RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 HES5Q5TA89 166 aa7.31□□□□□ -1.24
RFFL-208ENST00000581039 LIPKQ5VXJ0 399 aa7.31□□□□□ -1.24
RFFL-208ENST00000581039 TMEM91Q6ZNR0 172 aa7.31□□□□□ -1.24
RFFL-208ENST00000581039 Q6ZS49 121 aa7.31□□□□□ -1.24
RFFL-208ENST00000581039 LINC00336Q6ZUF6 198 aa7.31□□□□□ -1.24
RFFL-208ENST00000581039 SSX9Q7RTT3 188 aa7.31□□□□□ -1.24
RFFL-208ENST00000581039 APRG1Q8IVJ8 170 aa7.31□□□□□ -1.24
RFFL-208ENST00000581039 OR11H2Q8NH07 326 aa7.31□□□□□ -1.24
RFFL-208ENST00000581039 TCTEX1D2Q8WW35 142 aa7.31□□□□□ -1.24
RFFL-208ENST00000581039 HSD17B10Q99714 261 aaKnown RBP7.31□□□□□ -1.24
RFFL-208ENST00000581039 ZNF436Q9C0F3 470 aaPredicted RBP7.31□□□□□ -1.24
RFFL-208ENST00000581039 DAZ1Q9NQZ3 744 aaKnown RBP7.31□□□□□ -1.24
RFFL-208ENST00000581039 C8orf4Q9NR00 106 aa7.31□□□□□ -1.24
RFFL-208ENST00000581039 FKBP14Q9NWM8 211 aa7.31□□□□□ -1.24
RFFL-208ENST00000581039 SPATA2Q9UM82 520 aa7.31□□□□□ -1.24
RFFL-208ENST00000581039 OR2W1Q9Y3N9 320 aa7.31□□□□□ -1.24
RFFL-208ENST00000581039 V9GY05 133 aa7.31□□□□□ -1.24
RFFL-208ENST00000581039 IGKV1D-8A0A087WSZ0 117 aa7.3□□□□□ -1.24
RFFL-208ENST00000581039 IGLL5B9A064 214 aa7.3□□□□□ -1.24
RFFL-208ENST00000581039 PTGES3LE9PB15 166 aa7.3□□□□□ -1.24
RFFL-208ENST00000581039 MFNGO00587 321 aa7.3□□□□□ -1.24
RFFL-208ENST00000581039 CYB5BO43169 146 aa7.3□□□□□ -1.24
RFFL-208ENST00000581039 TGOLN2O43493 480 aa7.3□□□□□ -1.24
RFFL-208ENST00000581039 XRCC3O43542 346 aa7.3□□□□□ -1.24
RFFL-208ENST00000581039 S1PR2O95136 353 aa7.3□□□□□ -1.24
RFFL-208ENST00000581039 GNAO1P09471 354 aa7.3□□□□□ -1.24
RFFL-208ENST00000581039 CTXN2P0C2S0 81 aa7.3□□□□□ -1.24
RFFL-208ENST00000581039 MED14OSP0DP75 135 aa7.3□□□□□ -1.24
RFFL-208ENST00000581039 HIST1H1DP16402 221 aaKnown RBP7.3□□□□□ -1.24
RFFL-208ENST00000581039 NFYAP23511 347 aaPredicted RBP7.3□□□□□ -1.24
RFFL-208ENST00000581039 CALRP27797 417 aaKnown RBP7.3□□□□□ -1.24
RFFL-208ENST00000581039 TRAM1Q15629 374 aa7.3□□□□□ -1.24
RFFL-208ENST00000581039 MFSD4AQ8N468 514 aa7.3□□□□□ -1.24
RFFL-208ENST00000581039 PACRGLQ8N7B6 248 aa7.3□□□□□ -1.24
RFFL-208ENST00000581039 OR4A5Q8NH83 315 aa7.3□□□□□ -1.24
RFFL-208ENST00000581039 CD300LFQ8TDQ1 290 aa7.3□□□□□ -1.24
RFFL-208ENST00000581039 TMEM190Q8WZ59 177 aa7.3□□□□□ -1.24
RFFL-208ENST00000581039 AIFM2Q9BRQ8 373 aa7.3□□□□□ -1.24
RFFL-208ENST00000581039 C20orf24Q9BUV8 137 aa7.3□□□□□ -1.24
RFFL-208ENST00000581039 C11orf68Q9H3H3 251 aaKnown RBP7.3□□□□□ -1.24
RFFL-208ENST00000581039 HRASLSQ9HDD0 168 aa7.3□□□□□ -1.24
RFFL-208ENST00000581039 LSM2Q9Y333 95 aaKnown RBP7.3□□□□□ -1.24
RFFL-208ENST00000581039 METTL21EPA6NDL7 271 aa7.29□□□□□ -1.24
RFFL-208ENST00000581039 OR2T8A6NH00 312 aa7.29□□□□□ -1.24
RFFL-208ENST00000581039 IGLV2-14P01704 120 aa7.29□□□□□ -1.24
RFFL-208ENST00000581039 CTSDP07339 412 aaPredicted RBP7.29□□□□□ -1.24
RFFL-208ENST00000581039 HSMCR30P0CW71 290 aa7.29□□□□□ -1.24
RFFL-208ENST00000581039 PSMA1P25786 263 aaKnown RBP7.29□□□□□ -1.24
RFFL-208ENST00000581039 ADMP35318 185 aa7.29□□□□□ -1.24
RFFL-208ENST00000581039 MFAP2P55001 183 aa7.29□□□□□ -1.24
RFFL-208ENST00000581039 BRWD1-AS2P59051 145 aa7.29□□□□□ -1.24
RFFL-208ENST00000581039 OR2B8PP59922 312 aa7.29□□□□□ -1.24
RFFL-208ENST00000581039 RPS25P62851 125 aaKnown RBP7.29□□□□□ -1.24
RFFL-208ENST00000581039 VN1R17PQ8TDU5 208 aa7.29□□□□□ -1.24
RFFL-208ENST00000581039 TAS2R8Q9NYW2 309 aa7.29□□□□□ -1.24
RFFL-208ENST00000581039 APLNQ9ULZ1 77 aa7.29□□□□□ -1.24
RFFL-208ENST00000581039 IGKV1D-13A0A0B4J2D9 117 aa7.28□□□□□ -1.24
RFFL-208ENST00000581039 CGB1A6NKQ9 187 aa7.28□□□□□ -1.24
RFFL-208ENST00000581039 C11orf94C9JXX5 98 aa7.28□□□□□ -1.24
RFFL-208ENST00000581039 K7EMT4 169 aa7.28□□□□□ -1.24
RFFL-208ENST00000581039 NDUFA4O00483 81 aa7.28□□□□□ -1.24
RFFL-208ENST00000581039 DEFB4AO15263 64 aa7.28□□□□□ -1.24
RFFL-208ENST00000581039 ZNF207O43670 478 aaKnown RBP7.28□□□□□ -1.24
RFFL-208ENST00000581039 IGKV1-13P0DP09 117 aa7.28□□□□□ -1.24
RFFL-208ENST00000581039 RAB6AP20340 208 aa7.28□□□□□ -1.24
RFFL-208ENST00000581039 DTYMKP23919 212 aa7.28□□□□□ -1.24
RFFL-208ENST00000581039 IRF3Q14653 427 aa7.28□□□□□ -1.24
RFFL-208ENST00000581039 ARL6IP1Q15041 203 aa7.28□□□□□ -1.24
RFFL-208ENST00000581039 SPSB3Q6PJ21 355 aa7.28□□□□□ -1.24
RFFL-208ENST00000581039 ZNF66Q6ZN08 573 aa7.28□□□□□ -1.24
RFFL-208ENST00000581039 GVQW1Q8N7I0 195 aa7.28□□□□□ -1.24
RFFL-208ENST00000581039 BSCL2Q96G97 398 aaPredicted RBP7.28□□□□□ -1.24
RFFL-208ENST00000581039 SRSF8Q9BRL6 282 aaKnown RBP7.28□□□□□ -1.24
RFFL-208ENST00000581039 COMMD5Q9GZQ3 224 aa7.28□□□□□ -1.24
RFFL-208ENST00000581039 SCN3BQ9NY72 215 aa7.28□□□□□ -1.24
RFFL-208ENST00000581039 BET1LQ9NYM9 111 aa7.28□□□□□ -1.24
RFFL-208ENST00000581039 IGHV3OR16-8A0A075B7F1 116 aa7.27□□□□□ -1.25
RFFL-208ENST00000581039 IGLC7A0M8Q6 106 aa7.27□□□□□ -1.25
RFFL-208ENST00000581039 PDCD5O14737 125 aa7.27□□□□□ -1.25
RFFL-208ENST00000581039 MRPS14O60783 128 aaKnown RBP7.27□□□□□ -1.25
RFFL-208ENST00000581039 TFPI2P48307 235 aa7.27□□□□□ -1.25
RFFL-208ENST00000581039 EIF4EBP1Q13541 118 aaPredicted RBP7.27□□□□□ -1.25
RFFL-208ENST00000581039 TMEM187Q14656 261 aa7.27□□□□□ -1.25
RFFL-208ENST00000581039 ZNF124Q15973 351 aa7.27□□□□□ -1.25
RFFL-208ENST00000581039 TIMM50Q3ZCQ8 353 aa7.27□□□□□ -1.25
RFFL-208ENST00000581039 CDNFQ49AH0 187 aa7.27□□□□□ -1.25
RFFL-208ENST00000581039 SLC25A24Q6NUK1 477 aa7.27□□□□□ -1.25
RFFL-208ENST00000581039 CNIH2Q6PI25 160 aa7.27□□□□□ -1.25
RFFL-208ENST00000581039 NR2C2APQ86WQ0 139 aa7.27□□□□□ -1.25
RFFL-208ENST00000581039 CENPSQ8N2Z9 138 aa7.27□□□□□ -1.25
RFFL-208ENST00000581039 GPHA2Q96T91 129 aa7.27□□□□□ -1.25
RFFL-208ENST00000581039 RNF2Q99496 336 aa7.27□□□□□ -1.25
RFFL-208ENST00000581039 ATG5Q9H1Y0 275 aa7.27□□□□□ -1.25
RFFL-208ENST00000581039 DCSTAMPQ9H295 470 aa7.27□□□□□ -1.25
RFFL-208ENST00000581039 ACOT13Q9NPJ3 140 aa7.27□□□□□ -1.25
RFFL-208ENST00000581039 SMPXQ9UHP9 88 aa7.27□□□□□ -1.25
RFFL-208ENST00000581039 ELF5Q9UKW6 265 aaPredicted RBP7.27□□□□□ -1.25
RFFL-208ENST00000581039 A0A1B0GVY2 172 aa7.26□□□□□ -1.25
RFFL-208ENST00000581039 C15orf62A8K5M9 175 aa7.26□□□□□ -1.25
RFFL-208ENST00000581039 UPK2O00526 184 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms