RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 PRSS54Q6PEW0 395 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 TEX261Q6UWH6 196 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 C18orf65Q6ZTR6 163 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 TMUB2Q71RG4 321 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 THNSL2Q86YJ6 484 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 SELENOHQ8IZQ5 122 aaKnown RBP6.24□□□□□ -1.41
CCDC40-215ENST00000576033 Q8N2B8 174 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 C3orf56Q8N813 242 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 ZBTB34Q8NCN2 500 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 WIPF2Q8TF74 440 aaPredicted RBP6.24□□□□□ -1.41
CCDC40-215ENST00000576033 SEC22AQ96IW7 307 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 FAM103A1Q9BTL3 118 aaKnown RBP6.24□□□□□ -1.41
CCDC40-215ENST00000576033 PDCD10Q9BUL8 212 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 MFFQ9GZY8 342 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 C11orf1Q9H5F2 150 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 FAM212BQ9NTI7 297 aaPredicted RBP6.24□□□□□ -1.41
CCDC40-215ENST00000576033 SLC35D1Q9NTN3 355 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 MBD2Q9UBB5 411 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 WASHC3Q9Y3C0 194 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 TMED3Q9Y3Q3 217 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 U3KQ87 197 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 TET2Q6N021 2002 aaPredicted RBP6.24□□□□□ -1.41
CCDC40-215ENST00000576033 DNAH3Q8TD57 4116 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 A0A0D9SG52 128 aa6.23□□□□□ -1.41
CCDC40-215ENST00000576033 C5orf51A6NDU8 294 aa6.23□□□□□ -1.41
CCDC40-215ENST00000576033 NBR2O15453 112 aa6.23□□□□□ -1.41
CCDC40-215ENST00000576033 SLC25A17O43808 307 aa6.23□□□□□ -1.41
CCDC40-215ENST00000576033 FCGR3BO75015 233 aa6.23□□□□□ -1.41
CCDC40-215ENST00000576033 CRYZL1O95825 349 aa6.23□□□□□ -1.41
CCDC40-215ENST00000576033 TSPAN15O95858 294 aa6.23□□□□□ -1.41
CCDC40-215ENST00000576033 HOXB5P09067 269 aa6.23□□□□□ -1.41
CCDC40-215ENST00000576033 SLC25A6P12236 298 aa6.23□□□□□ -1.41
CCDC40-215ENST00000576033 NDUFA5Q16718 116 aa6.23□□□□□ -1.41
CCDC40-215ENST00000576033 IAH1Q2TAA2 248 aaPredicted RBP6.23□□□□□ -1.41
CCDC40-215ENST00000576033 C10orf55Q5SWW7 151 aa6.23□□□□□ -1.41
CCDC40-215ENST00000576033 C19orf35Q6ZS72 473 aa6.23□□□□□ -1.41
CCDC40-215ENST00000576033 ACOT7LQ6ZUV0 252 aa6.23□□□□□ -1.41
CCDC40-215ENST00000576033 ZNF329Q86UD4 541 aa6.23□□□□□ -1.41
CCDC40-215ENST00000576033 ZNF546Q86UE3 836 aa6.23□□□□□ -1.41
CCDC40-215ENST00000576033 CMTM1Q8IZ96 169 aa6.23□□□□□ -1.41
CCDC40-215ENST00000576033 SLC35G3Q8N808 338 aa6.23□□□□□ -1.41
CCDC40-215ENST00000576033 ZNF680Q8NEM1 530 aa6.23□□□□□ -1.41
CCDC40-215ENST00000576033 OR4D5Q8NGN0 318 aa6.23□□□□□ -1.41
CCDC40-215ENST00000576033 OR51H1Q8NH63 302 aa6.23□□□□□ -1.41
CCDC40-215ENST00000576033 OR2T6Q8NHC8 308 aa6.23□□□□□ -1.41
CCDC40-215ENST00000576033 TCTEX1D2Q8WW35 142 aa6.23□□□□□ -1.41
CCDC40-215ENST00000576033 AQP10Q96PS8 301 aa6.23□□□□□ -1.41
CCDC40-215ENST00000576033 CITED1Q99966 193 aa6.23□□□□□ -1.41
CCDC40-215ENST00000576033 ZNF747Q9BV97 191 aa6.23□□□□□ -1.41
CCDC40-215ENST00000576033 PRSS22Q9GZN4 317 aa6.23□□□□□ -1.41
CCDC40-215ENST00000576033 PARP11Q9NR21 331 aa6.23□□□□□ -1.41
CCDC40-215ENST00000576033 COMMD9Q9P000 198 aa6.23□□□□□ -1.41
CCDC40-215ENST00000576033 MMP24Q9Y5R2 645 aa6.23□□□□□ -1.41
CCDC40-215ENST00000576033 FBN3Q75N90 2809 aa6.22□□□□□ -1.41
CCDC40-215ENST00000576033 IGHV7-81A0A0B4J1V7 117 aa6.22□□□□□ -1.41
CCDC40-215ENST00000576033 PIGBOS1A0A0B4J2F0 54 aa6.22□□□□□ -1.41
CCDC40-215ENST00000576033 C13orf42A0A1B0GVH6 325 aa6.22□□□□□ -1.41
CCDC40-215ENST00000576033 RPS10-NUDT3A0A1W2PQS6 291 aa6.22□□□□□ -1.41
CCDC40-215ENST00000576033 A0A1W2PRX2 142 aa6.22□□□□□ -1.41
CCDC40-215ENST00000576033 ADARB2-AS1A8MUL3 147 aa6.22□□□□□ -1.41
CCDC40-215ENST00000576033 FAM25EA8MYX2 175 aa6.22□□□□□ -1.41
CCDC40-215ENST00000576033 G3V318 75 aa6.22□□□□□ -1.41
CCDC40-215ENST00000576033 ATP6V0E1O15342 81 aa6.22□□□□□ -1.41
CCDC40-215ENST00000576033 ATP6V1G1O75348 118 aa6.22□□□□□ -1.41
CCDC40-215ENST00000576033 PITX3O75364 302 aa6.22□□□□□ -1.41
CCDC40-215ENST00000576033 DEDDO75618 318 aa6.22□□□□□ -1.41
CCDC40-215ENST00000576033 NDUFA3O95167 84 aa6.22□□□□□ -1.41
CCDC40-215ENST00000576033 CFDP00746 253 aaPredicted RBP6.22□□□□□ -1.41
CCDC40-215ENST00000576033 CA2P00918 260 aa6.22□□□□□ -1.41
CCDC40-215ENST00000576033 IFNA21P01568 189 aa6.22□□□□□ -1.41
CCDC40-215ENST00000576033 APOA2P02652 100 aa6.22□□□□□ -1.41
CCDC40-215ENST00000576033 APELAP0DMC3 54 aa6.22□□□□□ -1.41
CCDC40-215ENST00000576033 VDAC1P21796 283 aa6.22□□□□□ -1.41
CCDC40-215ENST00000576033 RPL15P61313 204 aaKnown RBP6.22□□□□□ -1.41
CCDC40-215ENST00000576033 RPS16P62249 146 aaKnown RBP6.22□□□□□ -1.41
CCDC40-215ENST00000576033 GNB1P62873 340 aa6.22□□□□□ -1.41
CCDC40-215ENST00000576033 RAB32Q13637 225 aa6.22□□□□□ -1.41
CCDC40-215ENST00000576033 PSG5Q15238 335 aa6.22□□□□□ -1.41
CCDC40-215ENST00000576033 C5orf64Q2M2E5 130 aa6.22□□□□□ -1.41
CCDC40-215ENST00000576033 ZNF585BQ52M93 769 aa6.22□□□□□ -1.41
CCDC40-215ENST00000576033 SSX9Q7RTT3 188 aa6.22□□□□□ -1.41
CCDC40-215ENST00000576033 C16orf82Q7Z2V1 217 aa6.22□□□□□ -1.41
CCDC40-215ENST00000576033 LYZL2Q7Z4W2 148 aa6.22□□□□□ -1.41
CCDC40-215ENST00000576033 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.22□□□□□ -1.41
CCDC40-215ENST00000576033 OR1S1Q8NH92 325 aa6.22□□□□□ -1.41
CCDC40-215ENST00000576033 THAP6Q8TBB0 222 aa6.22□□□□□ -1.41
CCDC40-215ENST00000576033 RBPMSQ93062 196 aaKnown RBP6.22□□□□□ -1.41
CCDC40-215ENST00000576033 RRNAD1Q96FB5 475 aaKnown RBP6.22□□□□□ -1.41
CCDC40-215ENST00000576033 HARBI1Q96MB7 349 aa6.22□□□□□ -1.41
CCDC40-215ENST00000576033 CITED2Q99967 270 aaPredicted RBP6.22□□□□□ -1.41
CCDC40-215ENST00000576033 WNT10AQ9GZT5 417 aa6.22□□□□□ -1.41
CCDC40-215ENST00000576033 OR5AC2Q9NZP5 309 aa6.22□□□□□ -1.41
CCDC40-215ENST00000576033 METTL1Q9UBP6 276 aaKnown RBP6.22□□□□□ -1.41
CCDC40-215ENST00000576033 WSB1Q9Y6I7 421 aa6.22□□□□□ -1.41
CCDC40-215ENST00000576033 WNK1Q9H4A3 2382 aa6.21□□□□□ -1.42
CCDC40-215ENST00000576033 MGAM2Q2M2H8 2515 aa6.21□□□□□ -1.42
CCDC40-215ENST00000576033 MEGF8Q7Z7M0 2845 aa6.21□□□□□ -1.42
CCDC40-215ENST00000576033 TRAV3A0A0B4J244 114 aa6.21□□□□□ -1.42
CCDC40-215ENST00000576033 K7EPK0 472 aa6.21□□□□□ -1.42
CCDC40-215ENST00000576033 RRHO14718 337 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms