RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 GDPD1Q8N9F7 314 aa12.3□□□□□ -0.44
CHD3-215ENST00000572750 OR4A5Q8NH83 315 aa12.3□□□□□ -0.44
CHD3-215ENST00000572750 DUX3Q96PT4 197 aa12.3□□□□□ -0.44
CHD3-215ENST00000572750 FYTTD1Q96QD9 318 aaKnown RBP12.3□□□□□ -0.44
CHD3-215ENST00000572750 OR5B12Q96R08 314 aa12.3□□□□□ -0.44
CHD3-215ENST00000572750 RTBDNQ9BSG5 229 aaPredicted RBP12.3□□□□□ -0.44
CHD3-215ENST00000572750 COA4Q9NYJ1 87 aa12.3□□□□□ -0.44
CHD3-215ENST00000572750 VSIG4Q9Y279 399 aa12.3□□□□□ -0.44
CHD3-215ENST00000572750 C3orf85A0A1B0GTC6 90 aa12.29□□□□□ -0.44
CHD3-215ENST00000572750 HMX3A6NHT5 357 aa12.29□□□□□ -0.44
CHD3-215ENST00000572750 TEX22C9J3V5 150 aa12.29□□□□□ -0.44
CHD3-215ENST00000572750 UPK2O00526 184 aa12.29□□□□□ -0.44
CHD3-215ENST00000572750 SERPINE2P07093 398 aa12.29□□□□□ -0.44
CHD3-215ENST00000572750 CDX1P47902 265 aaPredicted RBP12.29□□□□□ -0.44
CHD3-215ENST00000572750 OR2B8PP59922 312 aa12.29□□□□□ -0.44
CHD3-215ENST00000572750 KIAA0141Q14154 515 aaPredicted RBP12.29□□□□□ -0.44
CHD3-215ENST00000572750 SP6Q3SY56 376 aa12.29□□□□□ -0.44
CHD3-215ENST00000572750 C19orf35Q6ZS72 473 aa12.29□□□□□ -0.44
CHD3-215ENST00000572750 ZNF491Q8N8L2 437 aa12.29□□□□□ -0.44
CHD3-215ENST00000572750 C4orf3Q8WVX3 66 aa12.29□□□□□ -0.44
CHD3-215ENST00000572750 SPIN2AQ99865 258 aa12.29□□□□□ -0.44
CHD3-215ENST00000572750 SPIN2BQ9BPZ2 258 aa12.29□□□□□ -0.44
CHD3-215ENST00000572750 AKIP1Q9NQ31 210 aa12.29□□□□□ -0.44
CHD3-215ENST00000572750 ZNF355PQ9NSJ1 428 aa12.29□□□□□ -0.44
CHD3-215ENST00000572750 FAM212BQ9NTI7 297 aaPredicted RBP12.29□□□□□ -0.44
CHD3-215ENST00000572750 LINC00854A0A1B0GVQ3 168 aa12.28□□□□□ -0.44
CHD3-215ENST00000572750 TRGV3P03979 118 aa12.28□□□□□ -0.44
CHD3-215ENST00000572750 IL6RP08887 468 aaPredicted RBP12.28□□□□□ -0.44
CHD3-215ENST00000572750 OR9G9P0C7N8 305 aa12.28□□□□□ -0.44
CHD3-215ENST00000572750 IL7P13232 177 aa12.28□□□□□ -0.44
CHD3-215ENST00000572750 MAS1LP35410 378 aa12.28□□□□□ -0.44
CHD3-215ENST00000572750 INPP1P49441 399 aa12.28□□□□□ -0.44
CHD3-215ENST00000572750 ZNF45Q02386 682 aa12.28□□□□□ -0.44
CHD3-215ENST00000572750 ADAD2Q8NCV1 583 aaKnown RBP12.28□□□□□ -0.44
CHD3-215ENST00000572750 RAX2Q96IS3 184 aa12.28□□□□□ -0.44
CHD3-215ENST00000572750 UBE2E2Q96LR5 201 aa12.28□□□□□ -0.44
CHD3-215ENST00000572750 NAA60Q9H7X0 242 aa12.28□□□□□ -0.44
CHD3-215ENST00000572750 PTTG2Q9NZH5 202 aa12.28□□□□□ -0.44
CHD3-215ENST00000572750 GPR132Q9UNW8 380 aa12.28□□□□□ -0.44
CHD3-215ENST00000572750 NSG2Q9Y328 171 aa12.28□□□□□ -0.44
CHD3-215ENST00000572750 TENM3Q9P273 2699 aa12.28□□□□□ -0.44
CHD3-215ENST00000572750 TEX13DA0A0J9YY54 714 aaPredicted RBP12.27□□□□□ -0.45
CHD3-215ENST00000572750 CRYM-AS1A6NIL9 109 aa12.27□□□□□ -0.45
CHD3-215ENST00000572750 CGB1A6NKQ9 187 aa12.27□□□□□ -0.45
CHD3-215ENST00000572750 IGHV3-11P01762 117 aa12.27□□□□□ -0.45
CHD3-215ENST00000572750 PRH1P02810 166 aa12.27□□□□□ -0.45
CHD3-215ENST00000572750 OR5AC1P0C628 307 aa12.27□□□□□ -0.45
CHD3-215ENST00000572750 CD40LGP29965 261 aa12.27□□□□□ -0.45
CHD3-215ENST00000572750 SLC6A1P30531 599 aa12.27□□□□□ -0.45
CHD3-215ENST00000572750 TRIM16LQ309B1 348 aa12.27□□□□□ -0.45
CHD3-215ENST00000572750 TMEM230Q96A57 120 aa12.27□□□□□ -0.45
CHD3-215ENST00000572750 SEC22AQ96IW7 307 aa12.27□□□□□ -0.45
CHD3-215ENST00000572750 TMEM68Q96MH6 324 aa12.27□□□□□ -0.45
CHD3-215ENST00000572750 COMMD5Q9GZQ3 224 aa12.27□□□□□ -0.45
CHD3-215ENST00000572750 ALX4Q9H161 411 aaPredicted RBP12.27□□□□□ -0.45
CHD3-215ENST00000572750 BATF3Q9NR55 127 aa12.27□□□□□ -0.45
CHD3-215ENST00000572750 H3BUA1 57 aa12.26□□□□□ -0.45
CHD3-215ENST00000572750 IGKV1-5P01602 117 aa12.26□□□□□ -0.45
CHD3-215ENST00000572750 REG1AP05451 166 aa12.26□□□□□ -0.45
CHD3-215ENST00000572750 AREGP15514 252 aa12.26□□□□□ -0.45
CHD3-215ENST00000572750 UCP1P25874 307 aa12.26□□□□□ -0.45
CHD3-215ENST00000572750 AKR1C2P52895 323 aa12.26□□□□□ -0.45
CHD3-215ENST00000572750 IZUMO4Q1ZYL8 232 aa12.26□□□□□ -0.45
CHD3-215ENST00000572750 MRPL41Q8IXM3 137 aaKnown RBP12.26□□□□□ -0.45
CHD3-215ENST00000572750 LINC00482Q8N8I6 264 aa12.26□□□□□ -0.45
CHD3-215ENST00000572750 DEDD2Q8WXF8 326 aa12.26□□□□□ -0.45
CHD3-215ENST00000572750 SLA2Q9H6Q3 261 aa12.26□□□□□ -0.45
CHD3-215ENST00000572750 PRR13Q9NZ81 148 aa12.26□□□□□ -0.45
CHD3-215ENST00000572750 DNAH3Q8TD57 4116 aa12.26□□□□□ -0.45
CHD3-215ENST00000572750 DBX1A6NMT0 343 aa12.25□□□□□ -0.45
CHD3-215ENST00000572750 C15orf61A6NNL5 157 aa12.25□□□□□ -0.45
CHD3-215ENST00000572750 CCL24O00175 119 aa12.25□□□□□ -0.45
CHD3-215ENST00000572750 RBMXL2O75526 392 aaKnown RBP12.25□□□□□ -0.45
CHD3-215ENST00000572750 CCR6P51684 374 aa12.25□□□□□ -0.45
CHD3-215ENST00000572750 RAB25P57735 213 aa12.25□□□□□ -0.45
CHD3-215ENST00000572750 H2BFWTQ7Z2G1 175 aa12.25□□□□□ -0.45
CHD3-215ENST00000572750 TMED4Q7Z7H5 227 aa12.25□□□□□ -0.45
CHD3-215ENST00000572750 LHFPL5Q8TAF8 219 aa12.25□□□□□ -0.45
CHD3-215ENST00000572750 P2RX4Q99571 388 aa12.25□□□□□ -0.45
CHD3-215ENST00000572750 QTRT1Q9BXR0 403 aaKnown RBP12.25□□□□□ -0.45
CHD3-215ENST00000572750 TMEM222Q9H0R3 208 aa12.25□□□□□ -0.45
CHD3-215ENST00000572750 COL7A1Q02388 2944 aa12.24□□□□□ -0.45
CHD3-215ENST00000572750 IGLC7A0M8Q6 106 aa12.24□□□□□ -0.45
CHD3-215ENST00000572750 I3L521 148 aa12.24□□□□□ -0.45
CHD3-215ENST00000572750 SNAPC5O75971 98 aa12.24□□□□□ -0.45
CHD3-215ENST00000572750 FGF2P09038 288 aa12.24□□□□□ -0.45
CHD3-215ENST00000572750 LGALS1P09382 135 aaKnown RBP12.24□□□□□ -0.45
CHD3-215ENST00000572750 AKR1C4P17516 323 aa12.24□□□□□ -0.45
CHD3-215ENST00000572750 CD33P20138 364 aa12.24□□□□□ -0.45
CHD3-215ENST00000572750 C1QL4Q86Z23 238 aa12.24□□□□□ -0.45
CHD3-215ENST00000572750 TTC9CQ8N5M4 171 aa12.24□□□□□ -0.45
CHD3-215ENST00000572750 OR10W1Q8NGF6 305 aa12.24□□□□□ -0.45
CHD3-215ENST00000572750 SCGB3A2Q96PL1 93 aa12.24□□□□□ -0.45
CHD3-215ENST00000572750 HINT2Q9BX68 163 aa12.24□□□□□ -0.45
CHD3-215ENST00000572750 ZNF257Q9Y2Q1 563 aa12.24□□□□□ -0.45
CHD3-215ENST00000572750 OR51B2Q9Y5P1 312 aa12.24□□□□□ -0.45
CHD3-215ENST00000572750 TEX50A0A1B0GTY4 177 aa12.23□□□□□ -0.45
CHD3-215ENST00000572750 NPIPB5A8MRT5 1133 aa12.23□□□□□ -0.45
CHD3-215ENST00000572750 B3GALNT1O75752 331 aa12.23□□□□□ -0.45
CHD3-215ENST00000572750 P0C879 139 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms