RNA–Protein interactions for RNA: ENST00000578600.1

PTPRM-208, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-208ENST00000578600 HLA-DRB5Q30154 266 aa3.83□□□□□ -1.8
PTPRM-208ENST00000578600 KRT71Q3SY84 523 aa3.83□□□□□ -1.8
PTPRM-208ENST00000578600 LCN12Q6JVE5 192 aa3.83□□□□□ -1.8
PTPRM-208ENST00000578600 Q6ZR54 194 aa3.83□□□□□ -1.8
PTPRM-208ENST00000578600 FUNDC1Q8IVP5 155 aa3.83□□□□□ -1.8
PTPRM-208ENST00000578600 CHST4Q8NCG5 386 aa3.83□□□□□ -1.8
PTPRM-208ENST00000578600 OR2K2Q8NGT1 345 aa3.83□□□□□ -1.8
PTPRM-208ENST00000578600 OR2T10Q8NGZ9 312 aa3.83□□□□□ -1.8
PTPRM-208ENST00000578600 OR4K13Q8NH42 304 aa3.83□□□□□ -1.8
PTPRM-208ENST00000578600 FANK1Q8TC84 345 aa3.83□□□□□ -1.8
PTPRM-208ENST00000578600 RNF133Q8WVZ7 376 aa3.83□□□□□ -1.8
PTPRM-208ENST00000578600 SEH1LQ96EE3 360 aa3.83□□□□□ -1.8
PTPRM-208ENST00000578600 KCTD14Q9BQ13 255 aaPredicted RBP3.83□□□□□ -1.8
PTPRM-208ENST00000578600 SLC25A22Q9H936 323 aa3.83□□□□□ -1.8
PTPRM-208ENST00000578600 HES4Q9HCC6 221 aa3.83□□□□□ -1.8
PTPRM-208ENST00000578600 DNAH1Q9P2D7 4330 aa3.83□□□□□ -1.8
PTPRM-208ENST00000578600 DYNC2H1Q8NCM8 4307 aaKnown RBP3.82□□□□□ -1.8
PTPRM-208ENST00000578600 DHRS12A0PJE2 317 aa3.82□□□□□ -1.8
PTPRM-208ENST00000578600 FAM183AA6NL82 134 aa3.82□□□□□ -1.8
PTPRM-208ENST00000578600 ZNF729A6NN14 1252 aaPredicted RBP3.82□□□□□ -1.8
PTPRM-208ENST00000578600 RIIAD1A6NNX1 92 aa3.82□□□□□ -1.8
PTPRM-208ENST00000578600 C12orf77C9JDV5 145 aa3.82□□□□□ -1.8
PTPRM-208ENST00000578600 H3BSH0 61 aa3.82□□□□□ -1.8
PTPRM-208ENST00000578600 GATBO75879 557 aaKnown RBP3.82□□□□□ -1.8
PTPRM-208ENST00000578600 SLC2A1P11166 492 aa3.82□□□□□ -1.8
PTPRM-208ENST00000578600 PIPP12273 146 aaPredicted RBP3.82□□□□□ -1.8
PTPRM-208ENST00000578600 HIST1H1CP16403 213 aaKnown RBP3.82□□□□□ -1.8
PTPRM-208ENST00000578600 PAX6P26367 422 aa3.82□□□□□ -1.8
PTPRM-208ENST00000578600 PSMB8P28062 276 aa3.82□□□□□ -1.8
PTPRM-208ENST00000578600 OMPP47874 163 aa3.82□□□□□ -1.8
PTPRM-208ENST00000578600 APOC4P55056 127 aa3.82□□□□□ -1.8
PTPRM-208ENST00000578600 ZNF121P58317 390 aaPredicted RBP3.82□□□□□ -1.8
PTPRM-208ENST00000578600 EBI3Q14213 229 aa3.82□□□□□ -1.8
PTPRM-208ENST00000578600 GRK1Q15835 563 aa3.82□□□□□ -1.8
PTPRM-208ENST00000578600 CLVS2Q5SYC1 327 aa3.82□□□□□ -1.8
PTPRM-208ENST00000578600 PLCXD3Q63HM9 321 aa3.82□□□□□ -1.8
PTPRM-208ENST00000578600 FAHD1Q6P587 224 aa3.82□□□□□ -1.8
PTPRM-208ENST00000578600 ANGPTL5Q86XS5 388 aa3.82□□□□□ -1.8
PTPRM-208ENST00000578600 Q8N402 240 aa3.82□□□□□ -1.8
PTPRM-208ENST00000578600 NKAPP1Q8N9T2 125 aa3.82□□□□□ -1.8
PTPRM-208ENST00000578600 OR10X1Q8NGY0 326 aa3.82□□□□□ -1.8
PTPRM-208ENST00000578600 TMEM106AQ96A25 262 aa3.82□□□□□ -1.8
PTPRM-208ENST00000578600 C16orf74Q96GX8 76 aa3.82□□□□□ -1.8
PTPRM-208ENST00000578600 CEP19Q96LK0 163 aa3.82□□□□□ -1.8
PTPRM-208ENST00000578600 OR52B2Q96RD2 323 aa3.82□□□□□ -1.8
PTPRM-208ENST00000578600 ATP5SQ99766 215 aa3.82□□□□□ -1.8
PTPRM-208ENST00000578600 MROQ9BYG7 248 aa3.82□□□□□ -1.8
PTPRM-208ENST00000578600 CST11Q9H112 138 aa3.82□□□□□ -1.8
PTPRM-208ENST00000578600 OR52D1Q9H346 318 aa3.82□□□□□ -1.8
PTPRM-208ENST00000578600 GEMIN7Q9H840 131 aaKnown RBP3.82□□□□□ -1.8
PTPRM-208ENST00000578600 MRPL22Q9NWU5 206 aaKnown RBP3.82□□□□□ -1.8
PTPRM-208ENST00000578600 ADA2Q9NZK5 511 aa3.82□□□□□ -1.8
PTPRM-208ENST00000578600 TMEM14AQ9Y6G1 99 aa3.82□□□□□ -1.8
PTPRM-208ENST00000578600 ENPP4Q9Y6X5 453 aa3.82□□□□□ -1.8
PTPRM-208ENST00000578600 A0A0G2JLM5 398 aa3.81□□□□□ -1.8
PTPRM-208ENST00000578600 A0A0J9YXY3 114 aa3.81□□□□□ -1.8
PTPRM-208ENST00000578600 LY6LH3BQJ8 138 aa3.81□□□□□ -1.8
PTPRM-208ENST00000578600 I3L521 148 aa3.81□□□□□ -1.8
PTPRM-208ENST00000578600 RAB29O14966 203 aa3.81□□□□□ -1.8
PTPRM-208ENST00000578600 AIREO43918 545 aa3.81□□□□□ -1.8
PTPRM-208ENST00000578600 ZNF737O75373 536 aa3.81□□□□□ -1.8
PTPRM-208ENST00000578600 MMP23AO75900 390 aa3.81□□□□□ -1.8
PTPRM-208ENST00000578600 DHRS3O75911 302 aa3.81□□□□□ -1.8
PTPRM-208ENST00000578600 ZNF682O95780 498 aa3.81□□□□□ -1.8
PTPRM-208ENST00000578600 MOSP00540 346 aa3.81□□□□□ -1.8
PTPRM-208ENST00000578600 CSN2P05814 226 aa3.81□□□□□ -1.8
PTPRM-208ENST00000578600 RPSAP08865 295 aaKnown RBP3.81□□□□□ -1.8
PTPRM-208ENST00000578600 ZNF3P17036 446 aa3.81□□□□□ -1.8
PTPRM-208ENST00000578600 ZBTB25P24278 435 aa3.81□□□□□ -1.8
PTPRM-208ENST00000578600 CDK2P24941 298 aa3.81□□□□□ -1.8
PTPRM-208ENST00000578600 CD1BP29016 333 aa3.81□□□□□ -1.8
PTPRM-208ENST00000578600 MNAT1P51948 309 aa3.81□□□□□ -1.8
PTPRM-208ENST00000578600 TSPAN31Q12999 210 aa3.81□□□□□ -1.8
PTPRM-208ENST00000578600 EDDM3AQ14507 147 aa3.81□□□□□ -1.8
PTPRM-208ENST00000578600 ZNF829Q3KNS6 432 aaPredicted RBP3.81□□□□□ -1.8
PTPRM-208ENST00000578600 Q3ZCU0 254 aa3.81□□□□□ -1.8
PTPRM-208ENST00000578600 CEMP1Q6PRD7 247 aaPredicted RBP3.81□□□□□ -1.8
PTPRM-208ENST00000578600 C10orf99Q6UWK7 81 aa3.81□□□□□ -1.8
PTPRM-208ENST00000578600 BPIFCQ8NFQ6 507 aa3.81□□□□□ -1.8
PTPRM-208ENST00000578600 GNPDA2Q8TDQ7 276 aa3.81□□□□□ -1.8
PTPRM-208ENST00000578600 C7orf33Q8WU49 177 aa3.81□□□□□ -1.8
PTPRM-208ENST00000578600 ASB17Q8WXJ9 295 aa3.81□□□□□ -1.8
PTPRM-208ENST00000578600 RGP1Q92546 391 aaPredicted RBP3.81□□□□□ -1.8
PTPRM-208ENST00000578600 DCUN1D4Q92564 292 aa3.81□□□□□ -1.8
PTPRM-208ENST00000578600 TMED9Q9BVK6 235 aa3.81□□□□□ -1.8
PTPRM-208ENST00000578600 CALYQ9NYX4 217 aa3.81□□□□□ -1.8
PTPRM-208ENST00000578600 COMMD3-BMI1R4GMX3 469 aa3.81□□□□□ -1.8
PTPRM-208ENST00000578600 SACSQ9NZJ4 4579 aa3.8□□□□□ -1.8
PTPRM-208ENST00000578600 KBTBD11-OT1A0A1B0GTJ5 212 aa3.8□□□□□ -1.8
PTPRM-208ENST00000578600 TMEM269A0A1B0GVZ9 245 aa3.8□□□□□ -1.8
PTPRM-208ENST00000578600 TMEM120BA0PK00 339 aa3.8□□□□□ -1.8
PTPRM-208ENST00000578600 GADD45GO95257 159 aa3.8□□□□□ -1.8
PTPRM-208ENST00000578600 HAND1O96004 215 aa3.8□□□□□ -1.8
PTPRM-208ENST00000578600 IGKV1D-33P01593 117 aa3.8□□□□□ -1.8
PTPRM-208ENST00000578600 IGKV1-33P01594 117 aa3.8□□□□□ -1.8
PTPRM-208ENST00000578600 IGLV1-51P01701 117 aa3.8□□□□□ -1.8
PTPRM-208ENST00000578600 GZMHP20718 246 aa3.8□□□□□ -1.8
PTPRM-208ENST00000578600 CD24P25063 80 aa3.8□□□□□ -1.8
PTPRM-208ENST00000578600 NPBWR2P48146 333 aa3.8□□□□□ -1.8
PTPRM-208ENST00000578600 TFPI2P48307 235 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms