RNA–Protein interactions for RNA: ENST00000574099.1

CCDC40-211, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 537 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-211ENST00000574099 PKHD1P08F94 4074 aa12.87□□□□□ -0.35
CCDC40-211ENST00000574099 MPTX1A8MV57 137 aa12.86□□□□□ -0.35
CCDC40-211ENST00000574099 TGOLN2O43493 480 aa12.86□□□□□ -0.35
CCDC40-211ENST00000574099 IGLV2-14P01704 120 aa12.86□□□□□ -0.35
CCDC40-211ENST00000574099 HIST1H1DP16402 221 aaKnown RBP12.86□□□□□ -0.35
CCDC40-211ENST00000574099 GADD45AP24522 165 aa12.86□□□□□ -0.35
CCDC40-211ENST00000574099 TALDO1P37837 337 aa12.86□□□□□ -0.35
CCDC40-211ENST00000574099 RPS25P62851 125 aaKnown RBP12.86□□□□□ -0.35
CCDC40-211ENST00000574099 RPL8P62917 257 aaKnown RBP12.86□□□□□ -0.35
CCDC40-211ENST00000574099 SPHARQ15513 63 aa12.86□□□□□ -0.35
CCDC40-211ENST00000574099 KLK9Q2XQG4 91 aa12.86□□□□□ -0.35
CCDC40-211ENST00000574099 OR10R2Q8NGX6 335 aa12.86□□□□□ -0.35
CCDC40-211ENST00000574099 UFD1Q92890 307 aa12.86□□□□□ -0.35
CCDC40-211ENST00000574099 C20orf24Q9BUV8 137 aa12.86□□□□□ -0.35
CCDC40-211ENST00000574099 C6orf62Q9GZU0 229 aaPredicted RBP12.86□□□□□ -0.35
CCDC40-211ENST00000574099 CSTL1Q9H114 145 aa12.86□□□□□ -0.35
CCDC40-211ENST00000574099 C11orf68Q9H3H3 251 aaKnown RBP12.86□□□□□ -0.35
CCDC40-211ENST00000574099 DAZ1Q9NQZ3 744 aaKnown RBP12.86□□□□□ -0.35
CCDC40-211ENST00000574099 PLCXD1Q9NUJ7 323 aa12.86□□□□□ -0.35
CCDC40-211ENST00000574099 FKBP14Q9NWM8 211 aa12.86□□□□□ -0.35
CCDC40-211ENST00000574099 KLK9Q9UKQ9 250 aa12.86□□□□□ -0.35
CCDC40-211ENST00000574099 APLNQ9ULZ1 77 aa12.86□□□□□ -0.35
CCDC40-211ENST00000574099 LSM2Q9Y333 95 aaKnown RBP12.86□□□□□ -0.35
CCDC40-211ENST00000574099 IGKV1D-13A0A0B4J2D9 117 aa12.85□□□□□ -0.35
CCDC40-211ENST00000574099 A0A1B0GVY2 172 aa12.85□□□□□ -0.35
CCDC40-211ENST00000574099 OR2T8A6NH00 312 aa12.85□□□□□ -0.35
CCDC40-211ENST00000574099 CTSDP07339 412 aaPredicted RBP12.85□□□□□ -0.35
CCDC40-211ENST00000574099 IGKV1-13P0DP09 117 aa12.85□□□□□ -0.35
CCDC40-211ENST00000574099 MED14OSP0DP75 135 aa12.85□□□□□ -0.35
CCDC40-211ENST00000574099 HLA-GP17693 338 aa12.85□□□□□ -0.35
CCDC40-211ENST00000574099 CALRP27797 417 aaKnown RBP12.85□□□□□ -0.35
CCDC40-211ENST00000574099 LINC00336Q6ZUF6 198 aa12.85□□□□□ -0.35
CCDC40-211ENST00000574099 TAS2R8Q9NYW2 309 aa12.85□□□□□ -0.35
CCDC40-211ENST00000574099 ELF5Q9UKW6 265 aaPredicted RBP12.85□□□□□ -0.35
CCDC40-211ENST00000574099 OR2W1Q9Y3N9 320 aa12.85□□□□□ -0.35
CCDC40-211ENST00000574099 FAT2Q9NYQ8 4349 aa12.85□□□□□ -0.35
CCDC40-211ENST00000574099 MUC4Q99102 2169 aa12.84□□□□□ -0.35
CCDC40-211ENST00000574099 TFPI2P48307 235 aa12.84□□□□□ -0.35
CCDC40-211ENST00000574099 MFAP2P55001 183 aa12.84□□□□□ -0.35
CCDC40-211ENST00000574099 TCTAP57738 103 aa12.84□□□□□ -0.35
CCDC40-211ENST00000574099 BRWD1-AS2P59051 145 aa12.84□□□□□ -0.35
CCDC40-211ENST00000574099 V9GY05 133 aa12.84□□□□□ -0.35
CCDC40-211ENST00000574099 DNAH2Q9P225 4427 aa12.83□□□□□ -0.36
CCDC40-211ENST00000574099 ARL6IP5O75915 188 aa12.83□□□□□ -0.36
CCDC40-211ENST00000574099 HLA-DQB1P01920 261 aa12.83□□□□□ -0.36
CCDC40-211ENST00000574099 Q6ZS49 121 aa12.83□□□□□ -0.36
CCDC40-211ENST00000574099 GVQW1Q8N7I0 195 aa12.83□□□□□ -0.36
CCDC40-211ENST00000574099 HSD17B10Q99714 261 aaKnown RBP12.83□□□□□ -0.36
CCDC40-211ENST00000574099 HRASLSQ9HDD0 168 aa12.83□□□□□ -0.36
CCDC40-211ENST00000574099 IGKV3-7A0A075B6H7 116 aa12.82□□□□□ -0.36
CCDC40-211ENST00000574099 IGHV3-21A0A0B4J1V1 117 aa12.82□□□□□ -0.36
CCDC40-211ENST00000574099 IGLC7A0M8Q6 106 aa12.82□□□□□ -0.36
CCDC40-211ENST00000574099 PTGES3LE9PB15 166 aa12.82□□□□□ -0.36
CCDC40-211ENST00000574099 HRASP01112 189 aa12.82□□□□□ -0.36
CCDC40-211ENST00000574099 HSMCR30P0CW71 290 aa12.82□□□□□ -0.36
CCDC40-211ENST00000574099 PTBP1P26599 531 aaKnown RBP eCLIP12.82□□□□□ -0.36
CCDC40-211ENST00000574099 OR2B8PP59922 312 aa12.82□□□□□ -0.36
CCDC40-211ENST00000574099 EIF4EBP1Q13541 118 aaPredicted RBP12.82□□□□□ -0.36
CCDC40-211ENST00000574099 TIMM50Q3ZCQ8 353 aa12.82□□□□□ -0.36
CCDC40-211ENST00000574099 MFSD4AQ8N468 514 aa12.82□□□□□ -0.36
CCDC40-211ENST00000574099 OR4A5Q8NH83 315 aa12.82□□□□□ -0.36
CCDC40-211ENST00000574099 CENPOQ9BU64 300 aa12.82□□□□□ -0.36
CCDC40-211ENST00000574099 THYN1Q9P016 225 aa12.82□□□□□ -0.36
CCDC40-211ENST00000574099 TNFSF12O43508 249 aa12.81□□□□□ -0.36
CCDC40-211ENST00000574099 SLC22A5O76082 557 aa12.81□□□□□ -0.36
CCDC40-211ENST00000574099 CA1P00915 261 aaPredicted RBP12.81□□□□□ -0.36
CCDC40-211ENST00000574099 RNF2Q99496 336 aa12.81□□□□□ -0.36
CCDC40-211ENST00000574099 CHRDL1Q9BU40 450 aa12.81□□□□□ -0.36
CCDC40-211ENST00000574099 BET1LQ9NYM9 111 aa12.81□□□□□ -0.36
CCDC40-211ENST00000574099 ABCA13Q86UQ4 5058 aa12.8□□□□□ -0.36
CCDC40-211ENST00000574099 IGHV3-49A0A0A0MS15 119 aa12.8□□□□□ -0.36
CCDC40-211ENST00000574099 TRAV3A0A0B4J244 114 aa12.8□□□□□ -0.36
CCDC40-211ENST00000574099 NDUFA4O00483 81 aa12.8□□□□□ -0.36
CCDC40-211ENST00000574099 OR10A3P58181 314 aa12.8□□□□□ -0.36
CCDC40-211ENST00000574099 FABP5Q01469 135 aa12.8□□□□□ -0.36
CCDC40-211ENST00000574099 UBAC2Q8NBM4 344 aa12.8□□□□□ -0.36
CCDC40-211ENST00000574099 OR10W1Q8NGF6 305 aa12.8□□□□□ -0.36
CCDC40-211ENST00000574099 BSCL2Q96G97 398 aaPredicted RBP12.8□□□□□ -0.36
CCDC40-211ENST00000574099 PRSS29PA6NIE9 313 aa12.79□□□□□ -0.36
CCDC40-211ENST00000574099 DTYMKP23919 212 aa12.79□□□□□ -0.36
CCDC40-211ENST00000574099 PACRGLQ8N7B6 248 aa12.79□□□□□ -0.36
CCDC40-211ENST00000574099 VN1R17PQ8TDU5 208 aa12.79□□□□□ -0.36
CCDC40-211ENST00000574099 KRTAP4-5Q9BYR2 181 aa12.79□□□□□ -0.36
CCDC40-211ENST00000574099 DYNC1H1Q14204 4646 aaKnown RBP12.79□□□□□ -0.36
CCDC40-211ENST00000574099 CTXN2P0C2S0 81 aa12.78□□□□□ -0.36
CCDC40-211ENST00000574099 RANBP1P43487 201 aa12.78□□□□□ -0.36
CCDC40-211ENST00000574099 IRF3Q14653 427 aa12.78□□□□□ -0.36
CCDC40-211ENST00000574099 TMEM187Q14656 261 aa12.78□□□□□ -0.36
CCDC40-211ENST00000574099 TRAM1Q15629 374 aa12.78□□□□□ -0.36
CCDC40-211ENST00000574099 SLC25A24Q6NUK1 477 aa12.78□□□□□ -0.36
CCDC40-211ENST00000574099 ZNF66Q6ZN08 573 aa12.78□□□□□ -0.36
CCDC40-211ENST00000574099 GBGT1Q8N5D6 347 aa12.78□□□□□ -0.36
CCDC40-211ENST00000574099 COMMD5Q9GZQ3 224 aa12.78□□□□□ -0.36
CCDC40-211ENST00000574099 ATG5Q9H1Y0 275 aa12.78□□□□□ -0.36
CCDC40-211ENST00000574099 SMPXQ9UHP9 88 aa12.78□□□□□ -0.36
CCDC40-211ENST00000574099 IGHV4-4A0A075B6R2 117 aa12.77□□□□□ -0.37
CCDC40-211ENST00000574099 C11orf94C9JXX5 98 aa12.77□□□□□ -0.37
CCDC40-211ENST00000574099 RAB6AP20340 208 aa12.77□□□□□ -0.37
CCDC40-211ENST00000574099 ADMP35318 185 aa12.77□□□□□ -0.37
CCDC40-211ENST00000574099 SSX1Q16384 188 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms