A7Q96R45 310 aa7.76□□□□□ -1.17
GGA3-219ENST00000584550 ZNF430Q9H8G1 570 aaPredicted RBP7.76□□□□□ -1.17
GGA3-219ENST00000584550 PLEKHA3Q9HB20 300 aa7.76□□□□□ -1.17
GGA3-219ENST00000584550 HRASLSQ9HDD0 168 aa7.76□□□□□ -1.17
GGA3-219ENST00000584550 RABL2AQ9UBK7 228 aaPredicted RBP7.76□□□□□ -1.17
GGA3-219ENST00000584550 ZNF580Q9UK33 172 aa7.76□□□□□ -1.17
GGA3-219ENST00000584550 RABL2BQ9UNT1 228 aa7.76□□□□□ -1.17
GGA3-219ENST00000584550 CXorf65A6NEN9 183 aa7.75□□□□□ -1.17
GGA3-219ENST00000584550 DISC1C4P0D8 188 aa7.75□□□□□ -1.17
GGA3-219ENST00000584550 MPPED1O15442 326 aa7.75□□□□□ -1.17
GGA3-219ENST00000584550 GSTZ1O43708 216 aaPredicted RBP7.75□□□□□ -1.17
GGA3-219ENST00000584550 S1PR2O95136 353 aa7.75□□□□□ -1.17
GGA3-219ENST00000584550 CD74P04233 296 aa7.75□□□□□ -1.17
GGA3-219ENST00000584550 AKAIN1P0CW23 69 aa7.75□□□□□ -1.17
GGA3-219ENST00000584550 CD40LGP29965 261 aa7.75□□□□□ -1.17
GGA3-219ENST00000584550 SSBP2P81877 361 aaPredicted RBP7.75□□□□□ -1.17
GGA3-219ENST00000584550 SSBP1Q04837 148 aaKnown RBP7.75□□□□□ -1.17
GGA3-219ENST00000584550 MRGPRG-AS1Q2M3A8 158 aa7.75□□□□□ -1.17
GGA3-219ENST00000584550 C10orf55Q5SWW7 151 aa7.75□□□□□ -1.17
GGA3-219ENST00000584550 TBC1D26Q86UD7 250 aa7.75□□□□□ -1.17
GGA3-219ENST00000584550 MMD2Q8IY49 270 aa7.75□□□□□ -1.17
GGA3-219ENST00000584550 SLC38A6Q8IZM9 456 aa7.75□□□□□ -1.17
GGA3-219ENST00000584550 ARRDC1Q8N5I2 433 aa7.75□□□□□ -1.17
GGA3-219ENST00000584550 MINDY2Q8NBR6 621 aa7.75□□□□□ -1.17
GGA3-219ENST00000584550 DMBX1Q8NFW5 382 aa7.75□□□□□ -1.17
GGA3-219ENST00000584550 CD300LFQ8TDQ1 290 aa7.75□□□□□ -1.17
GGA3-219ENST00000584550 SOSTQ9BQB4 213 aa7.75□□□□□ -1.17
GGA3-219ENST00000584550 THAP7Q9BT49 309 aaPredicted RBP7.75□□□□□ -1.17
GGA3-219ENST00000584550 NDUFA13Q9P0J0 144 aa7.75□□□□□ -1.17
GGA3-219ENST00000584550 RBFOX2O43251 390 aaKnown RBP eCLIP7.74□□□□□ -1.17
GGA3-219ENST00000584550 CREBL2O60519 120 aaPredicted RBP7.74□□□□□ -1.17
GGA3-219ENST00000584550 KBTBD11O94819 623 aa7.74□□□□□ -1.17
GGA3-219ENST00000584550 HPRT1P00492 218 aa7.74□□□□□ -1.17
GGA3-219ENST00000584550 MYOD1P15172 320 aa7.74□□□□□ -1.17
GGA3-219ENST00000584550 NQO2P16083 231 aa7.74□□□□□ -1.17
GGA3-219ENST00000584550 F2RP25116 425 aa7.74□□□□□ -1.17
GGA3-219ENST00000584550 CRIP2P52943 208 aaPredicted RBP7.74□□□□□ -1.17
GGA3-219ENST00000584550 UCP3P55916 312 aa7.74□□□□□ -1.17
GGA3-219ENST00000584550 TPPP2P59282 170 aa7.74□□□□□ -1.17
GGA3-219ENST00000584550 ERVK-16P61578 105 aa7.74□□□□□ -1.17
GGA3-219ENST00000584550 MEF2DQ14814 521 aa7.74□□□□□ -1.17
GGA3-219ENST00000584550 AKIRIN2Q53H80 203 aa7.74□□□□□ -1.17
GGA3-219ENST00000584550 C19orf54Q5BKX5 351 aa7.74□□□□□ -1.17
GGA3-219ENST00000584550 OR4A47Q6IF82 309 aa7.74□□□□□ -1.17
GGA3-219ENST00000584550 PUSL1Q8N0Z8 303 aaKnown RBP7.74□□□□□ -1.17
GGA3-219ENST00000584550 Q8N402 240 aa7.74□□□□□ -1.17
GGA3-219ENST00000584550 TCTEX1D1Q8N7M0 179 aa7.74□□□□□ -1.17
GGA3-219ENST00000584550 OR4C16Q8NGL9 310 aa7.74□□□□□ -1.17
GGA3-219ENST00000584550 TERB2Q8NHR7 220 aa7.74□□□□□ -1.17
GGA3-219ENST00000584550 VSTM2AQ8TAG5 236 aa7.74□□□□□ -1.17
GGA3-219ENST00000584550 TMEM167AQ8TBQ9 72 aa7.74□□□□□ -1.17
GGA3-219ENST00000584550 MARCH1Q8TCQ1 289 aa7.74□□□□□ -1.17
GGA3-219ENST00000584550 SRSF12Q8WXF0 261 aaKnown RBP7.74□□□□□ -1.17
GGA3-219ENST00000584550 FYTTD1Q96QD9 318 aaKnown RBP7.74□□□□□ -1.17
GGA3-219ENST00000584550 AIFM2Q9BRQ8 373 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms