RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 FAM90A26D6RGX4 464 aa12.31□□□□□ -0.44
SS18-216ENST00000580751 SHOXO15266 292 aa12.31□□□□□ -0.44
SS18-216ENST00000580751 LY86O95711 162 aa12.31□□□□□ -0.44
SS18-216ENST00000580751 KRASP01116 189 aa12.31□□□□□ -0.44
SS18-216ENST00000580751 PET100P0DJ07 73 aa12.31□□□□□ -0.44
SS18-216ENST00000580751 MDKP21741 143 aaPredicted RBP12.31□□□□□ -0.44
SS18-216ENST00000580751 AWAT1Q58HT5 328 aa12.31□□□□□ -0.44
SS18-216ENST00000580751 ZBTB8BQ8NAP8 495 aaPredicted RBP12.31□□□□□ -0.44
SS18-216ENST00000580751 RBMXL1Q96E39 390 aaKnown RBP12.31□□□□□ -0.44
SS18-216ENST00000580751 FYTTD1Q96QD9 318 aaKnown RBP12.31□□□□□ -0.44
SS18-216ENST00000580751 MDFIQ99750 246 aa12.31□□□□□ -0.44
SS18-216ENST00000580751 RANGRFQ9HD47 186 aaPredicted RBP12.31□□□□□ -0.44
SS18-216ENST00000580751 BET1LQ9NYM9 111 aa12.31□□□□□ -0.44
SS18-216ENST00000580751 RRHO14718 337 aa12.3□□□□□ -0.44
SS18-216ENST00000580751 PITX3O75364 302 aa12.3□□□□□ -0.44
SS18-216ENST00000580751 IL6RP08887 468 aaPredicted RBP12.3□□□□□ -0.44
SS18-216ENST00000580751 CNTFRP26992 372 aa12.3□□□□□ -0.44
SS18-216ENST00000580751 UBE2KP61086 200 aa12.3□□□□□ -0.44
SS18-216ENST00000580751 PLGLAQ15195 96 aa12.3□□□□□ -0.44
SS18-216ENST00000580751 C5orf64Q2M2E5 130 aa12.3□□□□□ -0.44
SS18-216ENST00000580751 VMA21Q3ZAQ7 101 aa12.3□□□□□ -0.44
SS18-216ENST00000580751 C9orf152Q5JTZ5 239 aa12.3□□□□□ -0.44
SS18-216ENST00000580751 FOXRED2Q8IWF2 684 aa12.3□□□□□ -0.44
SS18-216ENST00000580751 TEX45Q8NA69 505 aa12.3□□□□□ -0.44
SS18-216ENST00000580751 DMBX1Q8NFW5 382 aa12.3□□□□□ -0.44
SS18-216ENST00000580751 GPR146Q96CH1 333 aa12.3□□□□□ -0.44
SS18-216ENST00000580751 OR10C1Q96KK4 312 aa12.3□□□□□ -0.44
SS18-216ENST00000580751 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.3□□□□□ -0.44
SS18-216ENST00000580751 FKBP11Q9NYL4 201 aa12.3□□□□□ -0.44
SS18-216ENST00000580751 SH2D7A6NKC9 451 aaPredicted RBP12.29□□□□□ -0.44
SS18-216ENST00000580751 CCSO14618 274 aa12.29□□□□□ -0.44
SS18-216ENST00000580751 KCNAB3O43448 404 aa12.29□□□□□ -0.44
SS18-216ENST00000580751 SIX6O95475 246 aa12.29□□□□□ -0.44
SS18-216ENST00000580751 HLA-DRB1P01911 266 aa12.29□□□□□ -0.44
SS18-216ENST00000580751 PSMB6P28072 239 aa12.29□□□□□ -0.44
SS18-216ENST00000580751 G6PCP35575 357 aa12.29□□□□□ -0.44
SS18-216ENST00000580751 VDAC2P45880 294 aaPredicted RBP12.29□□□□□ -0.44
SS18-216ENST00000580751 PSG5Q15238 335 aa12.29□□□□□ -0.44
SS18-216ENST00000580751 ZNF429Q86V71 674 aa12.29□□□□□ -0.44
SS18-216ENST00000580751 PUSL1Q8N0Z8 303 aaKnown RBP12.29□□□□□ -0.44
SS18-216ENST00000580751 OR4D5Q8NGN0 318 aa12.29□□□□□ -0.44
SS18-216ENST00000580751 OR2T35Q8NGX2 323 aa12.29□□□□□ -0.44
SS18-216ENST00000580751 OR52E5Q8NH55 327 aa12.29□□□□□ -0.44
SS18-216ENST00000580751 FBXL15Q9H469 300 aa12.29□□□□□ -0.44
SS18-216ENST00000580751 METTL1Q9UBP6 276 aaKnown RBP12.29□□□□□ -0.44
SS18-216ENST00000580751 RNF114Q9Y508 228 aa12.29□□□□□ -0.44
SS18-216ENST00000580751 MPTX1A8MV57 137 aa12.28□□□□□ -0.44
SS18-216ENST00000580751 ST8SIA3O43173 380 aa12.28□□□□□ -0.44
SS18-216ENST00000580751 SLC25A17O43808 307 aa12.28□□□□□ -0.44
SS18-216ENST00000580751 IGLV2-23P01705 113 aa12.28□□□□□ -0.44
SS18-216ENST00000580751 IGHG2P01859 326 aa12.28□□□□□ -0.44
SS18-216ENST00000580751 C1QBP02746 253 aa12.28□□□□□ -0.44
SS18-216ENST00000580751 ID3Q02535 119 aa12.28□□□□□ -0.44
SS18-216ENST00000580751 PDLIM3Q53GG5 364 aaPredicted RBP12.28□□□□□ -0.44
SS18-216ENST00000580751 C12orf54Q6X4T0 127 aa12.28□□□□□ -0.44
SS18-216ENST00000580751 Q6ZS46 218 aa12.28□□□□□ -0.44
SS18-216ENST00000580751 SLC35E3Q7Z769 313 aa12.28□□□□□ -0.44
SS18-216ENST00000580751 PPP1R1CQ8WVI7 109 aa12.28□□□□□ -0.44
SS18-216ENST00000580751 SERTAD4Q9NUC0 356 aa12.28□□□□□ -0.44
SS18-216ENST00000580751 TMEM140Q9NV12 185 aa12.28□□□□□ -0.44
SS18-216ENST00000580751 CACNG5Q9UF02 275 aa12.28□□□□□ -0.44
SS18-216ENST00000580751 PRNDQ9UKY0 176 aa12.28□□□□□ -0.44
SS18-216ENST00000580751 ZNF257Q9Y2Q1 563 aa12.28□□□□□ -0.44
SS18-216ENST00000580751 SIGLEC9Q9Y336 463 aa12.28□□□□□ -0.44
SS18-216ENST00000580751 MED6O75586 246 aa12.27□□□□□ -0.45
SS18-216ENST00000580751 RLN2P04090 185 aa12.27□□□□□ -0.45
SS18-216ENST00000580751 SLC25A4P12235 298 aa12.27□□□□□ -0.45
SS18-216ENST00000580751 NKX2-1P43699 371 aaPredicted RBP12.27□□□□□ -0.45
SS18-216ENST00000580751 PROK1P58294 105 aa12.27□□□□□ -0.45
SS18-216ENST00000580751 OR4A47Q6IF82 309 aa12.27□□□□□ -0.45
SS18-216ENST00000580751 OR4A16Q8NH70 328 aa12.27□□□□□ -0.45
SS18-216ENST00000580751 TMEM167AQ8TBQ9 72 aa12.27□□□□□ -0.45
SS18-216ENST00000580751 HYLS1Q96M11 299 aa12.27□□□□□ -0.45
SS18-216ENST00000580751 GSKIPQ9P0R6 139 aa12.27□□□□□ -0.45
SS18-216ENST00000580751 A0A0G2JRQ6 117 aa12.26□□□□□ -0.45
SS18-216ENST00000580751 SRRM4A7MD48 611 aaKnown RBP12.26□□□□□ -0.45
SS18-216ENST00000580751 UPK2O00526 184 aa12.26□□□□□ -0.45
SS18-216ENST00000580751 MPC2O95563 127 aa12.26□□□□□ -0.45
SS18-216ENST00000580751 LYL1P12980 280 aa12.26□□□□□ -0.45
SS18-216ENST00000580751 MAS1LP35410 378 aa12.26□□□□□ -0.45
SS18-216ENST00000580751 TMEM95Q3KNT9 176 aa12.26□□□□□ -0.45
SS18-216ENST00000580751 ZFP69Q49AA0 526 aa12.26□□□□□ -0.45
SS18-216ENST00000580751 TMEM65Q6PI78 240 aa12.26□□□□□ -0.45
SS18-216ENST00000580751 Q6ZRM9 215 aa12.26□□□□□ -0.45
SS18-216ENST00000580751 PPP1R27Q86WC6 154 aa12.26□□□□□ -0.45
SS18-216ENST00000580751 OR1S1Q8NH92 325 aa12.26□□□□□ -0.45
SS18-216ENST00000580751 THAP6Q8TBB0 222 aa12.26□□□□□ -0.45
SS18-216ENST00000580751 HSPB7Q9UBY9 170 aa12.26□□□□□ -0.45
SS18-216ENST00000580751 FOXA2Q9Y261 457 aaPredicted RBP12.26□□□□□ -0.45
SS18-216ENST00000580751 C15orf61A6NNL5 157 aa12.25□□□□□ -0.45
SS18-216ENST00000580751 HMSDA8MTL9 139 aa12.25□□□□□ -0.45
SS18-216ENST00000580751 HAX1O00165 279 aa12.25□□□□□ -0.45
SS18-216ENST00000580751 AP4M1O00189 453 aa12.25□□□□□ -0.45
SS18-216ENST00000580751 KBTBD11O94819 623 aa12.25□□□□□ -0.45
SS18-216ENST00000580751 CRYGBP07316 175 aa12.25□□□□□ -0.45
SS18-216ENST00000580751 SAA1P0DJI8 122 aaPredicted RBP12.25□□□□□ -0.45
SS18-216ENST00000580751 PVALBP20472 110 aaPredicted RBP12.25□□□□□ -0.45
SS18-216ENST00000580751 C11orf87Q6NUJ2 197 aa12.25□□□□□ -0.45
SS18-216ENST00000580751 PRSS54Q6PEW0 395 aa12.25□□□□□ -0.45
SS18-216ENST00000580751 MMD2Q8IY49 270 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms