RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 NDUFB8O95169 186 aa13.59□□□□□ -0.23
CTDNEP1-207ENST00000572043 PSMB6P28072 239 aa13.59□□□□□ -0.23
CTDNEP1-207ENST00000572043 LPAR6P43657 344 aa13.59□□□□□ -0.23
CTDNEP1-207ENST00000572043 ALDH3B2P48448 385 aa13.59□□□□□ -0.23
CTDNEP1-207ENST00000572043 ERVK-16P61578 105 aa13.59□□□□□ -0.23
CTDNEP1-207ENST00000572043 CMTM1Q8IZ96 169 aa13.59□□□□□ -0.23
CTDNEP1-207ENST00000572043 CD300LFQ8TDQ1 290 aa13.59□□□□□ -0.23
CTDNEP1-207ENST00000572043 PLEKHA2Q9HB19 425 aa13.59□□□□□ -0.23
CTDNEP1-207ENST00000572043 SMAD5-AS1Q9Y6J3 95 aa13.59□□□□□ -0.23
CTDNEP1-207ENST00000572043 PPP5D1E7EU14 171 aa13.58□□□□□ -0.24
CTDNEP1-207ENST00000572043 BMPR1BO00238 502 aa13.58□□□□□ -0.24
CTDNEP1-207ENST00000572043 DEFA4P12838 97 aa13.58□□□□□ -0.24
CTDNEP1-207ENST00000572043 OR2B8PP59922 312 aa13.58□□□□□ -0.24
CTDNEP1-207ENST00000572043 SPCS2Q15005 226 aa13.58□□□□□ -0.24
CTDNEP1-207ENST00000572043 TATDN3Q17R31 274 aa13.58□□□□□ -0.24
CTDNEP1-207ENST00000572043 CLVS1Q8IUQ0 354 aaPredicted RBP13.58□□□□□ -0.24
CTDNEP1-207ENST00000572043 FCAMRQ8WWV6 532 aa13.58□□□□□ -0.24
CTDNEP1-207ENST00000572043 DGCR14Q96DF8 476 aaKnown RBP13.58□□□□□ -0.24
CTDNEP1-207ENST00000572043 COMMD5Q9GZQ3 224 aa13.58□□□□□ -0.24
CTDNEP1-207ENST00000572043 COMMD9Q9P000 198 aa13.58□□□□□ -0.24
CTDNEP1-207ENST00000572043 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.57□□□□□ -0.24
CTDNEP1-207ENST00000572043 RGS5O15539 181 aa13.57□□□□□ -0.24
CTDNEP1-207ENST00000572043 KRASP01116 189 aa13.57□□□□□ -0.24
CTDNEP1-207ENST00000572043 HLA-AP01891 365 aaKnown RBP13.57□□□□□ -0.24
CTDNEP1-207ENST00000572043 F2RP25116 425 aa13.57□□□□□ -0.24
CTDNEP1-207ENST00000572043 G6PCP35575 357 aa13.57□□□□□ -0.24
CTDNEP1-207ENST00000572043 POU2AF1Q16633 256 aa13.57□□□□□ -0.24
CTDNEP1-207ENST00000572043 IL34Q6ZMJ4 242 aa13.57□□□□□ -0.24
CTDNEP1-207ENST00000572043 OR52I2Q8NH67 350 aa13.57□□□□□ -0.24
CTDNEP1-207ENST00000572043 FANCD2OSQ96PS1 177 aa13.57□□□□□ -0.24
CTDNEP1-207ENST00000572043 KLK11Q9UBX7 282 aa13.57□□□□□ -0.24
CTDNEP1-207ENST00000572043 NSG2Q9Y328 171 aa13.57□□□□□ -0.24
CTDNEP1-207ENST00000572043 MARCH11A6NNE9 402 aa13.56□□□□□ -0.24
CTDNEP1-207ENST00000572043 DHFRP00374 187 aa13.56□□□□□ -0.24
CTDNEP1-207ENST00000572043 IGLV1-51P01701 117 aa13.56□□□□□ -0.24
CTDNEP1-207ENST00000572043 CRYGCP07315 174 aa13.56□□□□□ -0.24
CTDNEP1-207ENST00000572043 CSN3P07498 182 aa13.56□□□□□ -0.24
CTDNEP1-207ENST00000572043 CTRB1P17538 263 aa13.56□□□□□ -0.24
CTDNEP1-207ENST00000572043 ZNF585BQ52M93 769 aa13.56□□□□□ -0.24
CTDNEP1-207ENST00000572043 CTRB2Q6GPI1 263 aa13.56□□□□□ -0.24
CTDNEP1-207ENST00000572043 TBC1D26Q86UD7 250 aa13.56□□□□□ -0.24
CTDNEP1-207ENST00000572043 OR10W1Q8NGF6 305 aa13.56□□□□□ -0.24
CTDNEP1-207ENST00000572043 ABHD1Q96SE0 405 aa13.56□□□□□ -0.24
CTDNEP1-207ENST00000572043 HINT2Q9BX68 163 aa13.56□□□□□ -0.24
CTDNEP1-207ENST00000572043 OR2C1O95371 312 aa13.55□□□□□ -0.24
CTDNEP1-207ENST00000572043 CLEC19AQ6UXS0 136 aa13.55□□□□□ -0.24
CTDNEP1-207ENST00000572043 LAX1Q8IWV1 398 aa13.55□□□□□ -0.24
CTDNEP1-207ENST00000572043 MIXL1Q9H2W2 232 aa13.55□□□□□ -0.24
CTDNEP1-207ENST00000572043 ZC4H2Q9NQZ6 224 aa13.55□□□□□ -0.24
CTDNEP1-207ENST00000572043 TEX50A0A1B0GTY4 177 aa13.54□□□□□ -0.24
CTDNEP1-207ENST00000572043 IGLC7A0M8Q6 106 aa13.54□□□□□ -0.24
CTDNEP1-207ENST00000572043 CTDSP2O14595 271 aa13.54□□□□□ -0.24
CTDNEP1-207ENST00000572043 CD3DP04234 171 aa13.54□□□□□ -0.24
CTDNEP1-207ENST00000572043 IFNA6P05013 189 aa13.54□□□□□ -0.24
CTDNEP1-207ENST00000572043 PGAM2P15259 253 aa13.54□□□□□ -0.24
CTDNEP1-207ENST00000572043 S100GP29377 79 aa13.54□□□□□ -0.24
CTDNEP1-207ENST00000572043 RNASE10Q5GAN6 216 aaKnown RBP13.54□□□□□ -0.24
CTDNEP1-207ENST00000572043 LPCAT3Q6P1A2 487 aa13.54□□□□□ -0.24
CTDNEP1-207ENST00000572043 EEF1AKMT3Q96AZ1 226 aa13.54□□□□□ -0.24
CTDNEP1-207ENST00000572043 CCDC140Q96MF4 163 aa13.54□□□□□ -0.24
CTDNEP1-207ENST00000572043 QTRT1Q9BXR0 403 aaKnown RBP13.54□□□□□ -0.24
CTDNEP1-207ENST00000572043 PEMTQ9UBM1 199 aa13.54□□□□□ -0.24
CTDNEP1-207ENST00000572043 IGLV11-55A0A075B6I3 123 aa13.53□□□□□ -0.24
CTDNEP1-207ENST00000572043 MFSD2BA6NFX1 497 aa13.53□□□□□ -0.24
CTDNEP1-207ENST00000572043 SNAPC5O75971 98 aa13.53□□□□□ -0.24
CTDNEP1-207ENST00000572043 NHLRC4P0CG21 123 aaPredicted RBP13.53□□□□□ -0.24
CTDNEP1-207ENST00000572043 TRAPPC2P0DI81 140 aa13.53□□□□□ -0.24
CTDNEP1-207ENST00000572043 TRAPPC2BP0DI82 140 aa13.53□□□□□ -0.24
CTDNEP1-207ENST00000572043 HIST1H1BP16401 226 aaKnown RBP13.53□□□□□ -0.24
CTDNEP1-207ENST00000572043 PI3P19957 117 aa13.53□□□□□ -0.24
CTDNEP1-207ENST00000572043 EDN2P20800 178 aa13.53□□□□□ -0.24
CTDNEP1-207ENST00000572043 ARL3P36405 182 aa13.53□□□□□ -0.24
CTDNEP1-207ENST00000572043 SLC38A6Q8IZM9 456 aa13.53□□□□□ -0.24
CTDNEP1-207ENST00000572043 OR51B2Q9Y5P1 312 aa13.53□□□□□ -0.24
CTDNEP1-207ENST00000572043 DMRT1Q9Y5R6 373 aa13.53□□□□□ -0.24
CTDNEP1-207ENST00000572043 GGCTO75223 188 aaKnown RBP13.52□□□□□ -0.25
CTDNEP1-207ENST00000572043 FRMD6-AS1P0C7T7 363 aa13.52□□□□□ -0.25
CTDNEP1-207ENST00000572043 OR13C7P0DN81 318 aa13.52□□□□□ -0.25
CTDNEP1-207ENST00000572043 PPP5CP53041 499 aa13.52□□□□□ -0.25
CTDNEP1-207ENST00000572043 UCP3P55916 312 aa13.52□□□□□ -0.25
CTDNEP1-207ENST00000572043 SBSPONQ8IVN8 264 aa13.52□□□□□ -0.25
CTDNEP1-207ENST00000572043 OR4D10Q8NGI6 311 aa13.52□□□□□ -0.25
CTDNEP1-207ENST00000572043 MTFP1Q9UDX5 166 aa13.52□□□□□ -0.25
CTDNEP1-207ENST00000572043 SELENOKQ9Y6D0 94 aa13.52□□□□□ -0.25
CTDNEP1-207ENST00000572043 U3KQK5 164 aa13.52□□□□□ -0.25
CTDNEP1-207ENST00000572043 IZUMO1RA6ND01 250 aa13.51□□□□□ -0.25
CTDNEP1-207ENST00000572043 H0Y980 276 aa13.51□□□□□ -0.25
CTDNEP1-207ENST00000572043 WT1-ASQ06250 92 aa13.51□□□□□ -0.25
CTDNEP1-207ENST00000572043 OR1L8Q8NGR8 309 aa13.51□□□□□ -0.25
CTDNEP1-207ENST00000572043 DYNLRB2Q8TF09 96 aa13.51□□□□□ -0.25
CTDNEP1-207ENST00000572043 RAB2BQ8WUD1 216 aa13.51□□□□□ -0.25
CTDNEP1-207ENST00000572043 MRGPRFQ96AM1 343 aa13.51□□□□□ -0.25
CTDNEP1-207ENST00000572043 IGHV3-21A0A0B4J1V1 117 aa13.5□□□□□ -0.25
CTDNEP1-207ENST00000572043 ZNF320A2RRD8 509 aa13.5□□□□□ -0.25
CTDNEP1-207ENST00000572043 DBX1A6NMT0 343 aa13.5□□□□□ -0.25
CTDNEP1-207ENST00000572043 GPR183P32249 361 aa13.5□□□□□ -0.25
CTDNEP1-207ENST00000572043 MECP2P51608 486 aaKnown RBP13.5□□□□□ -0.25
CTDNEP1-207ENST00000572043 SCGB2B2Q4G0G5 96 aa13.5□□□□□ -0.25
CTDNEP1-207ENST00000572043 FAM209BQ5JX69 171 aa13.5□□□□□ -0.25
CTDNEP1-207ENST00000572043 SLC25A24Q6NUK1 477 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms