RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 S4R3C0 116 aa7.92□□□□□ -1.14
RFFL-209ENST00000581265 SMIM30A4D0T7 59 aa7.91□□□□□ -1.14
RFFL-209ENST00000581265 MRPS14O60783 128 aaKnown RBP7.91□□□□□ -1.14
RFFL-209ENST00000581265 SCAF4O95104 1147 aaKnown RBP7.91□□□□□ -1.14
RFFL-209ENST00000581265 FGF2P09038 288 aa7.91□□□□□ -1.14
RFFL-209ENST00000581265 MYOD1P15172 320 aa7.91□□□□□ -1.14
RFFL-209ENST00000581265 PTBP1P26599 531 aaKnown RBP eCLIP7.91□□□□□ -1.141e-6■■■■□ 21.1
RFFL-209ENST00000581265 HSPA13P48723 471 aa7.91□□□□□ -1.14
RFFL-209ENST00000581265 ELLP55199 621 aaPredicted RBP7.91□□□□□ -1.14
RFFL-209ENST00000581265 OR2B8PP59922 312 aa7.91□□□□□ -1.14
RFFL-209ENST00000581265 POU2AF1Q16633 256 aa7.91□□□□□ -1.14
RFFL-209ENST00000581265 TIMM50Q3ZCQ8 353 aa7.91□□□□□ -1.14
RFFL-209ENST00000581265 UBE2UQ5VVX9 321 aa7.91□□□□□ -1.14
RFFL-209ENST00000581265 UNQ9165/PRO28630Q6UXU0 137 aa7.91□□□□□ -1.14
RFFL-209ENST00000581265 WFDC3Q8IUB2 231 aa7.91□□□□□ -1.14
RFFL-209ENST00000581265 SPAG16Q8N0X2 631 aa7.91□□□□□ -1.14
RFFL-209ENST00000581265 ZNF502Q8TBZ5 544 aa7.91□□□□□ -1.14
RFFL-209ENST00000581265 LINC00476Q8WZB0 136 aa7.91□□□□□ -1.14
RFFL-209ENST00000581265 CNBD2Q96M20 576 aa7.91□□□□□ -1.14
RFFL-209ENST00000581265 GPHA2Q96T91 129 aa7.91□□□□□ -1.14
RFFL-209ENST00000581265 SRSF8Q9BRL6 282 aaKnown RBP7.91□□□□□ -1.14
RFFL-209ENST00000581265 VCX3BQ9H321 246 aa7.91□□□□□ -1.14
RFFL-209ENST00000581265 CCL28Q9NRJ3 127 aa7.91□□□□□ -1.14
RFFL-209ENST00000581265 TXNL4BQ9NX01 149 aaKnown RBP7.91□□□□□ -1.14
RFFL-209ENST00000581265 DAPK2Q9UIK4 370 aa7.91□□□□□ -1.14
RFFL-209ENST00000581265 SELENOKQ9Y6D0 94 aa7.91□□□□□ -1.14
RFFL-209ENST00000581265 IGLC7A0M8Q6 106 aa7.9□□□□□ -1.14
RFFL-209ENST00000581265 MFSD2BA6NFX1 497 aa7.9□□□□□ -1.14
RFFL-209ENST00000581265 UPK2O00526 184 aa7.9□□□□□ -1.14
RFFL-209ENST00000581265 REG1AP05451 166 aa7.9□□□□□ -1.14
RFFL-209ENST00000581265 FCGR2CP31995 323 aa7.9□□□□□ -1.14
RFFL-209ENST00000581265 TAS2R31P59538 309 aa7.9□□□□□ -1.14
RFFL-209ENST00000581265 ZNF585BQ52M93 769 aa7.9□□□□□ -1.14
RFFL-209ENST00000581265 ZNF773Q6PK81 442 aa7.9□□□□□ -1.14
RFFL-209ENST00000581265 BTNL8Q6UX41 500 aa7.9□□□□□ -1.14
RFFL-209ENST00000581265 IZUMO2Q6UXV1 221 aa7.9□□□□□ -1.14
RFFL-209ENST00000581265 RBPMS2Q6ZRY4 209 aaKnown RBP7.9□□□□□ -1.14
RFFL-209ENST00000581265 Q6ZWC4 215 aa7.9□□□□□ -1.14
RFFL-209ENST00000581265 BEST4Q8NFU0 473 aa7.9□□□□□ -1.14
RFFL-209ENST00000581265 SECTM1Q8WVN6 248 aa7.9□□□□□ -1.14
RFFL-209ENST00000581265 C5orf66Q9H5L9 145 aa7.9□□□□□ -1.14
RFFL-209ENST00000581265 HRASLSQ9HDD0 168 aa7.9□□□□□ -1.14
RFFL-209ENST00000581265 RHBDL2Q9NX52 303 aa7.9□□□□□ -1.14
RFFL-209ENST00000581265 THYN1Q9P016 225 aa7.9□□□□□ -1.14
RFFL-209ENST00000581265 TP53TG1Q9Y2A0 90 aa7.9□□□□□ -1.14
RFFL-209ENST00000581265 UFC1Q9Y3C8 167 aa7.9□□□□□ -1.14
RFFL-209ENST00000581265 PCLOQ9Y6V0 5065 aa7.9□□□□□ -1.15
RFFL-209ENST00000581265 TRAV3A0A0B4J244 114 aa7.89□□□□□ -1.15
RFFL-209ENST00000581265 TNFSF12O43508 249 aa7.89□□□□□ -1.15
RFFL-209ENST00000581265 HPRT1P00492 218 aa7.89□□□□□ -1.15
RFFL-209ENST00000581265 PPYP01298 95 aa7.89□□□□□ -1.15
RFFL-209ENST00000581265 PTHLHP12272 177 aa7.89□□□□□ -1.15
RFFL-209ENST00000581265 NQO2P16083 231 aa7.89□□□□□ -1.15
RFFL-209ENST00000581265 SCAND1P57086 179 aa7.89□□□□□ -1.15
RFFL-209ENST00000581265 ARPC4P59998 168 aa7.89□□□□□ -1.15
RFFL-209ENST00000581265 GABARAPL2P60520 117 aa7.89□□□□□ -1.15
RFFL-209ENST00000581265 SFXN4Q6P4A7 337 aa7.89□□□□□ -1.15
RFFL-209ENST00000581265 PLET1Q6UQ28 207 aa7.89□□□□□ -1.15
RFFL-209ENST00000581265 HOGA1Q86XE5 327 aa7.89□□□□□ -1.15
RFFL-209ENST00000581265 OR2C3Q8N628 320 aa7.89□□□□□ -1.15
RFFL-209ENST00000581265 OR1L6Q8NGR2 347 aa7.89□□□□□ -1.15
RFFL-209ENST00000581265 OR13F1Q8NGS4 319 aa7.89□□□□□ -1.15
RFFL-209ENST00000581265 LGALS14Q8TCE9 139 aa7.89□□□□□ -1.15
RFFL-209ENST00000581265 VN1R17PQ8TDU5 208 aa7.89□□□□□ -1.15
RFFL-209ENST00000581265 GIMAP1Q8WWP7 306 aa7.89□□□□□ -1.15
RFFL-209ENST00000581265 SPAG8Q99932 426 aaPredicted RBP7.89□□□□□ -1.15
RFFL-209ENST00000581265 ZNF436Q9C0F3 470 aaPredicted RBP7.89□□□□□ -1.15
RFFL-209ENST00000581265 COMMD5Q9GZQ3 224 aa7.89□□□□□ -1.15
RFFL-209ENST00000581265 RRP15Q9Y3B9 282 aaKnown RBP7.89□□□□□ -1.15
RFFL-209ENST00000581265 PLECQ15149 4684 aaKnown RBP7.88□□□□□ -1.15
RFFL-209ENST00000581265 TRAV18A0A075B6X5 111 aa7.88□□□□□ -1.15
RFFL-209ENST00000581265 A0A0A6YYH2 397 aa7.88□□□□□ -1.15
RFFL-209ENST00000581265 A6NJ64 397 aa7.88□□□□□ -1.15
RFFL-209ENST00000581265 SULT1C2O00338 296 aa7.88□□□□□ -1.15
RFFL-209ENST00000581265 UBE2CO00762 179 aa7.88□□□□□ -1.15
RFFL-209ENST00000581265 TSPAN4O14817 238 aa7.88□□□□□ -1.15
RFFL-209ENST00000581265 SPRY2O43597 315 aa7.88□□□□□ -1.15
RFFL-209ENST00000581265 ATF4P18848 351 aaPredicted RBP7.88□□□□□ -1.15
RFFL-209ENST00000581265 GPR183P32249 361 aa7.88□□□□□ -1.15
RFFL-209ENST00000581265 SDC2P34741 201 aa7.88□□□□□ -1.15
RFFL-209ENST00000581265 BMI1P35226 326 aa7.88□□□□□ -1.15
RFFL-209ENST00000581265 APOC4P55056 127 aa7.88□□□□□ -1.15
RFFL-209ENST00000581265 TNFRSF9Q07011 255 aa7.88□□□□□ -1.15
RFFL-209ENST00000581265 CATR1Q13166 79 aa7.88□□□□□ -1.15
RFFL-209ENST00000581265 THOC7Q6I9Y2 204 aaKnown RBP7.88□□□□□ -1.15
RFFL-209ENST00000581265 SLC38A6Q8IZM9 456 aa7.88□□□□□ -1.15
RFFL-209ENST00000581265 SPARTQ8N0X7 666 aa7.88□□□□□ -1.15
RFFL-209ENST00000581265 GVQW1Q8N7I0 195 aa7.88□□□□□ -1.15
RFFL-209ENST00000581265 CD300LFQ8TDQ1 290 aa7.88□□□□□ -1.15
RFFL-209ENST00000581265 ATP6V0BQ99437 205 aa7.88□□□□□ -1.15
RFFL-209ENST00000581265 QTRT1Q9BXR0 403 aaKnown RBP7.88□□□□□ -1.15
RFFL-209ENST00000581265 SLC5A7Q9GZV3 580 aa7.88□□□□□ -1.15
RFFL-209ENST00000581265 PLEKHA2Q9HB19 425 aa7.88□□□□□ -1.15
RFFL-209ENST00000581265 RAB26Q9ULW5 256 aa7.88□□□□□ -1.15
RFFL-209ENST00000581265 SSR3Q9UNL2 185 aa7.88□□□□□ -1.15
RFFL-209ENST00000581265 ETV7Q9Y603 341 aa7.88□□□□□ -1.15
RFFL-209ENST00000581265 IGHV3-35A0A0C4DH35 117 aa7.87□□□□□ -1.15
RFFL-209ENST00000581265 KIR2DL5BA0A0G2JN68 375 aa7.87□□□□□ -1.15
RFFL-209ENST00000581265 KIR2DL5BA0A0G2JPC4 375 aa7.87□□□□□ -1.15
RFFL-209ENST00000581265 A0A0J9YWU9 116 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms