RNA–Protein interactions for RNA: ENST00000579611.1

CDC42EP4-204, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-204ENST00000579611 DPPA5A6NC42 116 aa12.92□□□□□ -0.34
CDC42EP4-204ENST00000579611 H0Y980 276 aa12.92□□□□□ -0.34
CDC42EP4-204ENST00000579611 OR2J3O76001 311 aa12.92□□□□□ -0.34
CDC42EP4-204ENST00000579611 AREGP15514 252 aa12.92□□□□□ -0.34
CDC42EP4-204ENST00000579611 HIST1H1BP16401 226 aaKnown RBP12.92□□□□□ -0.34
CDC42EP4-204ENST00000579611 HLA-DMAP28067 261 aa12.92□□□□□ -0.34
CDC42EP4-204ENST00000579611 HRH1P35367 487 aa12.92□□□□□ -0.34
CDC42EP4-204ENST00000579611 MZT2AQ6P582 158 aa12.92□□□□□ -0.34
CDC42EP4-204ENST00000579611 Q8N1Y9 231 aa12.92□□□□□ -0.34
CDC42EP4-204ENST00000579611 HRASLSQ9HDD0 168 aa12.92□□□□□ -0.34
CDC42EP4-204ENST00000579611 FAM212BQ9NTI7 297 aaPredicted RBP12.92□□□□□ -0.34
CDC42EP4-204ENST00000579611 TMEM140Q9NV12 185 aa12.92□□□□□ -0.34
CDC42EP4-204ENST00000579611 U3KQK5 164 aa12.92□□□□□ -0.34
CDC42EP4-204ENST00000579611 A8MZ25 164 aa12.91□□□□□ -0.34
CDC42EP4-204ENST00000579611 GPR31O00270 319 aa12.91□□□□□ -0.34
CDC42EP4-204ENST00000579611 HPGDSO60760 199 aa12.91□□□□□ -0.34
CDC42EP4-204ENST00000579611 S1PR2O95136 353 aa12.91□□□□□ -0.34
CDC42EP4-204ENST00000579611 ZNF182P17025 639 aaPredicted RBP12.91□□□□□ -0.34
CDC42EP4-204ENST00000579611 RCVRNP35243 200 aa12.91□□□□□ -0.34
CDC42EP4-204ENST00000579611 THOC7Q6I9Y2 204 aaKnown RBP12.91□□□□□ -0.34
CDC42EP4-204ENST00000579611 LPCAT3Q6P1A2 487 aa12.91□□□□□ -0.34
CDC42EP4-204ENST00000579611 DGCR14Q96DF8 476 aaKnown RBP12.91□□□□□ -0.34
CDC42EP4-204ENST00000579611 RSRP1Q9BUV0 290 aa12.91□□□□□ -0.34
CDC42EP4-204ENST00000579611 NAA50Q9GZZ1 169 aaKnown RBP12.91□□□□□ -0.34
CDC42EP4-204ENST00000579611 FXYD6Q9H0Q3 95 aa12.91□□□□□ -0.34
CDC42EP4-204ENST00000579611 PEMTQ9UBM1 199 aa12.91□□□□□ -0.34
CDC42EP4-204ENST00000579611 FBXL7Q9UJT9 491 aa12.91□□□□□ -0.34
CDC42EP4-204ENST00000579611 KMT2CQ8NEZ4 4911 aaKnown RBP12.9□□□□□ -0.34
CDC42EP4-204ENST00000579611 IGLV11-55A0A075B6I3 123 aa12.9□□□□□ -0.34
CDC42EP4-204ENST00000579611 TRAV3A0A0B4J244 114 aa12.9□□□□□ -0.34
CDC42EP4-204ENST00000579611 IGLC7A0M8Q6 106 aa12.9□□□□□ -0.34
CDC42EP4-204ENST00000579611 RLN1P04808 185 aa12.9□□□□□ -0.34
CDC42EP4-204ENST00000579611 ALDH3B2P48448 385 aa12.9□□□□□ -0.34
CDC42EP4-204ENST00000579611 UCP3P55916 312 aa12.9□□□□□ -0.34
CDC42EP4-204ENST00000579611 HSD17B13Q7Z5P4 300 aaPredicted RBP12.9□□□□□ -0.34
CDC42EP4-204ENST00000579611 HAPLN4Q86UW8 402 aa12.9□□□□□ -0.34
CDC42EP4-204ENST00000579611 OR2K2Q8NGT1 345 aa12.9□□□□□ -0.34
CDC42EP4-204ENST00000579611 THAP7Q9BT49 309 aaPredicted RBP12.9□□□□□ -0.34
CDC42EP4-204ENST00000579611 COMMD5Q9GZQ3 224 aa12.9□□□□□ -0.34
CDC42EP4-204ENST00000579611 MARCH11A6NNE9 402 aa12.89□□□□□ -0.35
CDC42EP4-204ENST00000579611 LGALS9O00182 355 aa12.89□□□□□ -0.35
CDC42EP4-204ENST00000579611 GGCTO75223 188 aaKnown RBP12.89□□□□□ -0.35
CDC42EP4-204ENST00000579611 NDUFB8O95169 186 aa12.89□□□□□ -0.35
CDC42EP4-204ENST00000579611 FRMD6-AS1P0C7T7 363 aa12.89□□□□□ -0.35
CDC42EP4-204ENST00000579611 MYOD1P15172 320 aa12.89□□□□□ -0.35
CDC42EP4-204ENST00000579611 ZNF585BQ52M93 769 aa12.89□□□□□ -0.35
CDC42EP4-204ENST00000579611 GPR107Q5VW38 600 aa12.89□□□□□ -0.35
CDC42EP4-204ENST00000579611 C19orf35Q6ZS72 473 aa12.89□□□□□ -0.35
CDC42EP4-204ENST00000579611 GPHB5Q86YW7 130 aa12.89□□□□□ -0.35
CDC42EP4-204ENST00000579611 SNX29P2Q8IUI4 249 aa12.89□□□□□ -0.35
CDC42EP4-204ENST00000579611 Q8N402 240 aa12.89□□□□□ -0.35
CDC42EP4-204ENST00000579611 DMBX1Q8NFW5 382 aa12.89□□□□□ -0.35
CDC42EP4-204ENST00000579611 FCAMRQ8WWV6 532 aa12.89□□□□□ -0.35
CDC42EP4-204ENST00000579611 QTRT1Q9BXR0 403 aaKnown RBP12.89□□□□□ -0.35
CDC42EP4-204ENST00000579611 MRPS26Q9BYN8 205 aaKnown RBP12.89□□□□□ -0.35
CDC42EP4-204ENST00000579611 LPAR6P43657 344 aa12.88□□□□□ -0.35
CDC42EP4-204ENST00000579611 ERVK-16P61578 105 aa12.88□□□□□ -0.35
CDC42EP4-204ENST00000579611 TSPAN5P62079 268 aa12.88□□□□□ -0.35
CDC42EP4-204ENST00000579611 LCN12Q6JVE5 192 aa12.88□□□□□ -0.35
CDC42EP4-204ENST00000579611 SBSPONQ8IVN8 264 aa12.88□□□□□ -0.35
CDC42EP4-204ENST00000579611 C15orf40Q8WUR7 153 aa12.88□□□□□ -0.35
CDC42EP4-204ENST00000579611 EEF1AKMT3Q96AZ1 226 aa12.88□□□□□ -0.35
CDC42EP4-204ENST00000579611 CXorf58Q96LI9 332 aa12.88□□□□□ -0.35
CDC42EP4-204ENST00000579611 CCDC140Q96MF4 163 aa12.88□□□□□ -0.35
CDC42EP4-204ENST00000579611 ASCL2Q99929 193 aa12.88□□□□□ -0.35
CDC42EP4-204ENST00000579611 NBEAL2Q6ZNJ1 2754 aa12.88□□□□□ -0.35
CDC42EP4-204ENST00000579611 TRBV7-1A0A0A6YYK4 115 aa12.87□□□□□ -0.35
CDC42EP4-204ENST00000579611 TEX50A0A1B0GTY4 177 aa12.87□□□□□ -0.35
CDC42EP4-204ENST00000579611 DEFA4P12838 97 aa12.87□□□□□ -0.35
CDC42EP4-204ENST00000579611 PTBP1P26599 531 aaKnown RBP eCLIP12.87□□□□□ -0.359e-7■■■■■ 27.6
CDC42EP4-204ENST00000579611 S100GP29377 79 aa12.87□□□□□ -0.35
CDC42EP4-204ENST00000579611 ADAMTSL5Q6ZMM2 481 aa12.87□□□□□ -0.35
CDC42EP4-204ENST00000579611 SLC38A6Q8IZM9 456 aa12.87□□□□□ -0.35
CDC42EP4-204ENST00000579611 NDUFA4L2Q9NRX3 87 aa12.87□□□□□ -0.35
CDC42EP4-204ENST00000579611 C19orf73Q9NVV2 129 aa12.87□□□□□ -0.35
CDC42EP4-204ENST00000579611 PPP5D1E7EU14 171 aa12.86□□□□□ -0.35
CDC42EP4-204ENST00000579611 KRASP01116 189 aa12.86□□□□□ -0.35
CDC42EP4-204ENST00000579611 TRAPPC2P0DI81 140 aa12.86□□□□□ -0.35
CDC42EP4-204ENST00000579611 TRAPPC2BP0DI82 140 aa12.86□□□□□ -0.35
CDC42EP4-204ENST00000579611 IGHV4-30-4P0DP06 118 aa12.86□□□□□ -0.35
CDC42EP4-204ENST00000579611 TBPP20226 339 aa12.86□□□□□ -0.35
CDC42EP4-204ENST00000579611 GPR141Q7Z602 305 aa12.86□□□□□ -0.35
CDC42EP4-204ENST00000579611 OR1L8Q8NGR8 309 aa12.86□□□□□ -0.35
CDC42EP4-204ENST00000579611 THYN1Q9P016 225 aa12.86□□□□□ -0.35
CDC42EP4-204ENST00000579611 MTFP1Q9UDX5 166 aa12.86□□□□□ -0.35
CDC42EP4-204ENST00000579611 DNAH7Q8WXX0 4024 aa12.85□□□□□ -0.35
CDC42EP4-204ENST00000579611 FAM25AB3EWG3 89 aa12.85□□□□□ -0.35
CDC42EP4-204ENST00000579611 FAM25CB3EWG5 89 aa12.85□□□□□ -0.35
CDC42EP4-204ENST00000579611 FAM25GB3EWG6 89 aa12.85□□□□□ -0.35
CDC42EP4-204ENST00000579611 OR2C1O95371 312 aa12.85□□□□□ -0.35
CDC42EP4-204ENST00000579611 REG1AP05451 166 aa12.85□□□□□ -0.35
CDC42EP4-204ENST00000579611 ARL3P36405 182 aa12.85□□□□□ -0.35
CDC42EP4-204ENST00000579611 WT1-ASQ06250 92 aa12.85□□□□□ -0.35
CDC42EP4-204ENST00000579611 CLEC19AQ6UXS0 136 aa12.85□□□□□ -0.35
CDC42EP4-204ENST00000579611 LHFPL1Q86WI0 220 aa12.85□□□□□ -0.35
CDC42EP4-204ENST00000579611 LAX1Q8IWV1 398 aa12.85□□□□□ -0.35
CDC42EP4-204ENST00000579611 SGPP2Q8IWX5 399 aa12.85□□□□□ -0.35
CDC42EP4-204ENST00000579611 ARRDC1Q8N5I2 433 aa12.85□□□□□ -0.35
CDC42EP4-204ENST00000579611 GDPD1Q8N9F7 314 aa12.85□□□□□ -0.35
CDC42EP4-204ENST00000579611 OR5B3Q8NH48 314 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms