RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 CBLN4Q9NTU7 201 aa15.72■□□□□ 0.11
SCARF1-206ENST00000573852 SRRM5B3KS81 715 aa15.71■□□□□ 0.11
SCARF1-206ENST00000573852 MBNL2Q5VZF2 373 aaKnown RBP15.71■□□□□ 0.11
SCARF1-206ENST00000573852 STPG3Q8N7X2 389 aa15.71■□□□□ 0.11
SCARF1-206ENST00000573852 IGHV1-18A0A0C4DH31 117 aa15.71■□□□□ 0.11
SCARF1-206ENST00000573852 TCAPO15273 167 aa15.71■□□□□ 0.11
SCARF1-206ENST00000573852 IGHG3P01860 377 aa15.71■□□□□ 0.11
SCARF1-206ENST00000573852 ERVFC1-1P60608 527 aa15.71■□□□□ 0.11
SCARF1-206ENST00000573852 NUTF2P61970 127 aaKnown RBP15.71■□□□□ 0.11
SCARF1-206ENST00000573852 ZNF90Q03938 601 aa15.71■□□□□ 0.11
SCARF1-206ENST00000573852 MSMPQ1L6U9 139 aa15.71■□□□□ 0.11
SCARF1-206ENST00000573852 SPRNQ5BIV9 151 aa15.71■□□□□ 0.11
SCARF1-206ENST00000573852 HES3Q5TGS1 186 aa15.71■□□□□ 0.11
SCARF1-206ENST00000573852 DDB2Q92466 427 aa15.71■□□□□ 0.11
SCARF1-206ENST00000573852 A0A1B0GWJ7 208 aa15.71■□□□□ 0.1
SCARF1-206ENST00000573852 F2RL2O00254 374 aa15.71■□□□□ 0.1
SCARF1-206ENST00000573852 CDX4O14627 284 aaPredicted RBP15.71■□□□□ 0.1
SCARF1-206ENST00000573852 MGST3O14880 152 aa15.71■□□□□ 0.1
SCARF1-206ENST00000573852 LINC00310P59036 64 aa15.71■□□□□ 0.1
SCARF1-206ENST00000573852 CR1LQ2VPA4 569 aa15.71■□□□□ 0.1
SCARF1-206ENST00000573852 LRP11Q86VZ4 500 aa15.71■□□□□ 0.1
SCARF1-206ENST00000573852 CMTM2Q8TAZ6 248 aa15.71■□□□□ 0.1
SCARF1-206ENST00000573852 ATG101Q9BSB4 218 aa15.71■□□□□ 0.1
SCARF1-206ENST00000573852 TRGV8A0A0C4DH27 118 aa15.7■□□□□ 0.1
SCARF1-206ENST00000573852 IGLV1-44P01699 117 aa15.7■□□□□ 0.1
SCARF1-206ENST00000573852 SELENOTP62341 195 aa15.7■□□□□ 0.1
SCARF1-206ENST00000573852 TEPPQ6URK8 271 aa15.7■□□□□ 0.1
SCARF1-206ENST00000573852 C1orf162Q8NEQ5 155 aaPredicted RBP15.7■□□□□ 0.1
SCARF1-206ENST00000573852 GUCD1Q96NT3 240 aa15.7■□□□□ 0.1
SCARF1-206ENST00000573852 CHODLQ9H9P2 273 aa15.7■□□□□ 0.1
SCARF1-206ENST00000573852 IL36BQ9NZH7 164 aa15.7■□□□□ 0.1
SCARF1-206ENST00000573852 KIR2DL5BA0A0G2JN68 375 aa15.7■□□□□ 0.1
SCARF1-206ENST00000573852 KIR2DL5BA0A0G2JPC4 375 aa15.7■□□□□ 0.1
SCARF1-206ENST00000573852 C15orf61A6NNL5 157 aa15.7■□□□□ 0.1
SCARF1-206ENST00000573852 FRMD6-AS1P0C7T7 363 aa15.7■□□□□ 0.1
SCARF1-206ENST00000573852 OR10J1P30954 320 aa15.7■□□□□ 0.1
SCARF1-206ENST00000573852 RHOBP62745 196 aa15.7■□□□□ 0.1
SCARF1-206ENST00000573852 KIR2DL5AQ8N109 375 aa15.7■□□□□ 0.1
SCARF1-206ENST00000573852 GCSAMQ8N6F7 178 aa15.7■□□□□ 0.1
SCARF1-206ENST00000573852 NEU1Q99519 415 aa15.7■□□□□ 0.1
SCARF1-206ENST00000573852 TUBG2Q9NRH3 451 aa15.7■□□□□ 0.1
SCARF1-206ENST00000573852 INTS1Q8N201 2190 aaKnown RBP15.69■□□□□ 0.1
SCARF1-206ENST00000573852 MYOD1P15172 320 aa15.69■□□□□ 0.1
SCARF1-206ENST00000573852 OPN3Q9H1Y3 402 aaPredicted RBP15.69■□□□□ 0.1
SCARF1-206ENST00000573852 ZNF705FA8MVS1 300 aaPredicted RBP15.69■□□□□ 0.1
SCARF1-206ENST00000573852 ZNF705DP0CH99 300 aaPredicted RBP15.69■□□□□ 0.1
SCARF1-206ENST00000573852 ZNF705BP0CI00 300 aaPredicted RBP15.69■□□□□ 0.1
SCARF1-206ENST00000573852 NPY1RP25929 384 aa15.69■□□□□ 0.1
SCARF1-206ENST00000573852 OR4P4Q8NGL7 312 aa15.69■□□□□ 0.1
SCARF1-206ENST00000573852 ZCCHC14Q8WYQ9 949 aaKnown RBP15.69■□□□□ 0.1
SCARF1-206ENST00000573852 TBX15Q96SF7 602 aa15.69■□□□□ 0.1
SCARF1-206ENST00000573852 CA2P00918 260 aa15.68■□□□□ 0.1
SCARF1-206ENST00000573852 OR4A47Q6IF82 309 aa15.68■□□□□ 0.1
SCARF1-206ENST00000573852 Q6ZWC4 215 aa15.68■□□□□ 0.1
SCARF1-206ENST00000573852 SLC24A4Q8NFF2 622 aa15.68■□□□□ 0.1
SCARF1-206ENST00000573852 OR4S2Q8NH73 311 aa15.68■□□□□ 0.1
SCARF1-206ENST00000573852 C11orf52Q96A22 123 aa15.68■□□□□ 0.1
SCARF1-206ENST00000573852 MRPL18Q9H0U6 180 aaKnown RBP15.68■□□□□ 0.1
SCARF1-206ENST00000573852 CALYQ9NYX4 217 aa15.68■□□□□ 0.1
SCARF1-206ENST00000573852 CGAP01215 116 aa15.68■□□□□ 0.1
SCARF1-206ENST00000573852 IGFBP2P18065 325 aa15.68■□□□□ 0.1
SCARF1-206ENST00000573852 CACNA1GO43497 2377 aa15.67■□□□□ 0.1
SCARF1-206ENST00000573852 KIR2DS2P43631 304 aa15.67■□□□□ 0.1
SCARF1-206ENST00000573852 RPL29P47914 159 aaKnown RBP15.67■□□□□ 0.1
SCARF1-206ENST00000573852 KRTCAP3Q53RY4 240 aa15.67■□□□□ 0.1
SCARF1-206ENST00000573852 CT45A1Q5HYN5 189 aa15.67■□□□□ 0.1
SCARF1-206ENST00000573852 CT45A3Q8NHU0 189 aa15.67■□□□□ 0.1
SCARF1-206ENST00000573852 EAF1Q96JC9 268 aaPredicted RBP15.67■□□□□ 0.1
SCARF1-206ENST00000573852 TMEM14BQ9NUH8 114 aa15.67■□□□□ 0.1
SCARF1-206ENST00000573852 TMEM106BQ9NUM4 274 aa15.67■□□□□ 0.1
SCARF1-206ENST00000573852 LGALS4P56470 323 aa15.67■□□□□ 0.1
SCARF1-206ENST00000573852 HSPE1P61604 102 aaKnown RBP15.67■□□□□ 0.1
SCARF1-206ENST00000573852 OR5I1Q13606 314 aa15.67■□□□□ 0.1
SCARF1-206ENST00000573852 MIR17HGQ75NE6 70 aa15.67■□□□□ 0.1
SCARF1-206ENST00000573852 OR1L6Q8NGR2 347 aa15.67■□□□□ 0.1
SCARF1-206ENST00000573852 PPP1R35Q8TAP8 253 aa15.67■□□□□ 0.1
SCARF1-206ENST00000573852 FAM216AQ8WUB2 273 aa15.67■□□□□ 0.1
SCARF1-206ENST00000573852 TRGV10A0A0A0MS01 117 aa15.66■□□□□ 0.1
SCARF1-206ENST00000573852 AHRRA9YTQ3 701 aa15.66■□□□□ 0.1
SCARF1-206ENST00000573852 C9JCJ5 164 aa15.66■□□□□ 0.1
SCARF1-206ENST00000573852 SERF1AO75920 110 aa15.66■□□□□ 0.1
SCARF1-206ENST00000573852 ACTL6BO94805 426 aa15.66■□□□□ 0.1
SCARF1-206ENST00000573852 CGB3P0DN86 165 aa15.66■□□□□ 0.1
SCARF1-206ENST00000573852 CGB7P0DN87 165 aa15.66■□□□□ 0.1
SCARF1-206ENST00000573852 CRISP2P16562 243 aa15.66■□□□□ 0.1
SCARF1-206ENST00000573852 G0S2P27469 103 aa15.66■□□□□ 0.1
SCARF1-206ENST00000573852 PRR20EP86478 221 aa15.66■□□□□ 0.1
SCARF1-206ENST00000573852 PRR20CP86479 221 aa15.66■□□□□ 0.1
SCARF1-206ENST00000573852 PRR20DP86480 221 aa15.66■□□□□ 0.1
SCARF1-206ENST00000573852 PRR20BP86481 221 aa15.66■□□□□ 0.1
SCARF1-206ENST00000573852 PRR20AP86496 221 aa15.66■□□□□ 0.1
SCARF1-206ENST00000573852 C17orf58Q2M2W7 97 aa15.66■□□□□ 0.1
SCARF1-206ENST00000573852 FOXA2Q9Y261 457 aaPredicted RBP15.66■□□□□ 0.1
SCARF1-206ENST00000573852 CADP27708 2225 aa15.66■□□□□ 0.1
SCARF1-206ENST00000573852 SAA2-SAA4A0A096LPE2 208 aa15.66■□□□□ 0.1
SCARF1-206ENST00000573852 F2Z2F3 143 aa15.66■□□□□ 0.1
SCARF1-206ENST00000573852 LINC00869P0C866 280 aa15.66■□□□□ 0.1
SCARF1-206ENST00000573852 SAA2P0DJI9 122 aaPredicted RBP15.66■□□□□ 0.1
SCARF1-206ENST00000573852 CCL11P51671 97 aa15.66■□□□□ 0.1
SCARF1-206ENST00000573852 MZT1Q08AG7 82 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms