RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 GRIN2BQ13224 1484 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 CAMSAP1Q5T5Y3 1602 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 UNC13AQ9UPW8 1703 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 STRCQ7RTU9 1775 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 A0A087WUU8 490 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 MEIKINA0A087WXM9 373 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 PQLC2LA1A4F0 135 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 C9JCJ5 164 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 M0R381 172 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 PSMD12O00232 456 aaPredicted RBP0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 TGOLN2O43493 480 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 NOS1APO75052 506 aaPredicted RBP0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 PGLYRP1O75594 196 aaPredicted RBP0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 IGHV1-69P01742 117 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 C1QAP02745 245 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 IFNA16P05015 189 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 BPGMP07738 259 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 CXCL2P19875 107 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 CXCL3P19876 107 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 NFYAP23511 347 aaPredicted RBP0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 CDKN2CP42773 168 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 HAAOP46952 286 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 GABRA2P47869 451 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 XCL1P47992 114 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 IDH3GP51553 393 aaPredicted RBP0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 CTBP2P56545 445 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 RBM11P57052 281 aaKnown RBP0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 FXYD7P58549 80 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 TAS2R30P59541 319 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 HIST1H4AP62805 103 aaKnown RBP0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 MRPS15P82914 257 aaKnown RBP0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 SLC38A11Q08AI6 406 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 FADDQ13158 208 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 STX5Q13190 355 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 OR2F1Q13607 317 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 RSU1Q15404 277 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 SPA17Q15506 151 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 SAPCD1Q5SSQ6 148 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 HIST2H3PS2Q5TEC6 136 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 C1orf195Q5TG92 126 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 SYPL2Q5VXT5 272 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 GLT8D1Q68CQ7 371 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 ZNF550Q7Z398 422 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 COMMD7Q86VX2 200 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 LHFPL1Q86WI0 220 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 GID4Q8IVV7 300 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 DEFB125Q8N687 156 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 DAND5Q8N907 189 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 OR8J2Q8NGG1 315 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 OR13C8Q8NGS7 320 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 OR5J2Q8NH18 312 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 CLDND2Q8NHS1 167 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 RPS4Y2Q8TD47 263 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 SMCR5Q8TEV8 140 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 EEF1AKMT1Q8WVE0 214 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 ASB17Q8WXJ9 295 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 PPP1R14BQ96C90 147 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 GNPNAT1Q96EK6 184 aaPredicted RBP0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 CHMP6Q96FZ7 201 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 DIRAS2Q96HU8 199 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 TMEM109Q9BVC6 243 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 TTTY13Q9BZ97 58 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 GPR84Q9NQS5 396 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 SLC2A9Q9NRM0 540 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 TAAR3PQ9P1P4 343 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 ANAPC10Q9UM13 185 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 SLC22A13Q9Y226 551 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 ANGPT4Q9Y264 503 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 FAM215AQ9Y5M1 114 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 MICAL3Q7RTP6 2002 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 RTL1A6NKG5 1358 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 NUP155O75694 1391 aa0.53□□□□□ -2.32
SMCHD1-206ENST00000581631 MUC5ACP98088 5654 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 CHD3Q12873 2000 aaKnown RBP0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 MYOFQ9NZM1 2061 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 ALPK2Q86TB3 2170 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 COL6A6A6NMZ7 2263 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 TRGV5A0A0B4J1U4 118 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 A0A0J9YW62 118 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 A0A1W2PQD3 144 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 IRGMA1A4Y4 181 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 TMEM210A6NLX4 147 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 J3QRK9 145 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 BHLHE40O14503 412 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 TXNDC9O14530 226 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 CREBL2O60519 120 aaPredicted RBP0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 MSMBP08118 114 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 FGF6P10767 208 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 KCNE1P15382 129 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 RPS12P25398 132 aaKnown RBP0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 OR4D2P58180 307 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 SPCS3P61009 180 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 HIST1H3AP68431 136 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 CCL7P80098 99 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 MRPS25P82663 173 aaKnown RBP0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 H3F3AP84243 136 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 IFITM2Q01629 132 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 ZNF90Q03938 601 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 SRSF6Q13247 344 aaKnown RBP0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms