RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 ZNF680Q8NEM1 530 aa19.19■□□□□ 0.66
ATPAF1-213ENST00000574428 NPBQ8NG41 125 aa19.19■□□□□ 0.66
ATPAF1-213ENST00000574428 TMEM167AQ8TBQ9 72 aa19.19■□□□□ 0.66
ATPAF1-213ENST00000574428 ZDHHC16Q969W1 377 aa19.19■□□□□ 0.66
ATPAF1-213ENST00000574428 SIGLEC9Q9Y336 463 aa19.19■□□□□ 0.66
ATPAF1-213ENST00000574428 C15orf61A6NNL5 157 aa19.18■□□□□ 0.66
ATPAF1-213ENST00000574428 IGHV4-59P01825 116 aa19.18■□□□□ 0.66
ATPAF1-213ENST00000574428 AP2S1P53680 142 aaPredicted RBP19.18■□□□□ 0.66
ATPAF1-213ENST00000574428 PLGLAQ15195 96 aa19.18■□□□□ 0.66
ATPAF1-213ENST00000574428 LY6EQ16553 131 aa19.18■□□□□ 0.66
ATPAF1-213ENST00000574428 AANATQ16613 207 aa19.18■□□□□ 0.66
ATPAF1-213ENST00000574428 CLCC1Q96S66 551 aa19.18■□□□□ 0.66
ATPAF1-213ENST00000574428 MAGT1Q9H0U3 335 aa19.18■□□□□ 0.66
ATPAF1-213ENST00000574428 GSX1Q9H4S2 264 aaPredicted RBP19.18■□□□□ 0.66
ATPAF1-213ENST00000574428 ZNF430Q9H8G1 570 aaPredicted RBP19.18■□□□□ 0.66
ATPAF1-213ENST00000574428 TMEM160Q9NX00 188 aa19.18■□□□□ 0.66
ATPAF1-213ENST00000574428 KIAA1456Q9P272 454 aa19.18■□□□□ 0.66
ATPAF1-213ENST00000574428 RNF222A6NCQ9 220 aa19.17■□□□□ 0.66
ATPAF1-213ENST00000574428 ST8SIA3O43173 380 aa19.17■□□□□ 0.66
ATPAF1-213ENST00000574428 NDUFA3O95167 84 aa19.17■□□□□ 0.66
ATPAF1-213ENST00000574428 NKX2-1P43699 371 aaPredicted RBP19.17■□□□□ 0.66
ATPAF1-213ENST00000574428 MRGPRG-AS1Q2M3A8 158 aa19.17■□□□□ 0.66
ATPAF1-213ENST00000574428 OR4A5Q8NH83 315 aa19.17■□□□□ 0.66
ATPAF1-213ENST00000574428 RNF126Q9BV68 326 aa19.17■□□□□ 0.66
ATPAF1-213ENST00000574428 TCF19Q9Y242 345 aa19.17■□□□□ 0.66
ATPAF1-213ENST00000574428 LSM5Q9Y4Y9 91 aaKnown RBP19.17■□□□□ 0.66
ATPAF1-213ENST00000574428 ZFHX3Q15911 3703 aa19.17■□□□□ 0.66
ATPAF1-213ENST00000574428 H0YIZ8 118 aa19.16■□□□□ 0.66
ATPAF1-213ENST00000574428 CFDP00746 253 aaPredicted RBP19.16■□□□□ 0.66
ATPAF1-213ENST00000574428 ZNF345Q14585 488 aa19.16■□□□□ 0.66
ATPAF1-213ENST00000574428 TMEM14BQ9NUH8 114 aa19.16■□□□□ 0.66
ATPAF1-213ENST00000574428 FOXA2Q9Y261 457 aaPredicted RBP19.16■□□□□ 0.66
ATPAF1-213ENST00000574428 IER3P46695 156 aa19.16■□□□□ 0.66
ATPAF1-213ENST00000574428 POLR2GP62487 172 aaKnown RBP eCLIP19.16■□□□□ 0.66
ATPAF1-213ENST00000574428 RPL8P62917 257 aaKnown RBP19.16■□□□□ 0.66
ATPAF1-213ENST00000574428 SPINK9Q5DT21 86 aa19.16■□□□□ 0.66
ATPAF1-213ENST00000574428 PPP1R27Q86WC6 154 aa19.16■□□□□ 0.66
ATPAF1-213ENST00000574428 PRNDQ9UKY0 176 aa19.16■□□□□ 0.66
ATPAF1-213ENST00000574428 A0A0D9SG52 128 aa19.15■□□□□ 0.66
ATPAF1-213ENST00000574428 K7EPK0 472 aa19.15■□□□□ 0.66
ATPAF1-213ENST00000574428 OPN1MWP04001 364 aa19.15■□□□□ 0.66
ATPAF1-213ENST00000574428 OPN1MW2P0DN77 364 aa19.15■□□□□ 0.66
ATPAF1-213ENST00000574428 OPN1MW3P0DN78 364 aa19.15■□□□□ 0.66
ATPAF1-213ENST00000574428 HTR2BP41595 481 aa19.15■□□□□ 0.66
ATPAF1-213ENST00000574428 ID3Q02535 119 aa19.15■□□□□ 0.66
ATPAF1-213ENST00000574428 EXOSC2Q13868 293 aaKnown RBP19.15■□□□□ 0.66
ATPAF1-213ENST00000574428 PRSS8Q16651 343 aa19.15■□□□□ 0.66
ATPAF1-213ENST00000574428 C5orf64Q2M2E5 130 aa19.15■□□□□ 0.66
ATPAF1-213ENST00000574428 Q6YL49 198 aa19.15■□□□□ 0.66
ATPAF1-213ENST00000574428 KCNRGQ8N5I3 272 aa19.15■□□□□ 0.66
ATPAF1-213ENST00000574428 FAM71E2Q8N5Q1 922 aa19.15■□□□□ 0.66
ATPAF1-213ENST00000574428 DCUN1D4Q92564 292 aa19.15■□□□□ 0.66
ATPAF1-213ENST00000574428 SLC25A33Q9BSK2 321 aa19.15■□□□□ 0.66
ATPAF1-213ENST00000574428 HSPB7Q9UBY9 170 aa19.15■□□□□ 0.66
ATPAF1-213ENST00000574428 OR51B2Q9Y5P1 312 aa19.15■□□□□ 0.66
ATPAF1-213ENST00000574428 POMT1Q9Y6A1 747 aa19.15■□□□□ 0.66
ATPAF1-213ENST00000574428 NAV3Q8IVL0 2385 aa19.15■□□□□ 0.66
ATPAF1-213ENST00000574428 A6NDX4 124 aa19.14■□□□□ 0.66
ATPAF1-213ENST00000574428 FCN1O00602 326 aa19.14■□□□□ 0.66
ATPAF1-213ENST00000574428 OR2F2O95006 317 aa19.14■□□□□ 0.66
ATPAF1-213ENST00000574428 LYL1P12980 280 aa19.14■□□□□ 0.66
ATPAF1-213ENST00000574428 TNFRSF9Q07011 255 aa19.14■□□□□ 0.66
ATPAF1-213ENST00000574428 OR2F1Q13607 317 aa19.14■□□□□ 0.66
ATPAF1-213ENST00000574428 AARDQ4LEZ3 155 aa19.14■□□□□ 0.66
ATPAF1-213ENST00000574428 PRSS54Q6PEW0 395 aa19.14■□□□□ 0.66
ATPAF1-213ENST00000574428 ACOT7LQ6ZUV0 252 aa19.14■□□□□ 0.66
ATPAF1-213ENST00000574428 ZNF429Q86V71 674 aa19.14■□□□□ 0.66
ATPAF1-213ENST00000574428 SIGLECL1Q8N7X8 197 aa19.14■□□□□ 0.66
ATPAF1-213ENST00000574428 RBM14Q96PK6 669 aaKnown RBP19.14■□□□□ 0.66
ATPAF1-213ENST00000574428 TNFRSF19Q9NS68 423 aa19.14■□□□□ 0.66
ATPAF1-213ENST00000574428 OR5AC2Q9NZP5 309 aa19.14■□□□□ 0.66
ATPAF1-213ENST00000574428 RCL1Q9Y2P8 373 aaKnown RBP19.14■□□□□ 0.66
ATPAF1-213ENST00000574428 SSSCA1O60232 199 aa19.14■□□□□ 0.65
ATPAF1-213ENST00000574428 IFNA17P01571 189 aa19.14■□□□□ 0.65
ATPAF1-213ENST00000574428 GNB1P62873 340 aa19.14■□□□□ 0.65
ATPAF1-213ENST00000574428 Q8N9W7 124 aa19.14■□□□□ 0.65
ATPAF1-213ENST00000574428 C1RLQ9NZP8 487 aa19.14■□□□□ 0.65
ATPAF1-213ENST00000574428 KCNAB3O43448 404 aa19.13■□□□□ 0.65
ATPAF1-213ENST00000574428 IFNA7P01567 189 aa19.13■□□□□ 0.65
ATPAF1-213ENST00000574428 C10orf55Q5SWW7 151 aa19.13■□□□□ 0.65
ATPAF1-213ENST00000574428 MMD2Q8IY49 270 aa19.13■□□□□ 0.65
ATPAF1-213ENST00000574428 RBKSQ9H477 322 aa19.13■□□□□ 0.65
ATPAF1-213ENST00000574428 PRDM13Q9H4Q3 707 aa19.13■□□□□ 0.65
ATPAF1-213ENST00000574428 FAM90A26D6RGX4 464 aa19.12■□□□□ 0.65
ATPAF1-213ENST00000574428 PET100P0DJ07 73 aa19.12■□□□□ 0.65
ATPAF1-213ENST00000574428 TNXAQ16473 311 aa19.12■□□□□ 0.65
ATPAF1-213ENST00000574428 INO80EQ8NBZ0 244 aaPredicted RBP19.12■□□□□ 0.65
ATPAF1-213ENST00000574428 COMMD5Q9GZQ3 224 aa19.12■□□□□ 0.65
ATPAF1-213ENST00000574428 ANK3Q12955 4377 aaKnown RBP19.12■□□□□ 0.65
ATPAF1-213ENST00000574428 TEX50A0A1B0GTY4 177 aa19.11■□□□□ 0.65
ATPAF1-213ENST00000574428 WRBO00258 174 aa19.11■□□□□ 0.65
ATPAF1-213ENST00000574428 HOXA3O43365 443 aaPredicted RBP19.11■□□□□ 0.65
ATPAF1-213ENST00000574428 CA2P00918 260 aa19.11■□□□□ 0.65
ATPAF1-213ENST00000574428 HINT2Q9BX68 163 aa19.11■□□□□ 0.65
ATPAF1-213ENST00000574428 FKBP11Q9NYL4 201 aa19.11■□□□□ 0.65
ATPAF1-213ENST00000574428 PITPNC1Q9UKF7 332 aa19.11■□□□□ 0.65
ATPAF1-213ENST00000574428 MOB4Q9Y3A3 225 aa19.11■□□□□ 0.65
ATPAF1-213ENST00000574428 TET2Q6N021 2002 aaPredicted RBP19.11■□□□□ 0.65
ATPAF1-213ENST00000574428 CHST1O43916 411 aa19.11■□□□□ 0.65
ATPAF1-213ENST00000574428 DEDDO75618 318 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms