RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 OR2B8PP59922 312 aa16.34■□□□□ 0.21
PPP4R1-228ENST00000584074 DMBX1Q8NFW5 382 aa16.34■□□□□ 0.21
PPP4R1-228ENST00000584074 WWC2-AS2Q96NR7 200 aa16.34■□□□□ 0.21
PPP4R1-228ENST00000584074 SCPEP1Q9HB40 452 aa16.34■□□□□ 0.21
PPP4R1-228ENST00000584074 TMEM140Q9NV12 185 aa16.34■□□□□ 0.21
PPP4R1-228ENST00000584074 PPP5D1E7EU14 171 aa16.33■□□□□ 0.2
PPP4R1-228ENST00000584074 CTRB1P17538 263 aa16.33■□□□□ 0.2
PPP4R1-228ENST00000584074 GPR107Q5VW38 600 aa16.33■□□□□ 0.2
PPP4R1-228ENST00000584074 CTRB2Q6GPI1 263 aa16.33■□□□□ 0.2
PPP4R1-228ENST00000584074 SBSPONQ8IVN8 264 aa16.33■□□□□ 0.2
PPP4R1-228ENST00000584074 COMMD9Q9P000 198 aa16.33■□□□□ 0.2
PPP4R1-228ENST00000584074 DMRT1Q9Y5R6 373 aa16.33■□□□□ 0.2
PPP4R1-228ENST00000584074 S4R3C0 116 aa16.33■□□□□ 0.2
PPP4R1-228ENST00000584074 SORL1Q92673 2214 aa16.33■□□□□ 0.2
PPP4R1-228ENST00000584074 IGHV3-23P01764 117 aa16.32■□□□□ 0.2
PPP4R1-228ENST00000584074 FRMD6-AS1P0C7T7 363 aa16.32■□□□□ 0.2
PPP4R1-228ENST00000584074 F2RP25116 425 aa16.32■□□□□ 0.2
PPP4R1-228ENST00000584074 CMTM1Q8IZ96 169 aa16.32■□□□□ 0.2
PPP4R1-228ENST00000584074 Q8N1Y9 231 aa16.32■□□□□ 0.2
PPP4R1-228ENST00000584074 DGCR14Q96DF8 476 aaKnown RBP16.32■□□□□ 0.2
PPP4R1-228ENST00000584074 COMMD5Q9GZQ3 224 aa16.32■□□□□ 0.2
PPP4R1-228ENST00000584074 IGLC7A0M8Q6 106 aa16.31■□□□□ 0.2
PPP4R1-228ENST00000584074 FAM25AB3EWG3 89 aa16.31■□□□□ 0.2
PPP4R1-228ENST00000584074 FAM25CB3EWG5 89 aa16.31■□□□□ 0.2
PPP4R1-228ENST00000584074 FAM25GB3EWG6 89 aa16.31■□□□□ 0.2
PPP4R1-228ENST00000584074 GPR31O00270 319 aa16.31■□□□□ 0.2
PPP4R1-228ENST00000584074 DHFRP00374 187 aa16.31■□□□□ 0.2
PPP4R1-228ENST00000584074 HLA-AP01891 365 aaKnown RBP16.31■□□□□ 0.2
PPP4R1-228ENST00000584074 DEFA4P12838 97 aa16.31■□□□□ 0.2
PPP4R1-228ENST00000584074 RCVRNP35243 200 aa16.31■□□□□ 0.2
PPP4R1-228ENST00000584074 LPAR6P43657 344 aa16.31■□□□□ 0.2
PPP4R1-228ENST00000584074 TSPAN5P62079 268 aa16.31■□□□□ 0.2
PPP4R1-228ENST00000584074 PHLDA2Q53GA4 152 aa16.31■□□□□ 0.2
PPP4R1-228ENST00000584074 MZT2AQ6P582 158 aa16.31■□□□□ 0.2
PPP4R1-228ENST00000584074 FCAMRQ8WWV6 532 aa16.31■□□□□ 0.2
PPP4R1-228ENST00000584074 SIGLEC8Q9NYZ4 499 aa16.31■□□□□ 0.2
PPP4R1-228ENST00000584074 PEMTQ9UBM1 199 aa16.31■□□□□ 0.2
PPP4R1-228ENST00000584074 HUWE1Q7Z6Z7 4374 aaKnown RBP16.31■□□□□ 0.2
PPP4R1-228ENST00000584074 MARCH11A6NNE9 402 aa16.3■□□□□ 0.2
PPP4R1-228ENST00000584074 KLK9Q2XQG4 91 aa16.3■□□□□ 0.2
PPP4R1-228ENST00000584074 ZNF585BQ52M93 769 aa16.3■□□□□ 0.2
PPP4R1-228ENST00000584074 ADAMTSL5Q6ZMM2 481 aa16.3■□□□□ 0.2
PPP4R1-228ENST00000584074 OR10W1Q8NGF6 305 aa16.3■□□□□ 0.2
PPP4R1-228ENST00000584074 CCDC140Q96MF4 163 aa16.3■□□□□ 0.2
PPP4R1-228ENST00000584074 KLK9Q9UKQ9 250 aa16.3■□□□□ 0.2
PPP4R1-228ENST00000584074 IGLV11-55A0A075B6I3 123 aa16.29■□□□□ 0.2
PPP4R1-228ENST00000584074 IZUMO1RA6ND01 250 aa16.29■□□□□ 0.2
PPP4R1-228ENST00000584074 H0Y980 276 aa16.29■□□□□ 0.2
PPP4R1-228ENST00000584074 GGCTO75223 188 aaKnown RBP16.29■□□□□ 0.2
PPP4R1-228ENST00000584074 OR2C1O95371 312 aa16.29■□□□□ 0.2
PPP4R1-228ENST00000584074 KRASP01116 189 aa16.29■□□□□ 0.2
PPP4R1-228ENST00000584074 ZNF182P17025 639 aaPredicted RBP16.29■□□□□ 0.2
PPP4R1-228ENST00000584074 ERVK-16P61578 105 aa16.29■□□□□ 0.2
PPP4R1-228ENST00000584074 RNASE12Q5GAN4 147 aaKnown RBP16.29■□□□□ 0.2
PPP4R1-228ENST00000584074 FAM209BQ5JX69 171 aa16.29■□□□□ 0.2
PPP4R1-228ENST00000584074 CLEC19AQ6UXS0 136 aa16.29■□□□□ 0.2
PPP4R1-228ENST00000584074 AP3S1Q92572 193 aa16.29■□□□□ 0.2
PPP4R1-228ENST00000584074 QTRT1Q9BXR0 403 aaKnown RBP16.29■□□□□ 0.2
PPP4R1-228ENST00000584074 MRPS26Q9BYN8 205 aaKnown RBP16.29■□□□□ 0.2
PPP4R1-228ENST00000584074 TEX50A0A1B0GTY4 177 aa16.28■□□□□ 0.2
PPP4R1-228ENST00000584074 M0QYG6 137 aa16.28■□□□□ 0.2
PPP4R1-228ENST00000584074 FGF2P09038 288 aa16.28■□□□□ 0.2
PPP4R1-228ENST00000584074 IGHV4-30-4P0DP06 118 aa16.28■□□□□ 0.2
PPP4R1-228ENST00000584074 HIST1H1BP16401 226 aaKnown RBP16.28■□□□□ 0.2
PPP4R1-228ENST00000584074 G6PCP35575 357 aa16.28■□□□□ 0.2
PPP4R1-228ENST00000584074 MECP2P51608 486 aaKnown RBP16.28■□□□□ 0.2
PPP4R1-228ENST00000584074 MFSD2BA6NFX1 497 aa16.27■□□□□ 0.2
PPP4R1-228ENST00000584074 EDN2P20800 178 aa16.27■□□□□ 0.2
PPP4R1-228ENST00000584074 ARL3P36405 182 aa16.27■□□□□ 0.2
PPP4R1-228ENST00000584074 ALDH3B2P48448 385 aa16.27■□□□□ 0.2
PPP4R1-228ENST00000584074 LCN12Q6JVE5 192 aa16.27■□□□□ 0.2
PPP4R1-228ENST00000584074 LPCAT3Q6P1A2 487 aa16.27■□□□□ 0.2
PPP4R1-228ENST00000584074 Q8N402 240 aa16.27■□□□□ 0.2
PPP4R1-228ENST00000584074 EEF1AKMT3Q96AZ1 226 aa16.27■□□□□ 0.2
PPP4R1-228ENST00000584074 SRSF8Q9BRL6 282 aaKnown RBP16.27■□□□□ 0.2
PPP4R1-228ENST00000584074 EXTL2Q9UBQ6 330 aa16.27■□□□□ 0.2
PPP4R1-228ENST00000584074 KLK11Q9UBX7 282 aa16.27■□□□□ 0.2
PPP4R1-228ENST00000584074 NSG2Q9Y328 171 aa16.27■□□□□ 0.2
PPP4R1-228ENST00000584074 KMT2CQ8NEZ4 4911 aaKnown RBP16.27■□□□□ 0.19
PPP4R1-228ENST00000584074 STAB2Q8WWQ8 2551 aa16.26■□□□□ 0.19
PPP4R1-228ENST00000584074 TRAPPC2P0DI81 140 aa16.26■□□□□ 0.19
PPP4R1-228ENST00000584074 TRAPPC2BP0DI82 140 aa16.26■□□□□ 0.19
PPP4R1-228ENST00000584074 GPR141Q7Z602 305 aa16.26■□□□□ 0.19
PPP4R1-228ENST00000584074 TBC1D26Q86UD7 250 aa16.26■□□□□ 0.19
PPP4R1-228ENST00000584074 OR1L8Q8NGR8 309 aa16.26■□□□□ 0.19
PPP4R1-228ENST00000584074 OR52I2Q8NH67 350 aa16.26■□□□□ 0.19
PPP4R1-228ENST00000584074 THAP7Q9BT49 309 aaPredicted RBP16.26■□□□□ 0.19
PPP4R1-228ENST00000584074 OR13C7P0DN81 318 aa16.25■□□□□ 0.19
PPP4R1-228ENST00000584074 WT1-ASQ06250 92 aa16.25■□□□□ 0.19
PPP4R1-228ENST00000584074 GPHB5Q86YW7 130 aa16.25■□□□□ 0.19
PPP4R1-228ENST00000584074 SGPP2Q8IWX5 399 aa16.25■□□□□ 0.19
PPP4R1-228ENST00000584074 ABHD1Q96SE0 405 aa16.25■□□□□ 0.19
PPP4R1-228ENST00000584074 HINT2Q9BX68 163 aa16.25■□□□□ 0.19
PPP4R1-228ENST00000584074 C19orf73Q9NVV2 129 aa16.25■□□□□ 0.19
PPP4R1-228ENST00000584074 OR51B2Q9Y5P1 312 aa16.25■□□□□ 0.19
PPP4R1-228ENST00000584074 NBEAL2Q6ZNJ1 2754 aa16.25■□□□□ 0.19
PPP4R1-228ENST00000584074 TRBV7-1A0A0A6YYK4 115 aa16.24■□□□□ 0.19
PPP4R1-228ENST00000584074 C2orf70A6NJV1 201 aa16.24■□□□□ 0.19
PPP4R1-228ENST00000584074 LGALS9O00182 355 aa16.24■□□□□ 0.19
PPP4R1-228ENST00000584074 SNAPC5O75971 98 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms