RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 OR5H2Q8NGV7 314 aa6.67□□□□□ -1.34
SMG6-210ENST00000572205 OR51H1Q8NH63 302 aa6.67□□□□□ -1.34
SMG6-210ENST00000572205 OR5B12Q96R08 314 aa6.67□□□□□ -1.34
SMG6-210ENST00000572205 RBM7Q9Y580 266 aaKnown RBP6.67□□□□□ -1.34
SMG6-210ENST00000572205 SORL1Q92673 2214 aa6.66□□□□□ -1.34
SMG6-210ENST00000572205 IGLC7A0M8Q6 106 aa6.66□□□□□ -1.34
SMG6-210ENST00000572205 HMX3A6NHT5 357 aa6.66□□□□□ -1.34
SMG6-210ENST00000572205 GABARAPH6UMI1 98 aa6.66□□□□□ -1.34
SMG6-210ENST00000572205 OR2A4O95047 310 aa6.66□□□□□ -1.34
SMG6-210ENST00000572205 IGHV3-11P01762 117 aa6.66□□□□□ -1.34
SMG6-210ENST00000572205 PRH1P02810 166 aa6.66□□□□□ -1.34
SMG6-210ENST00000572205 CRYGCP07315 174 aa6.66□□□□□ -1.34
SMG6-210ENST00000572205 AREGP15514 252 aa6.66□□□□□ -1.34
SMG6-210ENST00000572205 PTBP1P26599 531 aaKnown RBP eCLIP6.66□□□□□ -1.344e-7■■■■□ 26.4
SMG6-210ENST00000572205 KIR2DS2P43631 304 aa6.66□□□□□ -1.34
SMG6-210ENST00000572205 UCP3P55916 312 aa6.66□□□□□ -1.34
SMG6-210ENST00000572205 TAS2R31P59538 309 aa6.66□□□□□ -1.34
SMG6-210ENST00000572205 OR2B8PP59922 312 aa6.66□□□□□ -1.34
SMG6-210ENST00000572205 ZNF616Q08AN1 781 aa6.66□□□□□ -1.34
SMG6-210ENST00000572205 TNXAQ16473 311 aa6.66□□□□□ -1.34
SMG6-210ENST00000572205 MZT2AQ6P582 158 aa6.66□□□□□ -1.34
SMG6-210ENST00000572205 IL34Q6ZMJ4 242 aa6.66□□□□□ -1.34
SMG6-210ENST00000572205 MMD2Q8IY49 270 aa6.66□□□□□ -1.34
SMG6-210ENST00000572205 CADM3Q8N126 398 aa6.66□□□□□ -1.34
SMG6-210ENST00000572205 OR5T1Q8NG75 326 aa6.66□□□□□ -1.34
SMG6-210ENST00000572205 FCAMRQ8WWV6 532 aa6.66□□□□□ -1.34
SMG6-210ENST00000572205 DLX4Q92988 240 aaPredicted RBP6.66□□□□□ -1.34
SMG6-210ENST00000572205 MS4A10Q96PG2 267 aa6.66□□□□□ -1.34
SMG6-210ENST00000572205 OR2A7Q96R45 310 aa6.66□□□□□ -1.34
SMG6-210ENST00000572205 SLA2Q9H6Q3 261 aa6.66□□□□□ -1.34
SMG6-210ENST00000572205 PLEKHA2Q9HB19 425 aa6.66□□□□□ -1.34
SMG6-210ENST00000572205 TMEM140Q9NV12 185 aa6.66□□□□□ -1.34
SMG6-210ENST00000572205 COMMD9Q9P000 198 aa6.66□□□□□ -1.34
SMG6-210ENST00000572205 MRPS7Q9Y2R9 242 aaKnown RBP6.66□□□□□ -1.34
SMG6-210ENST00000572205 PRELID3BQ9Y3B1 194 aa6.66□□□□□ -1.34
SMG6-210ENST00000572205 STARD9Q9P2P6 4700 aa6.66□□□□□ -1.34
SMG6-210ENST00000572205 MSGN1A6NI15 193 aa6.65□□□□□ -1.34
SMG6-210ENST00000572205 MARCH11A6NNE9 402 aa6.65□□□□□ -1.34
SMG6-210ENST00000572205 NPIPB5A8MRT5 1133 aa6.65□□□□□ -1.34
SMG6-210ENST00000572205 GPR31O00270 319 aa6.65□□□□□ -1.34
SMG6-210ENST00000572205 UPK2O00526 184 aa6.65□□□□□ -1.34
SMG6-210ENST00000572205 GSTZ1O43708 216 aaPredicted RBP6.65□□□□□ -1.34
SMG6-210ENST00000572205 DUS4LO95620 317 aaKnown RBP6.65□□□□□ -1.34
SMG6-210ENST00000572205 HPRT1P00492 218 aa6.65□□□□□ -1.34
SMG6-210ENST00000572205 OR9G9P0C7N8 305 aa6.65□□□□□ -1.34
SMG6-210ENST00000572205 CTRB1P17538 263 aa6.65□□□□□ -1.34
SMG6-210ENST00000572205 TBPP20226 339 aa6.65□□□□□ -1.34
SMG6-210ENST00000572205 F2RP25116 425 aa6.65□□□□□ -1.34
SMG6-210ENST00000572205 MFAP2P55001 183 aa6.65□□□□□ -1.34
SMG6-210ENST00000572205 TPPP2P59282 170 aa6.65□□□□□ -1.34
SMG6-210ENST00000572205 HERV-K104P61576 105 aa6.65□□□□□ -1.34
SMG6-210ENST00000572205 RND3P61587 244 aa6.65□□□□□ -1.34
SMG6-210ENST00000572205 CTRB2Q6GPI1 263 aa6.65□□□□□ -1.34
SMG6-210ENST00000572205 ZNF343Q6P1L6 599 aa6.65□□□□□ -1.34
SMG6-210ENST00000572205 SSX9Q7RTT3 188 aa6.65□□□□□ -1.34
SMG6-210ENST00000572205 ARRDC1Q8N5I2 433 aa6.65□□□□□ -1.34
SMG6-210ENST00000572205 TTC9CQ8N5M4 171 aa6.65□□□□□ -1.34
SMG6-210ENST00000572205 TMEM229BQ8NBD8 167 aa6.65□□□□□ -1.34
SMG6-210ENST00000572205 OR13C8Q8NGS7 320 aa6.65□□□□□ -1.34
SMG6-210ENST00000572205 DCUN1D4Q92564 292 aa6.65□□□□□ -1.34
SMG6-210ENST00000572205 SEC22AQ96IW7 307 aa6.65□□□□□ -1.34
SMG6-210ENST00000572205 AKIP1Q9NQ31 210 aa6.65□□□□□ -1.34
SMG6-210ENST00000572205 SLC2A9Q9NRM0 540 aa6.65□□□□□ -1.34
SMG6-210ENST00000572205 FAM212BQ9NTI7 297 aaPredicted RBP6.65□□□□□ -1.34
SMG6-210ENST00000572205 IGLV11-55A0A075B6I3 123 aa6.64□□□□□ -1.35
SMG6-210ENST00000572205 A0A0G2JRQ6 117 aa6.64□□□□□ -1.35
SMG6-210ENST00000572205 ANKRD20A5PA0PJZ0 165 aa6.64□□□□□ -1.35
SMG6-210ENST00000572205 FAM25AB3EWG3 89 aa6.64□□□□□ -1.35
SMG6-210ENST00000572205 FAM25CB3EWG5 89 aa6.64□□□□□ -1.35
SMG6-210ENST00000572205 FAM25GB3EWG6 89 aa6.64□□□□□ -1.35
SMG6-210ENST00000572205 ZNF701M0R085 212 aaPredicted RBP6.64□□□□□ -1.35
SMG6-210ENST00000572205 BMPR1BO00238 502 aa6.64□□□□□ -1.35
SMG6-210ENST00000572205 IGKV1-5P01602 117 aa6.64□□□□□ -1.35
SMG6-210ENST00000572205 TRGV3P03979 118 aa6.64□□□□□ -1.35
SMG6-210ENST00000572205 OR8U8P0C7N1 319 aa6.64□□□□□ -1.35
SMG6-210ENST00000572205 NQO2P16083 231 aa6.64□□□□□ -1.35
SMG6-210ENST00000572205 HLA-GP17693 338 aa6.64□□□□□ -1.35
SMG6-210ENST00000572205 PI3P19957 117 aa6.64□□□□□ -1.35
SMG6-210ENST00000572205 TNFSF8P32971 234 aa6.64□□□□□ -1.35
SMG6-210ENST00000572205 RPL27AP46776 148 aaKnown RBP6.64□□□□□ -1.35
SMG6-210ENST00000572205 RPL8P62917 257 aaKnown RBP6.64□□□□□ -1.35
SMG6-210ENST00000572205 SSBP1Q04837 148 aaKnown RBP6.64□□□□□ -1.35
SMG6-210ENST00000572205 WT1-ASQ06250 92 aa6.64□□□□□ -1.35
SMG6-210ENST00000572205 TMEM267Q0VDI3 215 aaPredicted RBP6.64□□□□□ -1.35
SMG6-210ENST00000572205 CATR1Q13166 79 aa6.64□□□□□ -1.35
SMG6-210ENST00000572205 CBX3Q13185 183 aa6.64□□□□□ -1.35
SMG6-210ENST00000572205 PHLDA2Q53GA4 152 aa6.64□□□□□ -1.35
SMG6-210ENST00000572205 ADAMTSL5Q6ZMM2 481 aa6.64□□□□□ -1.35
SMG6-210ENST00000572205 TBC1D26Q86UD7 250 aa6.64□□□□□ -1.35
SMG6-210ENST00000572205 CCDC190Q86UF4 302 aa6.64□□□□□ -1.35
SMG6-210ENST00000572205 OR4C16Q8NGL9 310 aa6.64□□□□□ -1.35
SMG6-210ENST00000572205 OR1N2Q8NGR9 330 aa6.64□□□□□ -1.35
SMG6-210ENST00000572205 OR6F1Q8NGZ6 308 aa6.64□□□□□ -1.35
SMG6-210ENST00000572205 OR4A5Q8NH83 315 aa6.64□□□□□ -1.35
SMG6-210ENST00000572205 ABHD5Q8WTS1 349 aa6.64□□□□□ -1.35
SMG6-210ENST00000572205 DGCR14Q96DF8 476 aaKnown RBP6.64□□□□□ -1.35
SMG6-210ENST00000572205 TMEM68Q96MH6 324 aa6.64□□□□□ -1.35
SMG6-210ENST00000572205 TP53RKQ96S44 253 aa6.64□□□□□ -1.35
SMG6-210ENST00000572205 THAP7Q9BT49 309 aaPredicted RBP6.64□□□□□ -1.35
SMG6-210ENST00000572205 SLC2A8Q9NY64 477 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms