RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 ITLN2Q8WWU7 325 aaPredicted RBP8.54□□□□□ -1.04
MSI2-209ENST00000579483 SLC25A38Q96DW6 304 aa8.54□□□□□ -1.04
MSI2-209ENST00000579483 IFI27L2Q9H2X8 130 aa8.54□□□□□ -1.04
MSI2-209ENST00000579483 RPUSD1Q9UJJ7 312 aaKnown RBP8.54□□□□□ -1.04
MSI2-209ENST00000579483 FOXA2Q9Y261 457 aaPredicted RBP8.54□□□□□ -1.04
MSI2-209ENST00000579483 SNURFLB1AK76 121 aa8.54□□□□□ -1.04
MSI2-209ENST00000579483 NPFFO15130 113 aa8.54□□□□□ -1.04
MSI2-209ENST00000579483 PAGE4O60829 102 aa8.54□□□□□ -1.04
MSI2-209ENST00000579483 LYPD3O95274 346 aa8.54□□□□□ -1.04
MSI2-209ENST00000579483 PTBP3O95758 552 aaKnown RBP8.54□□□□□ -1.04
MSI2-209ENST00000579483 REG1AP05451 166 aa8.54□□□□□ -1.04
MSI2-209ENST00000579483 MELTFP08582 738 aa8.54□□□□□ -1.04
MSI2-209ENST00000579483 ADIPOQQ15848 244 aa8.54□□□□□ -1.04
MSI2-209ENST00000579483 CLLU1Q5K131 121 aa8.54□□□□□ -1.04
MSI2-209ENST00000579483 RNF223E7ERA6 249 aa8.54□□□□□ -1.04
MSI2-209ENST00000579483 IGKV3-15P01624 115 aa8.54□□□□□ -1.04
MSI2-209ENST00000579483 RPL35P42766 123 aaKnown RBP8.54□□□□□ -1.04
MSI2-209ENST00000579483 TEX261Q6UWH6 196 aa8.54□□□□□ -1.04
MSI2-209ENST00000579483 OR51M1Q9H341 326 aa8.54□□□□□ -1.04
MSI2-209ENST00000579483 PPP1R3EQ9H7J1 279 aa8.54□□□□□ -1.04
MSI2-209ENST00000579483 HSPB7Q9UBY9 170 aa8.54□□□□□ -1.04
MSI2-209ENST00000579483 PHLDA3Q9Y5J5 127 aa8.54□□□□□ -1.04
MSI2-209ENST00000579483 PGPA6NDG6 321 aa8.54□□□□□ -1.04
MSI2-209ENST00000579483 FCN1O00602 326 aa8.54□□□□□ -1.04
MSI2-209ENST00000579483 ATP6V0CP27449 155 aa8.54□□□□□ -1.04
MSI2-209ENST00000579483 GPR183P32249 361 aa8.54□□□□□ -1.04
MSI2-209ENST00000579483 NSUN5P1Q3KNT7 163 aa8.54□□□□□ -1.04
MSI2-209ENST00000579483 ZNF497Q6ZNH5 498 aa8.54□□□□□ -1.04
MSI2-209ENST00000579483 OR2D3Q8NGH3 330 aa8.54□□□□□ -1.04
MSI2-209ENST00000579483 TAF15Q92804 592 aaKnown RBP eCLIP8.54□□□□□ -1.04
MSI2-209ENST00000579483 Q96MF0 132 aa8.54□□□□□ -1.04
MSI2-209ENST00000579483 BPESC1Q9GZL8 116 aa8.54□□□□□ -1.04
MSI2-209ENST00000579483 NPDC1Q9NQX5 325 aaPredicted RBP8.54□□□□□ -1.04
MSI2-209ENST00000579483 DOCK4Q8N1I0 1966 aa8.53□□□□□ -1.04
MSI2-209ENST00000579483 FAM74A7A6NL05 159 aa8.53□□□□□ -1.04
MSI2-209ENST00000579483 TRGC1P0CF51 173 aa8.53□□□□□ -1.04
MSI2-209ENST00000579483 KLK2P20151 261 aa8.53□□□□□ -1.04
MSI2-209ENST00000579483 CAMPP49913 170 aa8.53□□□□□ -1.04
MSI2-209ENST00000579483 BATFQ16520 125 aa8.53□□□□□ -1.04
MSI2-209ENST00000579483 NABP1Q96AH0 204 aa8.53□□□□□ -1.04
MSI2-209ENST00000579483 DIDO1Q9BTC0 2240 aaKnown RBP8.53□□□□□ -1.04
MSI2-209ENST00000579483 MSGN1A6NI15 193 aa8.53□□□□□ -1.04
MSI2-209ENST00000579483 HIST1H1AQ02539 215 aaPredicted RBP8.53□□□□□ -1.04
MSI2-209ENST00000579483 CD69Q07108 199 aa8.53□□□□□ -1.04
MSI2-209ENST00000579483 LDLRAD3Q86YD5 345 aa8.53□□□□□ -1.04
MSI2-209ENST00000579483 SRSF12Q8WXF0 261 aaKnown RBP8.53□□□□□ -1.04
MSI2-209ENST00000579483 RPRMQ9NS64 109 aa8.53□□□□□ -1.04
MSI2-209ENST00000579483 TRAV41A0A0B4J266 112 aa8.53□□□□□ -1.04
MSI2-209ENST00000579483 TIMM23O14925 209 aa8.53□□□□□ -1.04
MSI2-209ENST00000579483 P2RY4P51582 365 aa8.53□□□□□ -1.04
MSI2-209ENST00000579483 TUSC1Q2TAM9 212 aa8.53□□□□□ -1.04
MSI2-209ENST00000579483 C11orf91Q3C1V1 193 aa8.53□□□□□ -1.04
MSI2-209ENST00000579483 MORN2Q502X0 79 aa8.53□□□□□ -1.04
MSI2-209ENST00000579483 LEMD1Q68G75 181 aa8.53□□□□□ -1.04
MSI2-209ENST00000579483 ZNF660Q6AZW8 331 aaPredicted RBP8.53□□□□□ -1.04
MSI2-209ENST00000579483 CLEC19AQ6UXS0 136 aa8.53□□□□□ -1.04
MSI2-209ENST00000579483 LRP11Q86VZ4 500 aa8.53□□□□□ -1.04
MSI2-209ENST00000579483 LHFPL5Q8TAF8 219 aa8.53□□□□□ -1.04
MSI2-209ENST00000579483 SPSB4Q96A44 273 aa8.53□□□□□ -1.04
MSI2-209ENST00000579483 RBM38Q9H0Z9 239 aaKnown RBP8.53□□□□□ -1.04
MSI2-209ENST00000579483 NYNRINQ9P2P1 1898 aaKnown RBP8.53□□□□□ -1.04
MSI2-209ENST00000579483 TRBV6-7A0A0A0MS04 114 aa8.53□□□□□ -1.04
MSI2-209ENST00000579483 E7EQL1 145 aa8.53□□□□□ -1.04
MSI2-209ENST00000579483 H7C1H1 209 aa8.53□□□□□ -1.04
MSI2-209ENST00000579483 GPX4P36969 197 aaPredicted RBP8.53□□□□□ -1.04
MSI2-209ENST00000579483 C19orf54Q5BKX5 351 aa8.53□□□□□ -1.04
MSI2-209ENST00000579483 ZNF600Q6ZNG1 722 aa8.53□□□□□ -1.04
MSI2-209ENST00000579483 STHQ8IWL8 128 aa8.53□□□□□ -1.04
MSI2-209ENST00000579483 KLHDC1Q8N7A1 406 aa8.53□□□□□ -1.04
MSI2-209ENST00000579483 SOSTQ9BQB4 213 aa8.53□□□□□ -1.04
MSI2-209ENST00000579483 IGHV2-26A0A0B4J1V2 119 aa8.52□□□□□ -1.05
MSI2-209ENST00000579483 IGHV1-8P0DP01 117 aa8.52□□□□□ -1.05
MSI2-209ENST00000579483 SPNP16150 400 aa8.52□□□□□ -1.05
MSI2-209ENST00000579483 RPS11P62280 158 aaKnown RBP eCLIP8.52□□□□□ -1.05
MSI2-209ENST00000579483 CX3CL1P78423 397 aa8.52□□□□□ -1.05
MSI2-209ENST00000579483 RNF166Q96A37 237 aaPredicted RBP8.52□□□□□ -1.05
MSI2-209ENST00000579483 WNT10AQ9GZT5 417 aa8.52□□□□□ -1.05
MSI2-209ENST00000579483 TEX50A0A1B0GTY4 177 aa8.52□□□□□ -1.05
MSI2-209ENST00000579483 RRHO14718 337 aa8.52□□□□□ -1.05
MSI2-209ENST00000579483 CD33P20138 364 aa8.52□□□□□ -1.05
MSI2-209ENST00000579483 NHLRC3Q5JS37 347 aa8.52□□□□□ -1.05
MSI2-209ENST00000579483 FOXB2Q5VYV0 432 aa8.52□□□□□ -1.05
MSI2-209ENST00000579483 PVRIGQ6DKI7 326 aa8.52□□□□□ -1.05
MSI2-209ENST00000579483 CYP2G1PQ6ZSU1 146 aa8.52□□□□□ -1.05
MSI2-209ENST00000579483 SLX1AQ9BQ83 275 aa8.52□□□□□ -1.05
MSI2-209ENST00000579483 CDC42EP3Q9UKI2 254 aa8.52□□□□□ -1.05
MSI2-209ENST00000579483 ZNF257Q9Y2Q1 563 aa8.52□□□□□ -1.05
MSI2-209ENST00000579483 SCN2AQ99250 2005 aa8.52□□□□□ -1.05
MSI2-209ENST00000579483 FAM53AQ6NSI3 398 aaPredicted RBP8.52□□□□□ -1.05
MSI2-209ENST00000579483 TEX38Q6PEX7 206 aa8.52□□□□□ -1.05
MSI2-209ENST00000579483 SAA2-SAA4A0A096LPE2 208 aa8.52□□□□□ -1.05
MSI2-209ENST00000579483 UPK2O00526 184 aa8.52□□□□□ -1.05
MSI2-209ENST00000579483 CA2P00918 260 aa8.52□□□□□ -1.05
MSI2-209ENST00000579483 SAA2P0DJI9 122 aaPredicted RBP8.52□□□□□ -1.05
MSI2-209ENST00000579483 EFNB3Q15768 340 aa8.52□□□□□ -1.05
MSI2-209ENST00000579483 TPTE2P1Q5T6R2 138 aa8.52□□□□□ -1.05
MSI2-209ENST00000579483 C1QL2Q7Z5L3 287 aa8.52□□□□□ -1.05
MSI2-209ENST00000579483 C11orf42Q8N5U0 333 aa8.52□□□□□ -1.05
MSI2-209ENST00000579483 TMEM190Q8WZ59 177 aa8.52□□□□□ -1.05
MSI2-209ENST00000579483 DKK4Q9UBT3 224 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms