RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 SLC35E3Q7Z769 313 aa14.51□□□□□ -0.09
RFFL-211ENST00000584541 OR1S1Q8NH92 325 aa14.51□□□□□ -0.09
RFFL-211ENST00000584541 ABHD5Q8WTS1 349 aa14.51□□□□□ -0.09
RFFL-211ENST00000584541 COA4Q9NYJ1 87 aa14.51□□□□□ -0.09
RFFL-211ENST00000584541 FOXA2Q9Y261 457 aaPredicted RBP14.51□□□□□ -0.09
RFFL-211ENST00000584541 OR51B2Q9Y5P1 312 aa14.51□□□□□ -0.09
RFFL-211ENST00000584541 TET2Q6N021 2002 aaPredicted RBP14.5□□□□□ -0.09
RFFL-211ENST00000584541 IGHV7-81A0A0B4J1V7 117 aa14.5□□□□□ -0.09
RFFL-211ENST00000584541 CCSO14618 274 aa14.5□□□□□ -0.09
RFFL-211ENST00000584541 GOSR2O14653 212 aa14.5□□□□□ -0.09
RFFL-211ENST00000584541 IGHG2P01859 326 aa14.5□□□□□ -0.09
RFFL-211ENST00000584541 RPL27AP46776 148 aaKnown RBP14.5□□□□□ -0.09
RFFL-211ENST00000584541 COMPP49747 757 aaPredicted RBP14.5□□□□□ -0.09
RFFL-211ENST00000584541 MRGPRG-AS1Q2M3A8 158 aa14.5□□□□□ -0.09
RFFL-211ENST00000584541 Q6ZRM9 215 aa14.5□□□□□ -0.09
RFFL-211ENST00000584541 ZNF429Q86V71 674 aa14.5□□□□□ -0.09
RFFL-211ENST00000584541 OR1L8Q8NGR8 309 aa14.5□□□□□ -0.09
RFFL-211ENST00000584541 OR5B3Q8NH48 314 aa14.5□□□□□ -0.09
RFFL-211ENST00000584541 ARPC1AQ92747 370 aa14.5□□□□□ -0.09
RFFL-211ENST00000584541 HSPB9Q9BQS6 159 aa14.5□□□□□ -0.09
RFFL-211ENST00000584541 TMEM14BQ9NUH8 114 aa14.5□□□□□ -0.09
RFFL-211ENST00000584541 ZNF257Q9Y2Q1 563 aa14.5□□□□□ -0.09
RFFL-211ENST00000584541 IAH1Q2TAA2 248 aaPredicted RBP14.49□□□□□ -0.09
RFFL-211ENST00000584541 OR5M8Q8NGP6 311 aa14.49□□□□□ -0.09
RFFL-211ENST00000584541 OR2T6Q8NHC8 308 aa14.49□□□□□ -0.09
RFFL-211ENST00000584541 GRPEL2Q8TAA5 225 aa14.49□□□□□ -0.09
RFFL-211ENST00000584541 SRSF12Q8WXF0 261 aaKnown RBP14.49□□□□□ -0.09
RFFL-211ENST00000584541 QTRT1Q9BXR0 403 aaKnown RBP14.49□□□□□ -0.09
RFFL-211ENST00000584541 ZNF702PQ9H963 129 aa14.49□□□□□ -0.09
RFFL-211ENST00000584541 PARP11Q9NR21 331 aa14.49□□□□□ -0.09
RFFL-211ENST00000584541 MGAT4CQ9UBM8 478 aa14.49□□□□□ -0.09
RFFL-211ENST00000584541 TEX50A0A1B0GTY4 177 aa14.48□□□□□ -0.09
RFFL-211ENST00000584541 MPTX1A8MV57 137 aa14.48□□□□□ -0.09
RFFL-211ENST00000584541 ST8SIA3O43173 380 aa14.48□□□□□ -0.09
RFFL-211ENST00000584541 IFNA17P01571 189 aa14.48□□□□□ -0.09
RFFL-211ENST00000584541 OPN1MWP04001 364 aa14.48□□□□□ -0.09
RFFL-211ENST00000584541 OPN1MW2P0DN77 364 aa14.48□□□□□ -0.09
RFFL-211ENST00000584541 OPN1MW3P0DN78 364 aa14.48□□□□□ -0.09
RFFL-211ENST00000584541 HSPE1P61604 102 aaKnown RBP14.48□□□□□ -0.09
RFFL-211ENST00000584541 RRAS2P62070 204 aaPredicted RBP14.48□□□□□ -0.09
RFFL-211ENST00000584541 C2orf50Q96LR7 162 aa14.48□□□□□ -0.09
RFFL-211ENST00000584541 FYTTD1Q96QD9 318 aaKnown RBP14.48□□□□□ -0.09
RFFL-211ENST00000584541 HINT2Q9BX68 163 aa14.48□□□□□ -0.09
RFFL-211ENST00000584541 PLXNB1O43157 2135 aa14.48□□□□□ -0.09
RFFL-211ENST00000584541 TNCP24821 2201 aa14.47□□□□□ -0.09
RFFL-211ENST00000584541 AP4M1O00189 453 aa14.47□□□□□ -0.09
RFFL-211ENST00000584541 TSPAN9O75954 239 aa14.47□□□□□ -0.09
RFFL-211ENST00000584541 TRAPPC2P0DI81 140 aa14.47□□□□□ -0.09
RFFL-211ENST00000584541 TRAPPC2BP0DI82 140 aa14.47□□□□□ -0.09
RFFL-211ENST00000584541 VDAC2P45880 294 aaPredicted RBP14.47□□□□□ -0.09
RFFL-211ENST00000584541 TMEM267Q0VDI3 215 aaPredicted RBP14.47□□□□□ -0.09
RFFL-211ENST00000584541 C2orf68Q2NKX9 166 aa14.47□□□□□ -0.09
RFFL-211ENST00000584541 Q6ZS46 218 aa14.47□□□□□ -0.09
RFFL-211ENST00000584541 Q6ZSV7 163 aa14.47□□□□□ -0.09
RFFL-211ENST00000584541 MRPL41Q8IXM3 137 aaKnown RBP14.47□□□□□ -0.09
RFFL-211ENST00000584541 Q8N2B8 174 aa14.47□□□□□ -0.09
RFFL-211ENST00000584541 OR52E5Q8NH55 327 aa14.47□□□□□ -0.09
RFFL-211ENST00000584541 OR10C1Q96KK4 312 aa14.47□□□□□ -0.09
RFFL-211ENST00000584541 GSKIPQ9P0R6 139 aa14.47□□□□□ -0.09
RFFL-211ENST00000584541 NF1P21359 2839 aa14.47□□□□□ -0.09
RFFL-211ENST00000584541 MSGN1A6NI15 193 aa14.46□□□□□ -0.09
RFFL-211ENST00000584541 FAM90A26D6RGX4 464 aa14.46□□□□□ -0.09
RFFL-211ENST00000584541 ATP6V0E1O15342 81 aa14.46□□□□□ -0.09
RFFL-211ENST00000584541 PITX3O75364 302 aa14.46□□□□□ -0.09
RFFL-211ENST00000584541 NDUFA7O95182 113 aa14.46□□□□□ -0.09
RFFL-211ENST00000584541 MYOD1P15172 320 aa14.46□□□□□ -0.09
RFFL-211ENST00000584541 SPCS3P61009 180 aa14.46□□□□□ -0.09
RFFL-211ENST00000584541 SSBP2P81877 361 aaPredicted RBP14.46□□□□□ -0.09
RFFL-211ENST00000584541 CYCSP99999 105 aaKnown RBP14.46□□□□□ -0.09
RFFL-211ENST00000584541 SRSF2Q01130 221 aaKnown RBP14.46□□□□□ -0.09
RFFL-211ENST00000584541 AARDQ4LEZ3 155 aa14.46□□□□□ -0.09
RFFL-211ENST00000584541 C10orf55Q5SWW7 151 aa14.46□□□□□ -0.09
RFFL-211ENST00000584541 ZBTB8BQ8NAP8 495 aaPredicted RBP14.46□□□□□ -0.09
RFFL-211ENST00000584541 SGMS2Q8NHU3 365 aa14.46□□□□□ -0.09
RFFL-211ENST00000584541 ENY2Q9NPA8 101 aa14.46□□□□□ -0.09
RFFL-211ENST00000584541 A0A1W2PN81 502 aa14.45□□□□□ -0.1
RFFL-211ENST00000584541 LINC01548A6NM66 108 aa14.45□□□□□ -0.1
RFFL-211ENST00000584541 MED6O75586 246 aa14.45□□□□□ -0.1
RFFL-211ENST00000584541 NXPH3O95157 252 aa14.45□□□□□ -0.1
RFFL-211ENST00000584541 SIX6O95475 246 aa14.45□□□□□ -0.1
RFFL-211ENST00000584541 IGF1P05019 195 aa14.45□□□□□ -0.1
RFFL-211ENST00000584541 CHRNA7P36544 502 aa14.45□□□□□ -0.1
RFFL-211ENST00000584541 NDPQ00604 133 aa14.45□□□□□ -0.1
RFFL-211ENST00000584541 PRCDQ00LT1 54 aa14.45□□□□□ -0.1
RFFL-211ENST00000584541 FCN2Q15485 313 aa14.45□□□□□ -0.1
RFFL-211ENST00000584541 HSD17B13Q7Z5P4 300 aaPredicted RBP14.45□□□□□ -0.1
RFFL-211ENST00000584541 OR4F5Q8NH21 305 aa14.45□□□□□ -0.1
RFFL-211ENST00000584541 TMEM68Q96MH6 324 aa14.45□□□□□ -0.1
RFFL-211ENST00000584541 SRSF8Q9BRL6 282 aaKnown RBP14.45□□□□□ -0.1
RFFL-211ENST00000584541 FAM103A1Q9BTL3 118 aaKnown RBP14.45□□□□□ -0.1
RFFL-211ENST00000584541 GON7Q9BXV9 100 aa14.45□□□□□ -0.1
RFFL-211ENST00000584541 C16orf95Q9H693 158 aa14.45□□□□□ -0.1
RFFL-211ENST00000584541 PLEKHA3Q9HB20 300 aa14.45□□□□□ -0.1
RFFL-211ENST00000584541 NDUFA4L2Q9NRX3 87 aa14.45□□□□□ -0.1
RFFL-211ENST00000584541 CEBPZOSA8MTT3 80 aa14.44□□□□□ -0.1
RFFL-211ENST00000584541 WRBO00258 174 aa14.44□□□□□ -0.1
RFFL-211ENST00000584541 SCGB1D2O95969 90 aa14.44□□□□□ -0.1
RFFL-211ENST00000584541 NKX2-1P43699 371 aaPredicted RBP14.44□□□□□ -0.1
RFFL-211ENST00000584541 HOXA1P49639 335 aaPredicted RBP14.44□□□□□ -0.1
RFFL-211ENST00000584541 TNFRSF9Q07011 255 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms