RNA–Protein interactions for RNA: ENST00000582717.5

GGA3-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-214ENST00000582717 LRP11Q86VZ4 500 aa11.29□□□□□ -0.6
GGA3-214ENST00000582717 ABHD17AQ96GS6 310 aa11.29□□□□□ -0.6
GGA3-214ENST00000582717 DCAF16Q9NXF7 216 aa11.29□□□□□ -0.6
GGA3-214ENST00000582717 ATMQ13315 3056 aa11.28□□□□□ -0.6
GGA3-214ENST00000582717 C12orf77C9JDV5 145 aa11.28□□□□□ -0.6
GGA3-214ENST00000582717 RBFOX2O43251 390 aaKnown RBP eCLIP11.28□□□□□ -0.6
GGA3-214ENST00000582717 NUPR1O60356 82 aa11.28□□□□□ -0.6
GGA3-214ENST00000582717 TOMM20LQ6UXN7 152 aa11.28□□□□□ -0.6
GGA3-214ENST00000582717 ZNF705AQ6ZN79 300 aaPredicted RBP11.28□□□□□ -0.6
GGA3-214ENST00000582717 SDSLQ96GA7 329 aa11.28□□□□□ -0.6
GGA3-214ENST00000582717 HSD17B10Q99714 261 aaKnown RBP11.28□□□□□ -0.6
GGA3-214ENST00000582717 TMEM204Q9BSN7 226 aa11.28□□□□□ -0.6
GGA3-214ENST00000582717 DERL1Q9BUN8 251 aa11.28□□□□□ -0.6
GGA3-214ENST00000582717 TRAV38-1A0A0B4J264 116 aa11.28□□□□□ -0.6
GGA3-214ENST00000582717 IFNL4K9M1U5 179 aa11.28□□□□□ -0.6
GGA3-214ENST00000582717 CXorf1O96002 111 aa11.28□□□□□ -0.6
GGA3-214ENST00000582717 EGR1P18146 543 aa11.28□□□□□ -0.6
GGA3-214ENST00000582717 CEACAM8P31997 349 aaPredicted RBP11.28□□□□□ -0.6
GGA3-214ENST00000582717 BRWD1-AS2P59051 145 aa11.28□□□□□ -0.6
GGA3-214ENST00000582717 RELQ04864 619 aaPredicted RBP11.28□□□□□ -0.6
GGA3-214ENST00000582717 AARDQ4LEZ3 155 aa11.28□□□□□ -0.6
GGA3-214ENST00000582717 KRTCAP3Q53RY4 240 aa11.28□□□□□ -0.6
GGA3-214ENST00000582717 ZNF114Q8NC26 417 aa11.28□□□□□ -0.6
GGA3-214ENST00000582717 AURKAIP1Q9NWT8 199 aaPredicted RBP11.28□□□□□ -0.6
GGA3-214ENST00000582717 SSUH2Q9Y2M2 353 aa11.28□□□□□ -0.6
GGA3-214ENST00000582717 CADP27708 2225 aa11.28□□□□□ -0.6
GGA3-214ENST00000582717 DMXL2Q8TDJ6 3036 aa11.27□□□□□ -0.6
GGA3-214ENST00000582717 A0A1B0GUS0 222 aa11.27□□□□□ -0.61
GGA3-214ENST00000582717 FAM90A9PA6NNJ1 464 aa11.27□□□□□ -0.61
GGA3-214ENST00000582717 DLEU1O43261 78 aa11.27□□□□□ -0.61
GGA3-214ENST00000582717 STAG3L2P0CL84 134 aa11.27□□□□□ -0.61
GGA3-214ENST00000582717 STAG3L3P0CL85 134 aa11.27□□□□□ -0.61
GGA3-214ENST00000582717 DEFA4P12838 97 aa11.27□□□□□ -0.61
GGA3-214ENST00000582717 RBM14Q96PK6 669 aaKnown RBP11.27□□□□□ -0.61
GGA3-214ENST00000582717 SFXN3Q9BWM7 321 aa11.27□□□□□ -0.61
GGA3-214ENST00000582717 IL36BQ9NZH7 164 aa11.27□□□□□ -0.61
GGA3-214ENST00000582717 LY96Q9Y6Y9 160 aa11.27□□□□□ -0.61
GGA3-214ENST00000582717 ACACAQ13085 2346 aa11.27□□□□□ -0.61
GGA3-214ENST00000582717 TRBV20OR9-2A0A075B6H5 130 aa11.26□□□□□ -0.61
GGA3-214ENST00000582717 MARCH11A6NNE9 402 aa11.26□□□□□ -0.61
GGA3-214ENST00000582717 HBZP02008 142 aa11.26□□□□□ -0.61
GGA3-214ENST00000582717 CRISP2P16562 243 aa11.26□□□□□ -0.61
GGA3-214ENST00000582717 EDDM3BP56851 147 aa11.26□□□□□ -0.61
GGA3-214ENST00000582717 RPS16P62249 146 aaKnown RBP11.26□□□□□ -0.61
GGA3-214ENST00000582717 TPTE2P1Q5T6R2 138 aa11.26□□□□□ -0.61
GGA3-214ENST00000582717 Q6ZWC4 215 aa11.26□□□□□ -0.61
GGA3-214ENST00000582717 SPACA3Q8IXA5 215 aa11.26□□□□□ -0.61
GGA3-214ENST00000582717 OR2Z1Q8NG97 314 aa11.26□□□□□ -0.61
GGA3-214ENST00000582717 OR52L2PQ8NGH6 319 aa11.26□□□□□ -0.61
GGA3-214ENST00000582717 QTRT1Q9BXR0 403 aaKnown RBP11.26□□□□□ -0.61
GGA3-214ENST00000582717 METRNQ9UJH8 293 aa11.26□□□□□ -0.61
GGA3-214ENST00000582717 USF3Q68DE3 2245 aa11.26□□□□□ -0.61
GGA3-214ENST00000582717 TRBV9A0A0B4J1U6 114 aa11.26□□□□□ -0.61
GGA3-214ENST00000582717 ARL14EPLP0DKL9 152 aa11.26□□□□□ -0.61
GGA3-214ENST00000582717 ZNF90Q03938 601 aa11.26□□□□□ -0.61
GGA3-214ENST00000582717 C22orf34Q6ZV56 151 aa11.26□□□□□ -0.61
GGA3-214ENST00000582717 TCF23Q7RTU1 214 aa11.26□□□□□ -0.61
GGA3-214ENST00000582717 C1orf174Q8IYL3 243 aa11.26□□□□□ -0.61
GGA3-214ENST00000582717 Q8NA96 180 aa11.26□□□□□ -0.61
GGA3-214ENST00000582717 COQ2Q96H96 371 aa11.26□□□□□ -0.61
GGA3-214ENST00000582717 TMEM208Q9BTX3 173 aa11.26□□□□□ -0.61
GGA3-214ENST00000582717 SCNM1Q9BWG6 230 aa11.26□□□□□ -0.61
GGA3-214ENST00000582717 DUSP13Q9UII6 198 aa11.26□□□□□ -0.61
GGA3-214ENST00000582717 GOLT1BQ9Y3E0 138 aa11.26□□□□□ -0.61
GGA3-214ENST00000582717 RP1L1Q8IWN7 2480 aaPredicted RBP11.26□□□□□ -0.61
GGA3-214ENST00000582717 CUL9Q8IWT3 2517 aa11.25□□□□□ -0.61
GGA3-214ENST00000582717 LINC00614P0C842 121 aa11.25□□□□□ -0.61
GGA3-214ENST00000582717 AESQ08117 197 aa11.25□□□□□ -0.61
GGA3-214ENST00000582717 FAM27E3Q08E93 113 aa11.25□□□□□ -0.61
GGA3-214ENST00000582717 Q0VG73 95 aa11.25□□□□□ -0.61
GGA3-214ENST00000582717 PDLIM3Q53GG5 364 aaPredicted RBP11.25□□□□□ -0.61
GGA3-214ENST00000582717 GCSAMLQ5JQS6 135 aa11.25□□□□□ -0.61
GGA3-214ENST00000582717 LRRC29Q8WV35 223 aa11.25□□□□□ -0.61
GGA3-214ENST00000582717 VAMP8Q9BV40 100 aa11.25□□□□□ -0.61
GGA3-214ENST00000582717 MRPL18Q9H0U6 180 aaKnown RBP11.25□□□□□ -0.61
GGA3-214ENST00000582717 PATZ1Q9HBE1 687 aaKnown RBP11.25□□□□□ -0.61
GGA3-214ENST00000582717 GRIFINA4D1Z8 144 aa11.25□□□□□ -0.61
GGA3-214ENST00000582717 PGPEP1LA6NFU8 196 aa11.25□□□□□ -0.61
GGA3-214ENST00000582717 A8MXE2 369 aa11.25□□□□□ -0.61
GGA3-214ENST00000582717 BMP5P22003 454 aa11.25□□□□□ -0.61
GGA3-214ENST00000582717 TMPRSS3P57727 454 aa11.25□□□□□ -0.61
GGA3-214ENST00000582717 SPRNQ5BIV9 151 aa11.25□□□□□ -0.61
GGA3-214ENST00000582717 OR5AU1Q8NGC0 362 aa11.25□□□□□ -0.61
GGA3-214ENST00000582717 OCC1Q8TAD7 63 aa11.25□□□□□ -0.61
GGA3-214ENST00000582717 PRR7Q8TB68 274 aa11.25□□□□□ -0.61
GGA3-214ENST00000582717 TP53TG3Q9ULZ0 132 aa11.25□□□□□ -0.61
GGA3-214ENST00000582717 DOCK11Q5JSL3 2073 aa11.24□□□□□ -0.61
GGA3-214ENST00000582717 SCO2A0A1W2PP80 73 aa11.24□□□□□ -0.61
GGA3-214ENST00000582717 C9JCJ5 164 aa11.24□□□□□ -0.61
GGA3-214ENST00000582717 SERF1AO75920 110 aa11.24□□□□□ -0.61
GGA3-214ENST00000582717 MT-CO2P00403 227 aa11.24□□□□□ -0.61
GGA3-214ENST00000582717 SFTPCP11686 197 aa11.24□□□□□ -0.61
GGA3-214ENST00000582717 RPL19P84098 196 aaKnown RBP11.24□□□□□ -0.61
GGA3-214ENST00000582717 SMIM21Q3B7S5 101 aa11.24□□□□□ -0.61
GGA3-214ENST00000582717 SPINK9Q5DT21 86 aa11.24□□□□□ -0.61
GGA3-214ENST00000582717 FAM53AQ6NSI3 398 aaPredicted RBP11.24□□□□□ -0.61
GGA3-214ENST00000582717 VHLLQ6RSH7 139 aa11.24□□□□□ -0.61
GGA3-214ENST00000582717 C11orf52Q96A22 123 aa11.24□□□□□ -0.61
GGA3-214ENST00000582717 HSPB9Q9BQS6 159 aa11.24□□□□□ -0.61
GGA3-214ENST00000582717 DIDO1Q9BTC0 2240 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms