RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 C1QL1O75973 258 aa9.04□□□□□ -0.96
SKA2-204ENST00000578519 MT-CO2P00403 227 aa9.04□□□□□ -0.96
SKA2-204ENST00000578519 IGLV1-47P01700 117 aa9.04□□□□□ -0.96
SKA2-204ENST00000578519 HSPB1P04792 205 aaKnown RBP9.04□□□□□ -0.96
SKA2-204ENST00000578519 PRTN3P24158 256 aa9.04□□□□□ -0.96
SKA2-204ENST00000578519 GPX4P36969 197 aaPredicted RBP9.04□□□□□ -0.96
SKA2-204ENST00000578519 OPRK1P41145 380 aa9.04□□□□□ -0.96
SKA2-204ENST00000578519 ETFRF1Q6IPR1 90 aa9.04□□□□□ -0.96
SKA2-204ENST00000578519 TEPPQ6URK8 271 aa9.04□□□□□ -0.96
SKA2-204ENST00000578519 C11orf42Q8N5U0 333 aa9.04□□□□□ -0.96
SKA2-204ENST00000578519 OR11H6Q8NGC7 330 aa9.04□□□□□ -0.96
SKA2-204ENST00000578519 OR10G4Q8NGN3 311 aa9.04□□□□□ -0.96
SKA2-204ENST00000578519 OR10G9Q8NGN4 311 aa9.04□□□□□ -0.96
SKA2-204ENST00000578519 OR10G7Q8NGN6 311 aa9.04□□□□□ -0.96
SKA2-204ENST00000578519 NANPQ8TBE9 248 aa9.04□□□□□ -0.96
SKA2-204ENST00000578519 CACNG8Q8WXS5 425 aa9.04□□□□□ -0.96
SKA2-204ENST00000578519 P2RX4Q99571 388 aa9.04□□□□□ -0.96
SKA2-204ENST00000578519 SPOCK3Q9BQ16 436 aa9.04□□□□□ -0.96
SKA2-204ENST00000578519 NPCDR1Q9BY65 106 aa9.04□□□□□ -0.96
SKA2-204ENST00000578519 TMEM231Q9H6L2 316 aa9.04□□□□□ -0.96
SKA2-204ENST00000578519 RPRMQ9NS64 109 aa9.04□□□□□ -0.96
SKA2-204ENST00000578519 A0A1W2PPV4 95 aa9.03□□□□□ -0.96
SKA2-204ENST00000578519 FOXH1O75593 365 aa9.03□□□□□ -0.96
SKA2-204ENST00000578519 CA2P00918 260 aa9.03□□□□□ -0.96
SKA2-204ENST00000578519 IGKV1-16P04430 117 aa9.03□□□□□ -0.96
SKA2-204ENST00000578519 REG1BP48304 166 aa9.03□□□□□ -0.96
SKA2-204ENST00000578519 FHITP49789 147 aa9.03□□□□□ -0.96
SKA2-204ENST00000578519 LGALS4P56470 323 aa9.03□□□□□ -0.96
SKA2-204ENST00000578519 AKR1C1Q04828 323 aa9.03□□□□□ -0.96
SKA2-204ENST00000578519 SOHLH1Q5JUK2 328 aa9.03□□□□□ -0.96
SKA2-204ENST00000578519 ZNF506Q5JVG8 444 aa9.03□□□□□ -0.96
SKA2-204ENST00000578519 UTF1Q5T230 341 aa9.03□□□□□ -0.96
SKA2-204ENST00000578519 MINOS1Q5TGZ0 78 aa9.03□□□□□ -0.96
SKA2-204ENST00000578519 PNKDQ8N490 385 aa9.03□□□□□ -0.96
SKA2-204ENST00000578519 RNASEH2CQ8TDP1 164 aaKnown RBP9.03□□□□□ -0.96
SKA2-204ENST00000578519 NDUFA4L2Q9NRX3 87 aa9.03□□□□□ -0.96
SKA2-204ENST00000578519 FAM96BQ9Y3D0 163 aa9.03□□□□□ -0.96
SKA2-204ENST00000578519 MINOS1-NBL1R4GNA1 71 aa9.03□□□□□ -0.96
SKA2-204ENST00000578519 AKAP13Q12802 2813 aa9.03□□□□□ -0.96
SKA2-204ENST00000578519 IGHV1-3A0A0C4DH29 117 aa9.02□□□□□ -0.97
SKA2-204ENST00000578519 MAP1LC3B2A6NCE7 125 aa9.02□□□□□ -0.97
SKA2-204ENST00000578519 SRRM4A7MD48 611 aaKnown RBP9.02□□□□□ -0.97
SKA2-204ENST00000578519 CORTO00230 105 aa9.02□□□□□ -0.97
SKA2-204ENST00000578519 RRHO14718 337 aa9.02□□□□□ -0.97
SKA2-204ENST00000578519 MDKP21741 143 aaPredicted RBP9.02□□□□□ -0.97
SKA2-204ENST00000578519 COX7A1P24310 79 aa9.02□□□□□ -0.97
SKA2-204ENST00000578519 CDKN1AP38936 164 aa9.02□□□□□ -0.97
SKA2-204ENST00000578519 PSMB3P49720 205 aa9.02□□□□□ -0.97
SKA2-204ENST00000578519 ELLP55199 621 aaPredicted RBP9.02□□□□□ -0.97
SKA2-204ENST00000578519 ARF6P62330 175 aa9.02□□□□□ -0.97
SKA2-204ENST00000578519 BTN1A1Q13410 526 aa9.02□□□□□ -0.97
SKA2-204ENST00000578519 TPTE2P1Q5T6R2 138 aa9.02□□□□□ -0.97
SKA2-204ENST00000578519 SPSB3Q6PJ21 355 aa9.02□□□□□ -0.97
SKA2-204ENST00000578519 C22orf15Q8WYQ4 148 aa9.02□□□□□ -0.97
SKA2-204ENST00000578519 SLC35E1Q96K37 410 aa9.02□□□□□ -0.97
SKA2-204ENST00000578519 SRSF8Q9BRL6 282 aaKnown RBP9.02□□□□□ -0.97
SKA2-204ENST00000578519 C19orf24Q9BVV8 132 aa9.02□□□□□ -0.97
SKA2-204ENST00000578519 MAP1LC3BQ9GZQ8 125 aa9.02□□□□□ -0.97
SKA2-204ENST00000578519 MANBALQ9NQG1 85 aa9.02□□□□□ -0.97
SKA2-204ENST00000578519 VAX2Q9UIW0 290 aa9.02□□□□□ -0.97
SKA2-204ENST00000578519 DMXL1Q9Y485 3027 aa9.01□□□□□ -0.97
SKA2-204ENST00000578519 NDUFS8O00217 210 aa9.01□□□□□ -0.97
SKA2-204ENST00000578519 RPL27AP46776 148 aaKnown RBP9.01□□□□□ -0.97
SKA2-204ENST00000578519 RPL29P47914 159 aaKnown RBP9.01□□□□□ -0.97
SKA2-204ENST00000578519 CDC34P49427 236 aaPredicted RBP9.01□□□□□ -0.97
SKA2-204ENST00000578519 SRSF3P84103 164 aaKnown RBP9.01□□□□□ -0.97
SKA2-204ENST00000578519 HNF4GQ14541 408 aa9.01□□□□□ -0.97
SKA2-204ENST00000578519 TMEM249Q2WGJ8 235 aa9.01□□□□□ -0.97
SKA2-204ENST00000578519 LCN15Q6UWW0 184 aa9.01□□□□□ -0.97
SKA2-204ENST00000578519 TMEM144Q7Z5S9 345 aa9.01□□□□□ -0.97
SKA2-204ENST00000578519 RCC1LQ96I51 464 aaKnown RBP9.01□□□□□ -0.97
SKA2-204ENST00000578519 RNF2Q99496 336 aa9.01□□□□□ -0.97
SKA2-204ENST00000578519 TXNDC17Q9BRA2 123 aa9.01□□□□□ -0.97
SKA2-204ENST00000578519 RP1L1Q8IWN7 2480 aaPredicted RBP9□□□□□ -0.97
SKA2-204ENST00000578519 A0A1B0GV50 99 aa9□□□□□ -0.97
SKA2-204ENST00000578519 C22orf46C9J442 243 aa9□□□□□ -0.97
SKA2-204ENST00000578519 LY6LH3BQJ8 138 aa9□□□□□ -0.97
SKA2-204ENST00000578519 OVOL3O00110 214 aa9□□□□□ -0.97
SKA2-204ENST00000578519 SLC25A17O43808 307 aa9□□□□□ -0.97
SKA2-204ENST00000578519 IGHV2-5P01817 119 aa9□□□□□ -0.97
SKA2-204ENST00000578519 SNRNP70P08621 437 aaKnown RBP9□□□□□ -0.97
SKA2-204ENST00000578519 DSCR9P59020 149 aa9□□□□□ -0.97
SKA2-204ENST00000578519 PLGLAQ15195 96 aa9□□□□□ -0.97
SKA2-204ENST00000578519 HAGHQ16775 308 aa9□□□□□ -0.97
SKA2-204ENST00000578519 FAM122CQ6P4D5 195 aa9□□□□□ -0.97
SKA2-204ENST00000578519 TREML4Q6UXN2 200 aa9□□□□□ -0.97
SKA2-204ENST00000578519 SLC35E3Q7Z769 313 aa9□□□□□ -0.97
SKA2-204ENST00000578519 CLRN3Q8NCR9 226 aa9□□□□□ -0.97
SKA2-204ENST00000578519 OR4P4Q8NGL7 312 aa9□□□□□ -0.97
SKA2-204ENST00000578519 OR1L6Q8NGR2 347 aa9□□□□□ -0.97
SKA2-204ENST00000578519 CLDND2Q8NHS1 167 aa9□□□□□ -0.97
SKA2-204ENST00000578519 CCL19Q99731 98 aa9□□□□□ -0.97
SKA2-204ENST00000578519 PIMREGQ9BSJ6 248 aa9□□□□□ -0.97
SKA2-204ENST00000578519 LPAR2Q9HBW0 351 aa9□□□□□ -0.97
SKA2-204ENST00000578519 ZNRD1Q9P1U0 126 aa9□□□□□ -0.97
SKA2-204ENST00000578519 GNG13Q9P2W3 67 aa9□□□□□ -0.97
SKA2-204ENST00000578519 PRELID1Q9Y255 219 aa9□□□□□ -0.97
SKA2-204ENST00000578519 TBL2Q9Y4P3 447 aaKnown RBP9□□□□□ -0.97
SKA2-204ENST00000578519 PLCE1Q9P212 2302 aa9□□□□□ -0.97
SKA2-204ENST00000578519 ANKRD11Q6UB99 2663 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms