RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 UQCR10Q9UDW1 63 aa1.5□□□□□ -2.17
PTP4A1-204ENST00000578299 MRM2Q9UI43 246 aaKnown RBP1.5□□□□□ -2.17
PTP4A1-204ENST00000578299 TBX21Q9UL17 535 aa1.5□□□□□ -2.17
PTP4A1-204ENST00000578299 ANAPC10Q9UM13 185 aa1.5□□□□□ -2.17
PTP4A1-204ENST00000578299 C14orf166Q9Y224 244 aaKnown RBP1.5□□□□□ -2.17
PTP4A1-204ENST00000578299 ZNF443Q9Y2A4 671 aaPredicted RBP1.5□□□□□ -2.17
PTP4A1-204ENST00000578299 LAMTOR2Q9Y2Q5 125 aa1.5□□□□□ -2.17
PTP4A1-204ENST00000578299 MEMO1Q9Y316 297 aa1.5□□□□□ -2.17
PTP4A1-204ENST00000578299 RHBDD3Q9Y3P4 386 aa1.5□□□□□ -2.17
PTP4A1-204ENST00000578299 LSM5Q9Y4Y9 91 aaKnown RBP1.5□□□□□ -2.17
PTP4A1-204ENST00000578299 WSB1Q9Y6I7 421 aa1.5□□□□□ -2.17
PTP4A1-204ENST00000578299 CHD3Q12873 2000 aaKnown RBP1.5□□□□□ -2.17
PTP4A1-204ENST00000578299 EML5Q05BV3 1969 aa1.5□□□□□ -2.17
PTP4A1-204ENST00000578299 VWA8A3KMH1 1905 aa1.5□□□□□ -2.17
PTP4A1-204ENST00000578299 TICRRQ7Z2Z1 1910 aa1.5□□□□□ -2.17
PTP4A1-204ENST00000578299 GON4LQ3T8J9 2241 aa1.5□□□□□ -2.17
PTP4A1-204ENST00000578299 KIAA1549LQ6ZVL6 1849 aa1.5□□□□□ -2.17
PTP4A1-204ENST00000578299 PAPPA2Q9BXP8 1791 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 MDC1Q14676 2089 aaKnown RBP1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 COL4A2P08572 1712 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 TRAV26-1A0A087WT03 109 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 NSG1A0A0A6YYJ2 146 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 BORCS7-ASMTA0A0B4J1R7 106 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 A0A0D9SEW6 157 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 IGHV1-69-2A0A0G2JMI3 117 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 A0A1B0GV72 72 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 A0A1B0GWB2 263 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 A0A1W2PNV4 684 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 IGLC7A0M8Q6 106 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 IGSF23A1L1A6 192 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 GRIFINA4D1Z8 144 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 PINLYPA6NC86 204 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 OR2T8A6NH00 312 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 CEACAM18A8MTB9 384 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 H7BYZ3 331 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 CLDN34H7C241 214 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 K7ERU9 68 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 PLPP1O14494 284 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 RBFOX2O43251 390 aaKnown RBP eCLIP1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 HCRTR1O43613 425 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 ZNF861PO60384 105 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 TBX19O60806 448 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 RAMP3O60896 148 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 DNAJB6O75190 326 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 PITX3O75364 302 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 UPK3AO75631 287 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 TNFSF15O95150 251 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 MPZL1O95297 269 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 BRI3O95415 125 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 CDS2O95674 445 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 TYMSP04818 313 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 LGALS2P05162 132 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 HPNP05981 417 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 CRYGCP07315 174 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 PFN1P07737 140 aaKnown RBP1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 OR4Q2P0C623 313 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 BCL2P10415 239 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 ESDP10768 282 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 SCGB1A1P11684 91 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 KCNE1P15382 129 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 HIST1H1CP16403 213 aaKnown RBP1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 ZNF43P17038 809 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 PGCP20142 388 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 RPS4Y1P22090 263 aaKnown RBP1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 IL3RAP26951 378 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 ATP6V0CP27449 155 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 PSMB5P28074 263 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 TSPOP30536 169 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 GNRHRP30968 328 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 GABRA3P34903 492 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 CEACAM3P40198 252 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 GPR6P46095 362 aaPredicted RBP1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 GALR1P47211 349 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 RAB9AP51151 201 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 CLDN6P56747 220 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 TPPP2P59282 170 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 TAS2R30P59541 319 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 PPP1CBP62140 327 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 RAB11AP62491 216 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 FKBP1AP62942 108 aaKnown RBP1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 RUNX1Q01196 453 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 EWSR1Q01844 656 aaKnown RBP eCLIP1.49□□□□□ -2.172e-7■■■■■ 30.5
PTP4A1-204ENST00000578299 ZNF117Q03924 483 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 ZNF92Q03936 586 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 SLAQ13239 276 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 UNC119Q13432 240 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 FZD2Q14332 565 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 VAMP3Q15836 100 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 ADIRFQ15847 76 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 CLEC12BQ2HXU8 276 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 IAH1Q2TAA2 248 aaPredicted RBP1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 TRMT12Q53H54 448 aaKnown RBP1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 VAX1Q5SQQ9 334 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 ZNF684Q5T5D7 378 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 LINC01590Q5TEZ4 76 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 GPR157Q5UAW9 335 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 FAM78BQ5VT40 261 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 TMEM225Q6GV28 225 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 AGTRAPQ6RW13 159 aa1.49□□□□□ -2.17
PTP4A1-204ENST00000578299 Q6ZN92 141 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms