RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 CD83Q01151 205 aa10.41□□□□□ -0.74
CCDC40-205ENST00000571028 RBMS2Q15434 407 aaKnown RBP10.41□□□□□ -0.74
CCDC40-205ENST00000571028 C10orf55Q5SWW7 151 aa10.41□□□□□ -0.74
CCDC40-205ENST00000571028 ZNF562Q6V9R5 426 aa10.41□□□□□ -0.74
CCDC40-205ENST00000571028 PUSL1Q8N0Z8 303 aaKnown RBP10.41□□□□□ -0.74
CCDC40-205ENST00000571028 TCTEX1D1Q8N7M0 179 aa10.41□□□□□ -0.74
CCDC40-205ENST00000571028 RNASE11Q8TAA1 199 aaKnown RBP10.41□□□□□ -0.74
CCDC40-205ENST00000571028 VSTM2AQ8TAG5 236 aa10.41□□□□□ -0.74
CCDC40-205ENST00000571028 WIPF2Q8TF74 440 aaPredicted RBP10.41□□□□□ -0.74
CCDC40-205ENST00000571028 ARPC1AQ92747 370 aa10.41□□□□□ -0.74
CCDC40-205ENST00000571028 TMEM230Q96A57 120 aa10.41□□□□□ -0.74
CCDC40-205ENST00000571028 SLC25A21Q9BQT8 299 aaPredicted RBP10.41□□□□□ -0.74
CCDC40-205ENST00000571028 C7orf50Q9BRJ6 194 aaKnown RBP10.41□□□□□ -0.74
CCDC40-205ENST00000571028 COMMD9Q9P000 198 aa10.41□□□□□ -0.74
CCDC40-205ENST00000571028 KCNIP3Q9Y2W7 256 aa10.41□□□□□ -0.74
CCDC40-205ENST00000571028 MSGN1A6NI15 193 aa10.4□□□□□ -0.74
CCDC40-205ENST00000571028 UPK2O00526 184 aa10.4□□□□□ -0.74
CCDC40-205ENST00000571028 CREBL2O60519 120 aaPredicted RBP10.4□□□□□ -0.74
CCDC40-205ENST00000571028 NDUFB6O95139 128 aa10.4□□□□□ -0.74
CCDC40-205ENST00000571028 IGKV1-39P01597 117 aa10.4□□□□□ -0.74
CCDC40-205ENST00000571028 IGKV1D-39P04432 117 aa10.4□□□□□ -0.74
CCDC40-205ENST00000571028 EGR2P11161 476 aaPredicted RBP10.4□□□□□ -0.74
CCDC40-205ENST00000571028 BTCP35070 178 aa10.4□□□□□ -0.74
CCDC40-205ENST00000571028 IFITM3Q01628 133 aa10.4□□□□□ -0.74
CCDC40-205ENST00000571028 IZUMO4Q1ZYL8 232 aa10.4□□□□□ -0.74
CCDC40-205ENST00000571028 MRGPRG-AS1Q2M3A8 158 aa10.4□□□□□ -0.74
CCDC40-205ENST00000571028 LCNL1Q6ZST4 164 aa10.4□□□□□ -0.74
CCDC40-205ENST00000571028 H2BFWTQ7Z2G1 175 aa10.4□□□□□ -0.74
CCDC40-205ENST00000571028 ZNF695Q8IW36 515 aa10.4□□□□□ -0.74
CCDC40-205ENST00000571028 MMD2Q8IY49 270 aa10.4□□□□□ -0.74
CCDC40-205ENST00000571028 CENPSQ8N2Z9 138 aa10.4□□□□□ -0.74
CCDC40-205ENST00000571028 LFNGQ8NES3 379 aa10.4□□□□□ -0.74
CCDC40-205ENST00000571028 OR4X2Q8NGF9 303 aa10.4□□□□□ -0.74
CCDC40-205ENST00000571028 TMEM167AQ8TBQ9 72 aa10.4□□□□□ -0.74
CCDC40-205ENST00000571028 FYTTD1Q96QD9 318 aaKnown RBP10.4□□□□□ -0.74
CCDC40-205ENST00000571028 ZNF355PQ9NSJ1 428 aa10.4□□□□□ -0.74
CCDC40-205ENST00000571028 A0A1W2PN81 502 aa10.39□□□□□ -0.75
CCDC40-205ENST00000571028 SNAPC5O75971 98 aa10.39□□□□□ -0.75
CCDC40-205ENST00000571028 OR9G9P0C7N8 305 aa10.39□□□□□ -0.75
CCDC40-205ENST00000571028 CHRNA7P36544 502 aa10.39□□□□□ -0.75
CCDC40-205ENST00000571028 AKR1C2P52895 323 aa10.39□□□□□ -0.75
CCDC40-205ENST00000571028 OR2B8PP59922 312 aa10.39□□□□□ -0.75
CCDC40-205ENST00000571028 RPL8P62917 257 aaKnown RBP10.39□□□□□ -0.75
CCDC40-205ENST00000571028 CASC10Q5T4H9 136 aa10.39□□□□□ -0.75
CCDC40-205ENST00000571028 MZT2BQ6NZ67 158 aa10.39□□□□□ -0.75
CCDC40-205ENST00000571028 OR5T1Q8NG75 326 aa10.39□□□□□ -0.75
CCDC40-205ENST00000571028 OR4A5Q8NH83 315 aa10.39□□□□□ -0.75
CCDC40-205ENST00000571028 MUC7Q8TAX7 377 aa10.39□□□□□ -0.75
CCDC40-205ENST00000571028 CASTOR1Q8WTX7 329 aa10.39□□□□□ -0.75
CCDC40-205ENST00000571028 SRSF12Q8WXF0 261 aaKnown RBP10.39□□□□□ -0.75
CCDC40-205ENST00000571028 MCRIP2Q9BUT9 160 aaKnown RBP10.39□□□□□ -0.75
CCDC40-205ENST00000571028 HINT2Q9BX68 163 aa10.39□□□□□ -0.75
CCDC40-205ENST00000571028 GON7Q9BXV9 100 aa10.39□□□□□ -0.75
CCDC40-205ENST00000571028 PALMDQ9NP74 551 aa10.39□□□□□ -0.75
CCDC40-205ENST00000571028 BET1LQ9NYM9 111 aa10.39□□□□□ -0.75
CCDC40-205ENST00000571028 TBC1D24Q9ULP9 559 aa10.39□□□□□ -0.75
CCDC40-205ENST00000571028 BIRC6Q9NR09 4857 aa10.38□□□□□ -0.75
CCDC40-205ENST00000571028 HMX3A6NHT5 357 aa10.38□□□□□ -0.75
CCDC40-205ENST00000571028 RBMXL2O75526 392 aaKnown RBP10.38□□□□□ -0.75
CCDC40-205ENST00000571028 IGF1P05019 195 aa10.38□□□□□ -0.75
CCDC40-205ENST00000571028 HLA-GP17693 338 aa10.38□□□□□ -0.75
CCDC40-205ENST00000571028 UCP1P25874 307 aa10.38□□□□□ -0.75
CCDC40-205ENST00000571028 RPL27AP46776 148 aaKnown RBP10.38□□□□□ -0.75
CCDC40-205ENST00000571028 SSBP2P81877 361 aaPredicted RBP10.38□□□□□ -0.75
CCDC40-205ENST00000571028 DHODHQ02127 395 aa10.38□□□□□ -0.75
CCDC40-205ENST00000571028 TMEM267Q0VDI3 215 aaPredicted RBP10.38□□□□□ -0.75
CCDC40-205ENST00000571028 TMEM268Q5VZI3 342 aa10.38□□□□□ -0.75
CCDC40-205ENST00000571028 GLYATL2Q8WU03 294 aa10.38□□□□□ -0.75
CCDC40-205ENST00000571028 SEC22AQ96IW7 307 aa10.38□□□□□ -0.75
CCDC40-205ENST00000571028 MS4A10Q96PG2 267 aa10.38□□□□□ -0.75
CCDC40-205ENST00000571028 TSC22D3Q99576 134 aa10.38□□□□□ -0.75
CCDC40-205ENST00000571028 TMEM222Q9H0R3 208 aa10.38□□□□□ -0.75
CCDC40-205ENST00000571028 NUBP2Q9Y5Y2 271 aa10.38□□□□□ -0.75
CCDC40-205ENST00000571028 TRAV6A0A075B6T7 132 aa10.37□□□□□ -0.75
CCDC40-205ENST00000571028 FAM240BA0A1B0GVZ2 78 aa10.37□□□□□ -0.75
CCDC40-205ENST00000571028 ATG12O94817 140 aa10.37□□□□□ -0.75
CCDC40-205ENST00000571028 IGKV1-5P01602 117 aa10.37□□□□□ -0.75
CCDC40-205ENST00000571028 TCRBP04435 133 aa10.37□□□□□ -0.75
CCDC40-205ENST00000571028 ANXA3P12429 323 aa10.37□□□□□ -0.75
CCDC40-205ENST00000571028 ANXA7P20073 488 aaKnown RBP10.37□□□□□ -0.75
CCDC40-205ENST00000571028 RAB25P57735 213 aa10.37□□□□□ -0.75
CCDC40-205ENST00000571028 SUPT4H1P63272 117 aaKnown RBP10.37□□□□□ -0.75
CCDC40-205ENST00000571028 ASAH1Q13510 395 aa10.37□□□□□ -0.75
CCDC40-205ENST00000571028 PPP1R1AQ13522 171 aa10.37□□□□□ -0.75
CCDC40-205ENST00000571028 TMEM187Q14656 261 aa10.37□□□□□ -0.75
CCDC40-205ENST00000571028 POU2AF1Q16633 256 aa10.37□□□□□ -0.75
CCDC40-205ENST00000571028 TCTEX1D4Q5JR98 221 aa10.37□□□□□ -0.75
CCDC40-205ENST00000571028 TEX38Q6PEX7 206 aa10.37□□□□□ -0.75
CCDC40-205ENST00000571028 TMEM65Q6PI78 240 aa10.37□□□□□ -0.75
CCDC40-205ENST00000571028 SELENOHQ8IZQ5 122 aaKnown RBP10.37□□□□□ -0.75
CCDC40-205ENST00000571028 OR4A16Q8NH70 328 aa10.37□□□□□ -0.75
CCDC40-205ENST00000571028 LHFPL5Q8TAF8 219 aa10.37□□□□□ -0.75
CCDC40-205ENST00000571028 RRNAD1Q96FB5 475 aaKnown RBP10.37□□□□□ -0.75
CCDC40-205ENST00000571028 COMMD5Q9GZQ3 224 aa10.37□□□□□ -0.75
CCDC40-205ENST00000571028 FAM212BQ9NTI7 297 aaPredicted RBP10.37□□□□□ -0.75
CCDC40-205ENST00000571028 OR51B2Q9Y5P1 312 aa10.37□□□□□ -0.75
CCDC40-205ENST00000571028 EPPK1P58107 5090 aaKnown RBP10.37□□□□□ -0.75
CCDC40-205ENST00000571028 E7EUB6 86 aa10.36□□□□□ -0.75
CCDC40-205ENST00000571028 B3GALNT1O75752 331 aa10.36□□□□□ -0.75
CCDC40-205ENST00000571028 SFT2D2O95562 160 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms