RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 BORCS5Q969J3 196 aa9.43□□□□□ -0.9
CTDNEP1-205ENST00000570828 RCHY1Q96PM5 261 aa9.43□□□□□ -0.9
CTDNEP1-205ENST00000570828 ZMAT4Q9H898 229 aa9.43□□□□□ -0.9
CTDNEP1-205ENST00000570828 HRASLSQ9HDD0 168 aa9.43□□□□□ -0.9
CTDNEP1-205ENST00000570828 PEMTQ9UBM1 199 aa9.43□□□□□ -0.9
CTDNEP1-205ENST00000570828 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.42□□□□□ -0.9
CTDNEP1-205ENST00000570828 NPIPB5A8MRT5 1133 aa9.42□□□□□ -0.9
CTDNEP1-205ENST00000570828 BMPR1BO00238 502 aa9.42□□□□□ -0.9
CTDNEP1-205ENST00000570828 RBFOX2O43251 390 aaKnown RBP eCLIP9.42□□□□□ -0.9
CTDNEP1-205ENST00000570828 DHFRP00374 187 aa9.42□□□□□ -0.9
CTDNEP1-205ENST00000570828 IGHV4-30-4P0DP06 118 aa9.42□□□□□ -0.9
CTDNEP1-205ENST00000570828 RPS19P39019 145 aaKnown RBP9.42□□□□□ -0.9
CTDNEP1-205ENST00000570828 AADACL3Q5VUY0 350 aa9.42□□□□□ -0.9
CTDNEP1-205ENST00000570828 IL34Q6ZMJ4 242 aa9.42□□□□□ -0.9
CTDNEP1-205ENST00000570828 GTSCR1Q86UQ5 136 aa9.42□□□□□ -0.9
CTDNEP1-205ENST00000570828 Q8N402 240 aa9.42□□□□□ -0.9
CTDNEP1-205ENST00000570828 OR51H1Q8NH63 302 aa9.42□□□□□ -0.9
CTDNEP1-205ENST00000570828 OR4A5Q8NH83 315 aa9.42□□□□□ -0.9
CTDNEP1-205ENST00000570828 GIMAP1Q8WWP7 306 aa9.42□□□□□ -0.9
CTDNEP1-205ENST00000570828 YIPF6Q96EC8 236 aa9.42□□□□□ -0.9
CTDNEP1-205ENST00000570828 SLC2A9Q9NRM0 540 aa9.42□□□□□ -0.9
CTDNEP1-205ENST00000570828 BET1LQ9NYM9 111 aa9.42□□□□□ -0.9
CTDNEP1-205ENST00000570828 SIGLEC8Q9NYZ4 499 aa9.42□□□□□ -0.9
CTDNEP1-205ENST00000570828 EHFQ9NZC4 300 aa9.42□□□□□ -0.9
CTDNEP1-205ENST00000570828 HUWE1Q7Z6Z7 4374 aaKnown RBP9.41□□□□□ -0.9
CTDNEP1-205ENST00000570828 CSN3P07498 182 aa9.41□□□□□ -0.9
CTDNEP1-205ENST00000570828 IL6RP08887 468 aaPredicted RBP9.41□□□□□ -0.9
CTDNEP1-205ENST00000570828 ZNF735P0CB33 412 aa9.41□□□□□ -0.9
CTDNEP1-205ENST00000570828 AREGP15514 252 aa9.41□□□□□ -0.9
CTDNEP1-205ENST00000570828 HLA-GP17693 338 aa9.41□□□□□ -0.9
CTDNEP1-205ENST00000570828 TAS2R31P59538 309 aa9.41□□□□□ -0.9
CTDNEP1-205ENST00000570828 TAS2R46P59540 309 aa9.41□□□□□ -0.9
CTDNEP1-205ENST00000570828 TAS2R20P59543 309 aa9.41□□□□□ -0.9
CTDNEP1-205ENST00000570828 OR4A47Q6IF82 309 aa9.41□□□□□ -0.9
CTDNEP1-205ENST00000570828 MZT2BQ6NZ67 158 aa9.41□□□□□ -0.9
CTDNEP1-205ENST00000570828 ZNF818PQ6ZRF7 136 aa9.41□□□□□ -0.9
CTDNEP1-205ENST00000570828 C19orf35Q6ZS72 473 aa9.41□□□□□ -0.9
CTDNEP1-205ENST00000570828 CD300LFQ8TDQ1 290 aa9.41□□□□□ -0.9
CTDNEP1-205ENST00000570828 FBXL7Q9UJT9 491 aa9.41□□□□□ -0.9
CTDNEP1-205ENST00000570828 A0A1B0GW64 132 aa9.4□□□□□ -0.9
CTDNEP1-205ENST00000570828 PPP5D1E7EU14 171 aa9.4□□□□□ -0.9
CTDNEP1-205ENST00000570828 E7EUB6 86 aa9.4□□□□□ -0.9
CTDNEP1-205ENST00000570828 HPRT1P00492 218 aa9.4□□□□□ -0.9
CTDNEP1-205ENST00000570828 DEFA4P12838 97 aa9.4□□□□□ -0.9
CTDNEP1-205ENST00000570828 NQO2P16083 231 aa9.4□□□□□ -0.9
CTDNEP1-205ENST00000570828 PSMB6P28072 239 aa9.4□□□□□ -0.9
CTDNEP1-205ENST00000570828 Q8N1Y9 231 aa9.4□□□□□ -0.9
CTDNEP1-205ENST00000570828 DMBX1Q8NFW5 382 aa9.4□□□□□ -0.9
CTDNEP1-205ENST00000570828 OR2K2Q8NGT1 345 aa9.4□□□□□ -0.9
CTDNEP1-205ENST00000570828 OR5H2Q8NGV7 314 aa9.4□□□□□ -0.9
CTDNEP1-205ENST00000570828 DYNLRB2Q8TF09 96 aa9.4□□□□□ -0.9
CTDNEP1-205ENST00000570828 SLC25A46Q96AG3 418 aa9.4□□□□□ -0.9
CTDNEP1-205ENST00000570828 TNCP24821 2201 aa9.4□□□□□ -0.91
CTDNEP1-205ENST00000570828 A8MZ25 164 aa9.39□□□□□ -0.91
CTDNEP1-205ENST00000570828 C3orf84H3BNL1 204 aa9.39□□□□□ -0.91
CTDNEP1-205ENST00000570828 GGCTO75223 188 aaKnown RBP9.39□□□□□ -0.91
CTDNEP1-205ENST00000570828 S1PR2O95136 353 aa9.39□□□□□ -0.91
CTDNEP1-205ENST00000570828 PMP2P02689 132 aa9.39□□□□□ -0.91
CTDNEP1-205ENST00000570828 RLN1P04808 185 aa9.39□□□□□ -0.91
CTDNEP1-205ENST00000570828 REG1AP05451 166 aa9.39□□□□□ -0.91
CTDNEP1-205ENST00000570828 CRYGCP07315 174 aa9.39□□□□□ -0.91
CTDNEP1-205ENST00000570828 MYOD1P15172 320 aa9.39□□□□□ -0.91
CTDNEP1-205ENST00000570828 HIST1H1BP16401 226 aaKnown RBP9.39□□□□□ -0.91
CTDNEP1-205ENST00000570828 CTRB1P17538 263 aa9.39□□□□□ -0.91
CTDNEP1-205ENST00000570828 PRSS3P35030 304 aa9.39□□□□□ -0.91
CTDNEP1-205ENST00000570828 ERVK-16P61578 105 aa9.39□□□□□ -0.91
CTDNEP1-205ENST00000570828 CTRB2Q6GPI1 263 aa9.39□□□□□ -0.91
CTDNEP1-205ENST00000570828 EEF1AKMT3Q96AZ1 226 aa9.39□□□□□ -0.91
CTDNEP1-205ENST00000570828 MOB3AQ96BX8 217 aa9.39□□□□□ -0.91
CTDNEP1-205ENST00000570828 FANCD2OSQ96PS1 177 aa9.39□□□□□ -0.91
CTDNEP1-205ENST00000570828 ZNF2Q9BSG1 426 aaPredicted RBP9.39□□□□□ -0.91
CTDNEP1-205ENST00000570828 COMMD5Q9GZQ3 224 aa9.39□□□□□ -0.91
CTDNEP1-205ENST00000570828 PLEKHA2Q9HB19 425 aa9.39□□□□□ -0.91
CTDNEP1-205ENST00000570828 TMEM140Q9NV12 185 aa9.39□□□□□ -0.91
CTDNEP1-205ENST00000570828 COMMD9Q9P000 198 aa9.39□□□□□ -0.91
CTDNEP1-205ENST00000570828 ANAPC10Q9UM13 185 aa9.39□□□□□ -0.91
CTDNEP1-205ENST00000570828 J3KRW8 73 aa9.38□□□□□ -0.91
CTDNEP1-205ENST00000570828 UPK2O00526 184 aa9.38□□□□□ -0.91
CTDNEP1-205ENST00000570828 NDUFB8O95169 186 aa9.38□□□□□ -0.91
CTDNEP1-205ENST00000570828 IGHV3-23P01764 117 aa9.38□□□□□ -0.91
CTDNEP1-205ENST00000570828 HLA-AP01891 365 aaKnown RBP9.38□□□□□ -0.91
CTDNEP1-205ENST00000570828 GNRHRP30968 328 aa9.38□□□□□ -0.91
CTDNEP1-205ENST00000570828 ARL3P36405 182 aa9.38□□□□□ -0.91
CTDNEP1-205ENST00000570828 RFX2P48378 723 aa9.38□□□□□ -0.91
CTDNEP1-205ENST00000570828 OR2B8PP59922 312 aa9.38□□□□□ -0.91
CTDNEP1-205ENST00000570828 NCS1P62166 190 aa9.38□□□□□ -0.91
CTDNEP1-205ENST00000570828 SUMO1P63165 101 aaKnown RBP9.38□□□□□ -0.91
CTDNEP1-205ENST00000570828 POU2AF1Q16633 256 aa9.38□□□□□ -0.91
CTDNEP1-205ENST00000570828 DHRS11Q6UWP2 260 aa9.38□□□□□ -0.91
CTDNEP1-205ENST00000570828 CLEC19AQ6UXS0 136 aa9.38□□□□□ -0.91
CTDNEP1-205ENST00000570828 CMTM1Q8IZ96 169 aa9.38□□□□□ -0.91
CTDNEP1-205ENST00000570828 CCDC140Q96MF4 163 aa9.38□□□□□ -0.91
CTDNEP1-205ENST00000570828 TM2D3Q9BRN9 247 aa9.38□□□□□ -0.91
CTDNEP1-205ENST00000570828 TUBA4BQ9H853 241 aa9.38□□□□□ -0.91
CTDNEP1-205ENST00000570828 C19orf73Q9NVV2 129 aa9.38□□□□□ -0.91
CTDNEP1-205ENST00000570828 COMMD3Q9UBI1 195 aa9.38□□□□□ -0.91
CTDNEP1-205ENST00000570828 S4R3C0 116 aa9.38□□□□□ -0.91
CTDNEP1-205ENST00000570828 TRAV3A0A0B4J244 114 aa9.37□□□□□ -0.91
CTDNEP1-205ENST00000570828 SMIM31A0A1B0GVY4 71 aa9.37□□□□□ -0.91
CTDNEP1-205ENST00000570828 IZUMO1RA6ND01 250 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms