RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 GABARAPH6UMI1 98 aa3.1□□□□□ -1.91
SMG8-205ENST00000580798 M0R233 179 aa3.1□□□□□ -1.91
SMG8-205ENST00000580798 KLF7O75840 302 aaPredicted RBP3.1□□□□□ -1.91
SMG8-205ENST00000580798 TNFSF13O75888 250 aa3.1□□□□□ -1.91
SMG8-205ENST00000580798 CECR9P0C854 216 aa3.1□□□□□ -1.91
SMG8-205ENST00000580798 HLA-DOBP13765 273 aa3.1□□□□□ -1.91
SMG8-205ENST00000580798 SNCAP37840 140 aa3.1□□□□□ -1.91
SMG8-205ENST00000580798 DIO3P55073 304 aa3.1□□□□□ -1.91
SMG8-205ENST00000580798 NDUFV3P56181 108 aaKnown RBP3.1□□□□□ -1.91
SMG8-205ENST00000580798 LINC01547P58512 204 aaPredicted RBP3.1□□□□□ -1.91
SMG8-205ENST00000580798 KRTAP10-8P60410 259 aa3.1□□□□□ -1.91
SMG8-205ENST00000580798 TMEM258P61165 79 aa3.1□□□□□ -1.91
SMG8-205ENST00000580798 PLGLB1Q02325 96 aa3.1□□□□□ -1.91
SMG8-205ENST00000580798 ENDOGQ14249 297 aaKnown RBP3.1□□□□□ -1.91
SMG8-205ENST00000580798 CST6Q15828 149 aa3.1□□□□□ -1.91
SMG8-205ENST00000580798 NXNL2Q5VZ03 156 aa3.1□□□□□ -1.91
SMG8-205ENST00000580798 C11orf71Q6IPW1 123 aa3.1□□□□□ -1.91
SMG8-205ENST00000580798 MRPL54Q6P161 138 aaKnown RBP3.1□□□□□ -1.91
SMG8-205ENST00000580798 ZNF880Q6PDB4 577 aa3.1□□□□□ -1.91
SMG8-205ENST00000580798 AMTNQ6UX39 209 aa3.1□□□□□ -1.91
SMG8-205ENST00000580798 KRTAP7-1Q8IUC3 87 aa3.1□□□□□ -1.91
SMG8-205ENST00000580798 C10orf126Q8N4M7 172 aa3.1□□□□□ -1.91
SMG8-205ENST00000580798 NPWQ8N729 165 aa3.1□□□□□ -1.91
SMG8-205ENST00000580798 OR11H7Q8NGC8 314 aa3.1□□□□□ -1.91
SMG8-205ENST00000580798 OR4K13Q8NH42 304 aa3.1□□□□□ -1.91
SMG8-205ENST00000580798 OR5AK2Q8NH90 309 aa3.1□□□□□ -1.91
SMG8-205ENST00000580798 CCL17Q92583 94 aa3.1□□□□□ -1.91
SMG8-205ENST00000580798 MRPS24Q96EL2 167 aaKnown RBP3.1□□□□□ -1.91
SMG8-205ENST00000580798 TEX37Q96LM6 180 aa3.1□□□□□ -1.91
SMG8-205ENST00000580798 C2orf50Q96LR7 162 aa3.1□□□□□ -1.91
SMG8-205ENST00000580798 IGF2BP2-AS1Q96M15 143 aa3.1□□□□□ -1.91
SMG8-205ENST00000580798 OR2A5Q96R48 311 aa3.1□□□□□ -1.91
SMG8-205ENST00000580798 RHNO1Q9BSD3 238 aa3.1□□□□□ -1.91
SMG8-205ENST00000580798 WDR61Q9GZS3 305 aaKnown RBP3.1□□□□□ -1.91
SMG8-205ENST00000580798 AICDAQ9GZX7 198 aa3.1□□□□□ -1.91
SMG8-205ENST00000580798 NAA60Q9H7X0 242 aa3.1□□□□□ -1.91
SMG8-205ENST00000580798 ASF1BQ9NVP2 202 aa3.1□□□□□ -1.91
SMG8-205ENST00000580798 ZNF226Q9NYT6 803 aa3.1□□□□□ -1.91
SMG8-205ENST00000580798 UQCR10Q9UDW1 63 aa3.1□□□□□ -1.91
SMG8-205ENST00000580798 MTFP1Q9UDX5 166 aa3.1□□□□□ -1.91
SMG8-205ENST00000580798 ROBO3Q96MS0 1386 aa3.1□□□□□ -1.91
SMG8-205ENST00000580798 HFM1A2PYH4 1435 aa3.1□□□□□ -1.91
SMG8-205ENST00000580798 TECPR2O15040 1411 aa3.1□□□□□ -1.91
SMG8-205ENST00000580798 PRG4Q92954 1404 aaPredicted RBP3.1□□□□□ -1.91
SMG8-205ENST00000580798 MYOM2P54296 1465 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 FANCD2Q9BXW9 1451 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 ARHGEF11O15085 1522 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 LMTK2Q8IWU2 1503 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 ZNF608Q9ULD9 1512 aaPredicted RBP3.09□□□□□ -1.91
SMG8-205ENST00000580798 TRAV9-1A0A075B6T8 112 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 IRGMA1A4Y4 181 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 TLCD2A6NGC4 264 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 C12orf77C9JDV5 145 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 AGPAT2O15120 278 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 SCRG1O75711 98 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 NGFP01138 241 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 IGLC1P0CG04 106 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 ZNF883P0CG24 379 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 SCGB1C2P0DMR2 95 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 SMIM10L2AP0DMW4 78 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 SMIM10L2BP0DMW5 78 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 CCL1P22362 96 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 CRYGSP22914 178 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 PSMB8P28062 276 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 OPRK1P41145 380 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 P2RX1P51575 399 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 MP68P56378 58 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 KLRD1Q13241 179 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 ZNF146Q15072 292 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 KLF17Q5JT82 389 aaPredicted RBP3.09□□□□□ -1.91
SMG8-205ENST00000580798 AADACL3Q5VUY0 350 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 KDM4DQ6B0I6 523 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 LCN12Q6JVE5 192 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 ALKAL2Q6UX46 152 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 TMEM14EPQ6UXP3 125 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 DNM1P46Q6ZS02 220 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 NOTCH2NLQ7Z3S9 236 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 VN1R4Q7Z5H5 301 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 PRR15Q8IV56 129 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 ODF3L1Q8IXM7 274 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 HIST3H2BBQ8N257 126 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 YIPF7Q8N8F6 280 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 OR10J6PQ8NGY7 276 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 OR10AC1Q8NH08 325 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 SGMS2Q8NHU3 365 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 SCGB1C1Q8TD33 95 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 GEMIN6Q8WXD5 167 aaKnown RBP3.09□□□□□ -1.91
SMG8-205ENST00000580798 C17orf77Q96MU5 243 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 MCEEQ96PE7 176 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 AQP10Q96PS8 301 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 SPACA5Q96QH8 159 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 ADAT1Q9BUB4 502 aaKnown RBP3.09□□□□□ -1.91
SMG8-205ENST00000580798 SEC11CQ9BY50 192 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 RBM12B-AS1Q9P1G2 102 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 SPRR3Q9UBC9 169 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 NUFIP1Q9UHK0 495 aaKnown RBP3.09□□□□□ -1.91
SMG8-205ENST00000580798 ANAPC10Q9UM13 185 aa3.09□□□□□ -1.91
SMG8-205ENST00000580798 AMMECR1Q9Y4X0 333 aaPredicted RBP3.09□□□□□ -1.91
SMG8-205ENST00000580798 CACNA1FO60840 1977 aa3.09□□□□□ -1.92
SMG8-205ENST00000580798 MAPKBP1O60336 1514 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms