RNA–Protein interactions for RNA: ENST00000583821.1

MSI2-218, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-218	ENST00000583821	MLLT11	Q13015	90 aa	Predicted RBP	6.11	□□□□□ -1.43
MSI2-218	ENST00000583821	RTL8B	Q17RB0	113 aa		6.11	□□□□□ -1.43
MSI2-218	ENST00000583821	LCN12	Q6JVE5	192 aa		6.11	□□□□□ -1.43
MSI2-218	ENST00000583821	GTSCR1	Q86UQ5	136 aa		6.11	□□□□□ -1.43
MSI2-218	ENST00000583821		Q8N402	240 aa		6.11	□□□□□ -1.43
MSI2-218	ENST00000583821	DEFB125	Q8N687	156 aa		6.11	□□□□□ -1.43
MSI2-218	ENST00000583821	OR10R2	Q8NGX6	335 aa		6.11	□□□□□ -1.43
MSI2-218	ENST00000583821	GINS4	Q9BRT9	223 aa		6.11	□□□□□ -1.43
MSI2-218	ENST00000583821	CCDC90B	Q9GZT6	254 aa		6.11	□□□□□ -1.43
MSI2-218	ENST00000583821	DUSP21	Q9H596	190 aa		6.11	□□□□□ -1.43
MSI2-218	ENST00000583821	ZNF430	Q9H8G1	570 aa	Predicted RBP	6.11	□□□□□ -1.43
MSI2-218	ENST00000583821	SCN3B	Q9NY72	215 aa		6.11	□□□□□ -1.43
MSI2-218	ENST00000583821		V9GY05	133 aa		6.11	□□□□□ -1.43
MSI2-218	ENST00000583821	RBMY1B	A6NDE4	496 aa	Known RBP	6.1	□□□□□ -1.43
MSI2-218	ENST00000583821	RBMY1E	A6NEQ0	496 aa	Known RBP	6.1	□□□□□ -1.43
MSI2-218	ENST00000583821	HMX3	A6NHT5	357 aa		6.1	□□□□□ -1.43
MSI2-218	ENST00000583821		H0Y980	276 aa		6.1	□□□□□ -1.43
MSI2-218	ENST00000583821		H3BMQ9	156 aa		6.1	□□□□□ -1.43
MSI2-218	ENST00000583821	OR2A4	O95047	310 aa		6.1	□□□□□ -1.43
MSI2-218	ENST00000583821	BRI3	O95415	125 aa		6.1	□□□□□ -1.43
MSI2-218	ENST00000583821	IGHV3-23	P01764	117 aa		6.1	□□□□□ -1.43
MSI2-218	ENST00000583821	CD7	P09564	240 aa		6.1	□□□□□ -1.43
MSI2-218	ENST00000583821	RBMY1D	P0C7P1	496 aa	Known RBP	6.1	□□□□□ -1.43
MSI2-218	ENST00000583821	HIST1H1D	P16402	221 aa	Known RBP	6.1	□□□□□ -1.43
MSI2-218	ENST00000583821	HOXA1	P49639	335 aa	Predicted RBP	6.1	□□□□□ -1.43
MSI2-218	ENST00000583821	MECP2	P51608	486 aa	Known RBP	6.1	□□□□□ -1.43
MSI2-218	ENST00000583821	RPL30	P62888	115 aa	Known RBP	6.1	□□□□□ -1.43
MSI2-218	ENST00000583821	FLI1	Q01543	452 aa	Predicted RBP	6.1	□□□□□ -1.43
MSI2-218	ENST00000583821	SSX1	Q16384	188 aa		6.1	□□□□□ -1.43
MSI2-218	ENST00000583821	VMA21	Q3ZAQ7	101 aa		6.1	□□□□□ -1.43
MSI2-218	ENST00000583821	CD300E	Q496F6	205 aa	Predicted RBP	6.1	□□□□□ -1.43
MSI2-218	ENST00000583821	NR2C2AP	Q86WQ0	139 aa		6.1	□□□□□ -1.43
MSI2-218	ENST00000583821	H1FOO	Q8IZA3	346 aa	Predicted RBP	6.1	□□□□□ -1.43
MSI2-218	ENST00000583821	VKORC1L1	Q8N0U8	176 aa		6.1	□□□□□ -1.43
MSI2-218	ENST00000583821	CACNG8	Q8WXS5	425 aa		6.1	□□□□□ -1.43
MSI2-218	ENST00000583821	GPHA2	Q96T91	129 aa		6.1	□□□□□ -1.43
MSI2-218	ENST00000583821	MGLL	Q99685	303 aa		6.1	□□□□□ -1.43
MSI2-218	ENST00000583821	DCUN1D5	Q9BTE7	237 aa		6.1	□□□□□ -1.43
MSI2-218	ENST00000583821	HIPK2	Q9H2X6	1198 aa		6.1	□□□□□ -1.43
MSI2-218	ENST00000583821	EXTL2	Q9UBQ6	330 aa		6.1	□□□□□ -1.43
MSI2-218	ENST00000583821	RAB22A	Q9UL26	194 aa		6.1	□□□□□ -1.43
MSI2-218	ENST00000583821	PRELID3B	Q9Y3B1	194 aa		6.1	□□□□□ -1.43
MSI2-218	ENST00000583821	TPRKB	Q9Y3C4	175 aa		6.1	□□□□□ -1.43
MSI2-218	ENST00000583821	RBM7	Q9Y580	266 aa	Known RBP	6.1	□□□□□ -1.43
MSI2-218	ENST00000583821		S4R3C0	116 aa		6.1	□□□□□ -1.43
MSI2-218	ENST00000583821	VPS13D	Q5THJ4	4388 aa		6.1	□□□□□ -1.43
MSI2-218	ENST00000583821	HECTD4	Q9Y4D8	3996 aa		6.09	□□□□□ -1.43
MSI2-218	ENST00000583821	TRBV9	A0A0B4J1U6	114 aa		6.09	□□□□□ -1.43
MSI2-218	ENST00000583821	IGKV1D-13	A0A0B4J2D9	117 aa		6.09	□□□□□ -1.43
MSI2-218	ENST00000583821		A0A1B0GW64	132 aa		6.09	□□□□□ -1.43
MSI2-218	ENST00000583821	PCP4L1	A6NKN8	68 aa		6.09	□□□□□ -1.43
MSI2-218	ENST00000583821	ZNF785	A8K8V0	405 aa		6.09	□□□□□ -1.43
MSI2-218	ENST00000583821	TEX22	C9J3V5	150 aa		6.09	□□□□□ -1.43
MSI2-218	ENST00000583821	RAB27B	O00194	218 aa		6.09	□□□□□ -1.43
MSI2-218	ENST00000583821	WRB	O00258	174 aa		6.09	□□□□□ -1.43
MSI2-218	ENST00000583821	FCGR3B	O75015	233 aa		6.09	□□□□□ -1.43
MSI2-218	ENST00000583821	SNAPC5	O75971	98 aa		6.09	□□□□□ -1.43
MSI2-218	ENST00000583821	OR2J3	O76001	311 aa		6.09	□□□□□ -1.43
MSI2-218	ENST00000583821	IFNA6	P05013	189 aa		6.09	□□□□□ -1.43
MSI2-218	ENST00000583821	IGKV1-13	P0DP09	117 aa		6.09	□□□□□ -1.43
MSI2-218	ENST00000583821	MYOD1	P15172	320 aa		6.09	□□□□□ -1.43
MSI2-218	ENST00000583821	NFYA	P23511	347 aa	Predicted RBP	6.09	□□□□□ -1.43
MSI2-218	ENST00000583821	PSMA1	P25786	263 aa	Known RBP	6.09	□□□□□ -1.43
MSI2-218	ENST00000583821	RAB4B	P61018	213 aa		6.09	□□□□□ -1.43
MSI2-218	ENST00000583821	ATP5G2	Q06055	141 aa		6.09	□□□□□ -1.43
MSI2-218	ENST00000583821	ARFRP1	Q13795	201 aa		6.09	□□□□□ -1.43
MSI2-218	ENST00000583821	TRAM1	Q15629	374 aa		6.09	□□□□□ -1.43
MSI2-218	ENST00000583821	LINC00322	Q6ZN03	302 aa	Predicted RBP	6.09	□□□□□ -1.43
MSI2-218	ENST00000583821	KCTD9	Q7L273	389 aa		6.09	□□□□□ -1.43
MSI2-218	ENST00000583821	TEX45	Q8NA69	505 aa		6.09	□□□□□ -1.43
MSI2-218	ENST00000583821	OR5H6	Q8NGV6	325 aa		6.09	□□□□□ -1.43
MSI2-218	ENST00000583821	DYNLRB2	Q8TF09	96 aa		6.09	□□□□□ -1.43
MSI2-218	ENST00000583821	SNAPC3	Q92966	411 aa		6.09	□□□□□ -1.43
MSI2-218	ENST00000583821	USMG5	Q96IX5	58 aa		6.09	□□□□□ -1.43
MSI2-218	ENST00000583821	TMEM68	Q96MH6	324 aa		6.09	□□□□□ -1.43
MSI2-218	ENST00000583821	SRD5A3	Q9H8P0	318 aa		6.09	□□□□□ -1.43
MSI2-218	ENST00000583821	SIGLEC8	Q9NYZ4	499 aa		6.09	□□□□□ -1.43
MSI2-218	ENST00000583821	DMRT1	Q9Y5R6	373 aa		6.09	□□□□□ -1.43
MSI2-218	ENST00000583821	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	6.08	□□□□□ -1.44
MSI2-218	ENST00000583821	C2orf70	A6NJV1	201 aa		6.08	□□□□□ -1.44
MSI2-218	ENST00000583821	FAM223B	A6NKX1	122 aa		6.08	□□□□□ -1.44
MSI2-218	ENST00000583821	IFITM5	A6NNB3	132 aa		6.08	□□□□□ -1.44
MSI2-218	ENST00000583821		E7EUB6	86 aa		6.08	□□□□□ -1.44
MSI2-218	ENST00000583821	TUSC2	O75896	110 aa		6.08	□□□□□ -1.44
MSI2-218	ENST00000583821	IGLV2-14	P01704	120 aa		6.08	□□□□□ -1.44
MSI2-218	ENST00000583821	IL6R	P08887	468 aa	Predicted RBP	6.08	□□□□□ -1.44
MSI2-218	ENST00000583821	RRAS	P10301	218 aa		6.08	□□□□□ -1.44
MSI2-218	ENST00000583821	AREG	P15514	252 aa		6.08	□□□□□ -1.44
MSI2-218	ENST00000583821	CRHBP	P24387	322 aa		6.08	□□□□□ -1.44
MSI2-218	ENST00000583821	GADD45A	P24522	165 aa		6.08	□□□□□ -1.44
MSI2-218	ENST00000583821	PPP5C	P53041	499 aa		6.08	□□□□□ -1.44
MSI2-218	ENST00000583821	GUCA2B	Q16661	112 aa		6.08	□□□□□ -1.44
MSI2-218	ENST00000583821	C15orf32	Q32M92	178 aa		6.08	□□□□□ -1.44
MSI2-218	ENST00000583821	PRSS48	Q7RTY5	328 aa		6.08	□□□□□ -1.44
MSI2-218	ENST00000583821	FAM223A	Q8IWN6	122 aa		6.08	□□□□□ -1.44
MSI2-218	ENST00000583821	ZNF680	Q8NEM1	530 aa		6.08	□□□□□ -1.44
MSI2-218	ENST00000583821	OSR1	Q8TAX0	266 aa	Predicted RBP	6.08	□□□□□ -1.44
MSI2-218	ENST00000583821	NUDCD2	Q8WVJ2	157 aa		6.08	□□□□□ -1.44
MSI2-218	ENST00000583821	ADTRP	Q96IZ2	230 aa		6.08	□□□□□ -1.44
MSI2-218	ENST00000583821	CCDC140	Q96MF4	163 aa		6.08	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms