RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 ACOT13Q9NPJ3 140 aa6.34□□□□□ -1.39
CASC3-206ENST00000579238 UBQLN2Q9UHD9 624 aa6.34□□□□□ -1.39
CASC3-206ENST00000579238 TRAV1-2A0A0B4J238 106 aa6.33□□□□□ -1.4
CASC3-206ENST00000579238 IGHV3-35A0A0C4DH35 117 aa6.33□□□□□ -1.4
CASC3-206ENST00000579238 CGB1A6NKQ9 187 aa6.33□□□□□ -1.4
CASC3-206ENST00000579238 IFITM5A6NNB3 132 aa6.33□□□□□ -1.4
CASC3-206ENST00000579238 CASQ2O14958 399 aaPredicted RBP6.33□□□□□ -1.4
CASC3-206ENST00000579238 REG1AP05451 166 aa6.33□□□□□ -1.4
CASC3-206ENST00000579238 HLA-GP17693 338 aa6.33□□□□□ -1.4
CASC3-206ENST00000579238 OR10A3P58181 314 aa6.33□□□□□ -1.4
CASC3-206ENST00000579238 BRWD1-AS2P59051 145 aa6.33□□□□□ -1.4
CASC3-206ENST00000579238 LAMTOR1Q6IAA8 161 aa6.33□□□□□ -1.4
CASC3-206ENST00000579238 CNIH2Q6PI25 160 aa6.33□□□□□ -1.4
CASC3-206ENST00000579238 PLET1Q6UQ28 207 aa6.33□□□□□ -1.4
CASC3-206ENST00000579238 ZNF66Q6ZN08 573 aa6.33□□□□□ -1.4
CASC3-206ENST00000579238 SSX9Q7RTT3 188 aa6.33□□□□□ -1.4
CASC3-206ENST00000579238 MFSD4AQ8N468 514 aa6.33□□□□□ -1.4
CASC3-206ENST00000579238 OR4A5Q8NH83 315 aa6.33□□□□□ -1.4
CASC3-206ENST00000579238 SRSF8Q9BRL6 282 aaKnown RBP6.33□□□□□ -1.4
CASC3-206ENST00000579238 AIFM2Q9BRQ8 373 aa6.33□□□□□ -1.4
CASC3-206ENST00000579238 DCSTAMPQ9H295 470 aa6.33□□□□□ -1.4
CASC3-206ENST00000579238 VCXQ9H320 206 aa6.33□□□□□ -1.4
CASC3-206ENST00000579238 DUSP21Q9H596 190 aa6.33□□□□□ -1.4
CASC3-206ENST00000579238 BET1LQ9NYM9 111 aa6.33□□□□□ -1.4
CASC3-206ENST00000579238 ELF5Q9UKW6 265 aaPredicted RBP6.33□□□□□ -1.4
CASC3-206ENST00000579238 SPATA2Q9UM82 520 aa6.33□□□□□ -1.4
CASC3-206ENST00000579238 TPRKBQ9Y3C4 175 aa6.33□□□□□ -1.4
CASC3-206ENST00000579238 IGLC7A0M8Q6 106 aa6.32□□□□□ -1.4
CASC3-206ENST00000579238 EBAG9O00559 213 aa6.32□□□□□ -1.4
CASC3-206ENST00000579238 TGOLN2O43493 480 aa6.32□□□□□ -1.4
CASC3-206ENST00000579238 RGS10O43665 173 aa6.32□□□□□ -1.4
CASC3-206ENST00000579238 RPL35AP18077 110 aaKnown RBP6.32□□□□□ -1.4
CASC3-206ENST00000579238 MYL9P24844 172 aa6.32□□□□□ -1.4
CASC3-206ENST00000579238 PTBP1P26599 531 aaKnown RBP eCLIP6.32□□□□□ -1.4
CASC3-206ENST00000579238 OR2B8PP59922 312 aa6.32□□□□□ -1.4
CASC3-206ENST00000579238 ODF3L2Q3SX64 289 aa6.32□□□□□ -1.4
CASC3-206ENST00000579238 TIMM50Q3ZCQ8 353 aa6.32□□□□□ -1.4
CASC3-206ENST00000579238 CDNFQ49AH0 187 aa6.32□□□□□ -1.4
CASC3-206ENST00000579238 HACD4Q5VWC8 232 aa6.32□□□□□ -1.4
CASC3-206ENST00000579238 TMEM190Q8WZ59 177 aa6.32□□□□□ -1.4
CASC3-206ENST00000579238 GALNT14Q96FL9 552 aa6.32□□□□□ -1.4
CASC3-206ENST00000579238 MGLLQ99685 303 aa6.32□□□□□ -1.4
CASC3-206ENST00000579238 ATG5Q9H1Y0 275 aa6.32□□□□□ -1.4
CASC3-206ENST00000579238 MAP6D1Q9H9H5 199 aa6.32□□□□□ -1.4
CASC3-206ENST00000579238 DAZ1Q9NQZ3 744 aaKnown RBP6.32□□□□□ -1.4
CASC3-206ENST00000579238 TAS2R8Q9NYW2 309 aa6.32□□□□□ -1.4
CASC3-206ENST00000579238 THYN1Q9P016 225 aa6.32□□□□□ -1.4
CASC3-206ENST00000579238 VPS13DQ5THJ4 4388 aa6.32□□□□□ -1.4
CASC3-206ENST00000579238 OR4C46A6NHA9 309 aa6.31□□□□□ -1.4
CASC3-206ENST00000579238 CYB5BO43169 146 aa6.31□□□□□ -1.4
CASC3-206ENST00000579238 S1PR2O95136 353 aa6.31□□□□□ -1.4
CASC3-206ENST00000579238 RAB3BP20337 219 aa6.31□□□□□ -1.4
CASC3-206ENST00000579238 MSMO1Q15800 293 aa6.31□□□□□ -1.4
CASC3-206ENST00000579238 PRSS48Q7RTY5 328 aa6.31□□□□□ -1.4
CASC3-206ENST00000579238 VN1R17PQ8TDU5 208 aa6.31□□□□□ -1.4
CASC3-206ENST00000579238 BSCL2Q96G97 398 aaPredicted RBP6.31□□□□□ -1.4
CASC3-206ENST00000579238 GPHA2Q96T91 129 aa6.31□□□□□ -1.4
CASC3-206ENST00000579238 CCDC90BQ9GZT6 254 aa6.31□□□□□ -1.4
CASC3-206ENST00000579238 C6orf62Q9GZU0 229 aaPredicted RBP6.31□□□□□ -1.4
CASC3-206ENST00000579238 MFFQ9GZY8 342 aa6.31□□□□□ -1.4
CASC3-206ENST00000579238 HRASLSQ9HDD0 168 aa6.31□□□□□ -1.4
CASC3-206ENST00000579238 TMEM235A6NFC5 223 aa6.3□□□□□ -1.4
CASC3-206ENST00000579238 OR2T8A6NH00 312 aa6.3□□□□□ -1.4
CASC3-206ENST00000579238 K7EMT4 169 aa6.3□□□□□ -1.4
CASC3-206ENST00000579238 NDUFA4O00483 81 aa6.3□□□□□ -1.4
CASC3-206ENST00000579238 UPK2O00526 184 aa6.3□□□□□ -1.4
CASC3-206ENST00000579238 RBFOX2O43251 390 aaKnown RBP eCLIP6.3□□□□□ -1.4
CASC3-206ENST00000579238 FGF2P09038 288 aa6.3□□□□□ -1.4
CASC3-206ENST00000579238 RPA2P15927 270 aa6.3□□□□□ -1.4
CASC3-206ENST00000579238 FCGR2BP31994 310 aaPredicted RBP6.3□□□□□ -1.4
CASC3-206ENST00000579238 TAS2R31P59538 309 aa6.3□□□□□ -1.4
CASC3-206ENST00000579238 GNG2P59768 71 aa6.3□□□□□ -1.4
CASC3-206ENST00000579238 POU2AF1Q16633 256 aa6.3□□□□□ -1.4
CASC3-206ENST00000579238 THOC7Q6I9Y2 204 aaKnown RBP6.3□□□□□ -1.4
CASC3-206ENST00000579238 SPSB3Q6PJ21 355 aa6.3□□□□□ -1.4
CASC3-206ENST00000579238 SPAG16Q8N0X2 631 aa6.3□□□□□ -1.4
CASC3-206ENST00000579238 ZBTB34Q8NCN2 500 aa6.3□□□□□ -1.4
CASC3-206ENST00000579238 OR5B3Q8NH48 314 aa6.3□□□□□ -1.4
CASC3-206ENST00000579238 CD300LFQ8TDQ1 290 aa6.3□□□□□ -1.4
CASC3-206ENST00000579238 GATAD1Q8WUU5 269 aa6.3□□□□□ -1.4
CASC3-206ENST00000579238 NUDCD2Q8WVJ2 157 aa6.3□□□□□ -1.4
CASC3-206ENST00000579238 ATP6V0BQ99437 205 aa6.3□□□□□ -1.4
CASC3-206ENST00000579238 QTRT1Q9BXR0 403 aaKnown RBP6.3□□□□□ -1.4
CASC3-206ENST00000579238 COMMD5Q9GZQ3 224 aa6.3□□□□□ -1.4
CASC3-206ENST00000579238 CSTL1Q9H114 145 aa6.3□□□□□ -1.4
CASC3-206ENST00000579238 C11orf68Q9H3H3 251 aaKnown RBP6.3□□□□□ -1.4
CASC3-206ENST00000579238 ANXA10Q9UJ72 324 aa6.3□□□□□ -1.4
CASC3-206ENST00000579238 DNAH6Q9C0G6 4158 aa6.3□□□□□ -1.4
CASC3-206ENST00000579238 TRAV3A0A0B4J244 114 aa6.29□□□□□ -1.4
CASC3-206ENST00000579238 TRDV1A0A1B0GX56 115 aa6.29□□□□□ -1.4
CASC3-206ENST00000579238 MPTX1A8MV57 137 aa6.29□□□□□ -1.4
CASC3-206ENST00000579238 SULT1C2O00338 296 aa6.29□□□□□ -1.4
CASC3-206ENST00000579238 TNFSF12O43508 249 aa6.29□□□□□ -1.4
CASC3-206ENST00000579238 SSX5O60225 188 aa6.29□□□□□ -1.4
CASC3-206ENST00000579238 SCGNO76038 276 aa6.29□□□□□ -1.4
CASC3-206ENST00000579238 HPRT1P00492 218 aa6.29□□□□□ -1.4
CASC3-206ENST00000579238 IFNA4P05014 189 aa6.29□□□□□ -1.4
CASC3-206ENST00000579238 CTSDP07339 412 aaPredicted RBP6.29□□□□□ -1.4
CASC3-206ENST00000579238 NQO2P16083 231 aa6.29□□□□□ -1.4
CASC3-206ENST00000579238 CMC4P56277 68 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms