RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 KCNK7Q9Y2U2 307 aa4.74□□□□□ -1.65
NUP88-212ENST00000576708 IGKV1D-8A0A087WSZ0 117 aa4.73□□□□□ -1.65
NUP88-212ENST00000576708 C13orf42A0A1B0GVH6 325 aa4.73□□□□□ -1.65
NUP88-212ENST00000576708 SMIM30A4D0T7 59 aa4.73□□□□□ -1.65
NUP88-212ENST00000576708 IZUMO1RA6ND01 250 aa4.73□□□□□ -1.65
NUP88-212ENST00000576708 HMX3A6NHT5 357 aa4.73□□□□□ -1.65
NUP88-212ENST00000576708 FABP7O15540 132 aa4.73□□□□□ -1.65
NUP88-212ENST00000576708 DENRO43583 198 aaKnown RBP4.73□□□□□ -1.65
NUP88-212ENST00000576708 IGLV1-51P01701 117 aa4.73□□□□□ -1.65
NUP88-212ENST00000576708 APOA2P02652 100 aa4.73□□□□□ -1.65
NUP88-212ENST00000576708 PRH1P02810 166 aa4.73□□□□□ -1.65
NUP88-212ENST00000576708 FCGR3AP08637 254 aa4.73□□□□□ -1.65
NUP88-212ENST00000576708 LYL1P12980 280 aa4.73□□□□□ -1.65
NUP88-212ENST00000576708 GNB3P16520 340 aa4.73□□□□□ -1.65
NUP88-212ENST00000576708 SYNJ2BPP57105 145 aa4.73□□□□□ -1.65
NUP88-212ENST00000576708 TSPAN5P62079 268 aa4.73□□□□□ -1.65
NUP88-212ENST00000576708 KLF5Q13887 457 aaPredicted RBP4.73□□□□□ -1.65
NUP88-212ENST00000576708 FAM90A2PQ658T7 463 aa4.73□□□□□ -1.65
NUP88-212ENST00000576708 PYHIN1Q6K0P9 492 aa4.73□□□□□ -1.65
NUP88-212ENST00000576708 CADM3Q8N126 398 aa4.73□□□□□ -1.65
NUP88-212ENST00000576708 OR56B1Q8NGI3 324 aa4.73□□□□□ -1.65
NUP88-212ENST00000576708 OR4A4PQ8NGN8 299 aa4.73□□□□□ -1.65
NUP88-212ENST00000576708 HARBI1Q96MB7 349 aa4.73□□□□□ -1.65
NUP88-212ENST00000576708 TMEM68Q96MH6 324 aa4.73□□□□□ -1.65
NUP88-212ENST00000576708 TM2D3Q9BRN9 247 aa4.73□□□□□ -1.65
NUP88-212ENST00000576708 ELOVL1Q9BW60 279 aa4.73□□□□□ -1.65
NUP88-212ENST00000576708 SLA2Q9H6Q3 261 aa4.73□□□□□ -1.65
NUP88-212ENST00000576708 RANGRFQ9HD47 186 aaPredicted RBP4.73□□□□□ -1.65
NUP88-212ENST00000576708 STUB1Q9UNE7 303 aa4.73□□□□□ -1.65
NUP88-212ENST00000576708 TPRKBQ9Y3C4 175 aa4.73□□□□□ -1.65
NUP88-212ENST00000576708 SELENOKQ9Y6D0 94 aa4.73□□□□□ -1.65
NUP88-212ENST00000576708 COX11Q9Y6N1 276 aa4.73□□□□□ -1.65
NUP88-212ENST00000576708 V9GY05 133 aa4.73□□□□□ -1.65
NUP88-212ENST00000576708 BIRC6Q9NR09 4857 aa4.73□□□□□ -1.65
NUP88-212ENST00000576708 TENM2Q9NT68 2774 aa4.73□□□□□ -1.65
NUP88-212ENST00000576708 DNAH1Q9P2D7 4330 aa4.73□□□□□ -1.65
NUP88-212ENST00000576708 HYDINQ4G0P3 5121 aa4.72□□□□□ -1.65
NUP88-212ENST00000576708 TRBV6-7A0A0A0MS04 114 aa4.72□□□□□ -1.65
NUP88-212ENST00000576708 LOC105371267A0A1B0GV96 52 aa4.72□□□□□ -1.65
NUP88-212ENST00000576708 C5orf51A6NDU8 294 aa4.72□□□□□ -1.65
NUP88-212ENST00000576708 MSGN1A6NI15 193 aa4.72□□□□□ -1.65
NUP88-212ENST00000576708 H0Y8G0 127 aa4.72□□□□□ -1.65
NUP88-212ENST00000576708 MFNGO00587 321 aa4.72□□□□□ -1.65
NUP88-212ENST00000576708 ARL6IP5O75915 188 aa4.72□□□□□ -1.65
NUP88-212ENST00000576708 MBPP02686 304 aaPredicted RBP4.72□□□□□ -1.65
NUP88-212ENST00000576708 CSN3P07498 182 aa4.72□□□□□ -1.65
NUP88-212ENST00000576708 ZNF735P0CB33 412 aa4.72□□□□□ -1.65
NUP88-212ENST00000576708 EDN2P20800 178 aa4.72□□□□□ -1.65
NUP88-212ENST00000576708 CD40LGP29965 261 aa4.72□□□□□ -1.65
NUP88-212ENST00000576708 CDKN1BP46527 198 aa4.72□□□□□ -1.65
NUP88-212ENST00000576708 MLLT11Q13015 90 aaPredicted RBP4.72□□□□□ -1.65
NUP88-212ENST00000576708 SSX1Q16384 188 aa4.72□□□□□ -1.65
NUP88-212ENST00000576708 TNXAQ16473 311 aa4.72□□□□□ -1.65
NUP88-212ENST00000576708 IDO2Q6ZQW0 420 aa4.72□□□□□ -1.65
NUP88-212ENST00000576708 C19orf35Q6ZS72 473 aa4.72□□□□□ -1.65
NUP88-212ENST00000576708 SLC24A4Q8NFF2 622 aa4.72□□□□□ -1.65
NUP88-212ENST00000576708 OR9G4Q8NGQ1 327 aa4.72□□□□□ -1.65
NUP88-212ENST00000576708 OR10J5Q8NHC4 309 aa4.72□□□□□ -1.65
NUP88-212ENST00000576708 DDB2Q92466 427 aa4.72□□□□□ -1.65
NUP88-212ENST00000576708 RAB3CQ96E17 227 aa4.72□□□□□ -1.65
NUP88-212ENST00000576708 MGLLQ99685 303 aa4.72□□□□□ -1.65
NUP88-212ENST00000576708 CABLES2Q9BTV7 478 aa4.72□□□□□ -1.65
NUP88-212ENST00000576708 VCXQ9H320 206 aa4.72□□□□□ -1.65
NUP88-212ENST00000576708 EDA2RQ9HAV5 297 aa4.72□□□□□ -1.65
NUP88-212ENST00000576708 RETNQ9HD89 108 aa4.72□□□□□ -1.65
NUP88-212ENST00000576708 COA4Q9NYJ1 87 aa4.72□□□□□ -1.65
NUP88-212ENST00000576708 RAB22AQ9UL26 194 aa4.72□□□□□ -1.65
NUP88-212ENST00000576708 MGAT4AQ9UM21 535 aa4.72□□□□□ -1.65
NUP88-212ENST00000576708 STAB2Q8WWQ8 2551 aa4.71□□□□□ -1.65
NUP88-212ENST00000576708 PLECQ15149 4684 aaKnown RBP4.71□□□□□ -1.66
NUP88-212ENST00000576708 H3BUA1 57 aa4.71□□□□□ -1.66
NUP88-212ENST00000576708 CRYZL1O95825 349 aa4.71□□□□□ -1.66
NUP88-212ENST00000576708 ZP3P21754 424 aa4.71□□□□□ -1.66
NUP88-212ENST00000576708 CRHBPP24387 322 aa4.71□□□□□ -1.66
NUP88-212ENST00000576708 DUTP33316 252 aaKnown RBP4.71□□□□□ -1.66
NUP88-212ENST00000576708 RANBP1P43487 201 aa4.71□□□□□ -1.66
NUP88-212ENST00000576708 LGALS7P47929 136 aa4.71□□□□□ -1.66
NUP88-212ENST00000576708 SERPINB10P48595 397 aa4.71□□□□□ -1.66
NUP88-212ENST00000576708 HSPA13P48723 471 aa4.71□□□□□ -1.66
NUP88-212ENST00000576708 RPL30P62888 115 aaKnown RBP4.71□□□□□ -1.66
NUP88-212ENST00000576708 ZNF45Q02386 682 aa4.71□□□□□ -1.66
NUP88-212ENST00000576708 ARFRP1Q13795 201 aa4.71□□□□□ -1.66
NUP88-212ENST00000576708 TRAM1Q15629 374 aa4.71□□□□□ -1.66
NUP88-212ENST00000576708 PRSS8Q16651 343 aa4.71□□□□□ -1.66
NUP88-212ENST00000576708 HAGHQ16775 308 aa4.71□□□□□ -1.66
NUP88-212ENST00000576708 RGS21Q2M5E4 152 aa4.71□□□□□ -1.66
NUP88-212ENST00000576708 OR2B11Q5JQS5 317 aa4.71□□□□□ -1.66
NUP88-212ENST00000576708 C10orf55Q5SWW7 151 aa4.71□□□□□ -1.66
NUP88-212ENST00000576708 ETFRF1Q6IPR1 90 aa4.71□□□□□ -1.66
NUP88-212ENST00000576708 ZNF343Q6P1L6 599 aa4.71□□□□□ -1.66
NUP88-212ENST00000576708 ADAMTSL5Q6ZMM2 481 aa4.71□□□□□ -1.66
NUP88-212ENST00000576708 NR2C2APQ86WQ0 139 aa4.71□□□□□ -1.66
NUP88-212ENST00000576708 SGPP2Q8IWX5 399 aa4.71□□□□□ -1.66
NUP88-212ENST00000576708 H1FOOQ8IZA3 346 aaPredicted RBP4.71□□□□□ -1.66
NUP88-212ENST00000576708 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.71□□□□□ -1.66
NUP88-212ENST00000576708 ADAD2Q8NCV1 583 aaKnown RBP4.71□□□□□ -1.66
NUP88-212ENST00000576708 OR10R2Q8NGX6 335 aa4.71□□□□□ -1.66
NUP88-212ENST00000576708 ENKURQ8TC29 256 aa4.71□□□□□ -1.66
NUP88-212ENST00000576708 NTN5Q8WTR8 489 aaPredicted RBP4.71□□□□□ -1.66
NUP88-212ENST00000576708 GLMPQ8WWB7 406 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms