RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 ZCCHC24Q8N2G6 241 aaKnown RBP2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 TMEM86AQ8N2M4 240 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 FTMTQ8N4E7 242 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 TMEM229BQ8NBD8 167 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 ZNF740Q8NDX6 193 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 OR6K6Q8NGW6 343 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 SLC37A2Q8TED4 501 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 DOK4Q8TEW6 326 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 DYNLL2Q96FJ2 89 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 BMFQ96LC9 184 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 DERL3Q96Q80 235 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 OR4C12Q96R67 309 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 MCHR1Q99705 422 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 COA1Q9GZY4 146 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 TMEM222Q9H0R3 208 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 POLR2J3Q9H1A7 115 aaKnown RBP2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 MED28Q9H204 178 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 OR2D2Q9H210 308 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 OR52D1Q9H346 318 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 ACER3Q9NUN7 267 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 ZNF586Q9NXT0 402 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 CYSLTR1Q9Y271 337 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 MRPS16Q9Y3D3 137 aaKnown RBP2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 INSIG2Q9Y5U4 225 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 PLXND1Q9Y4D7 1925 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 ECM29Q5VYK3 1845 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 TARBP1Q13395 1621 aaKnown RBP2.28□□□□□ -2.05
SMCHD1-202ENST00000577300 PREX2Q70Z35 1606 aa2.28□□□□□ -2.05
SMCHD1-202ENST00000577300 EIF4G3O43432 1585 aaKnown RBP2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 REREQ9P2R6 1566 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 LAMC3Q9Y6N6 1575 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 DCCP43146 1447 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 ANKARQ7Z5J8 1434 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 COL5A1P20908 1838 aaPredicted RBP2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 IGHV1-69-2A0A0G2JMI3 117 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 ZNF816-ZNF321PA0A0X1KG74 233 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 hADV38S2A0JD32 116 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 TSPAN11A1L157 253 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 C7orf77A4D0Y5 90 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 TMEM212A6NML5 194 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 B4DEV8 164 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 H3BTX0 84 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 H7C1C5 153 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 GABRPO00591 440 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 NME4O00746 187 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 YPEL1O60688 119 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 SOX14O95416 240 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 OR2H2O95918 312 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 HLA-DQB1P01920 261 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 HBE1P02100 147 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 TTRP02766 147 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 MMP7P09237 267 aaPredicted RBP2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 SPINK8P0C7L1 97 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 TRGC1P0CF51 173 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 IGLC6P0CF74 106 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 GABRG2P18507 467 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 GALR1P47211 349 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 UBE2E1P51965 193 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 CRISP3P54108 245 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 KRTAP12-4P60329 112 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 GABARAPL2P60520 117 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 YPEL3P61236 119 aaPredicted RBP2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 MRPS6P82932 125 aaKnown RBP2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 PSG9Q00887 426 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 MYL5Q02045 173 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 SRYQ05066 204 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 ATXN7L3Q14CW9 347 aaPredicted RBP2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 PMVKQ15126 192 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 SLC25A35Q3KQZ1 300 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 MEIG1Q5JSS6 88 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 PAGE3Q5JUK9 113 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 HBMQ6B0K9 141 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 OR2T5Q6IEZ7 315 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 OR2T2Q6IF00 324 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 TEX43Q6ZNM6 134 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 GOLT1AQ6ZVE7 132 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 TMEM183AQ8IXX5 376 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 C1orf158Q8N1D5 194 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 TTC9CQ8N5M4 171 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 KRTCAP2Q8N6L1 136 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 OR2T33Q8NG76 320 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 OR11H6Q8NGC7 330 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 OR51A4Q8NGJ6 313 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 OR51A2Q8NGJ7 313 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 OR5AR1Q8NGP9 310 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 OR2T29Q8NH02 315 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 MBD3L1Q8WWY6 194 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 RXFP2Q8WXD0 754 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 CHCHD10Q8WYQ3 142 aaPredicted RBP2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 UBE2E3Q969T4 207 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 ZC2HC1AQ96GY0 325 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 UBE2E2Q96LR5 201 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 YPEL2Q96QA6 119 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 OR4K3Q96R72 315 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 SDF2Q99470 211 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 SPIN2AQ99865 258 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 SPIN2BQ9BPZ2 258 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 PDCD1LG2Q9BQ51 273 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 PRADC1Q9BSG0 188 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 SPANXCQ9NY87 97 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms