RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 FXYD4P59646 89 aa12.96□□□□□ -0.33
MAP1LC3B-208ENST00000570189 HERV-K104P61576 105 aa12.96□□□□□ -0.33
MAP1LC3B-208ENST00000570189 SSX9Q7RTT3 188 aa12.96□□□□□ -0.33
MAP1LC3B-208ENST00000570189 CCDC140Q96MF4 163 aa12.96□□□□□ -0.33
MAP1LC3B-208ENST00000570189 FAM212BQ9NTI7 297 aaPredicted RBP12.96□□□□□ -0.33
MAP1LC3B-208ENST00000570189 FBXL7Q9UJT9 491 aa12.96□□□□□ -0.33
MAP1LC3B-208ENST00000570189 IGLC7A0M8Q6 106 aa12.95□□□□□ -0.34
MAP1LC3B-208ENST00000570189 MEIS3P1A6NDR6 274 aa12.95□□□□□ -0.34
MAP1LC3B-208ENST00000570189 PRSS3P35030 304 aa12.95□□□□□ -0.34
MAP1LC3B-208ENST00000570189 RFX2P48378 723 aa12.95□□□□□ -0.34
MAP1LC3B-208ENST00000570189 ADAMTSL5Q6ZMM2 481 aa12.95□□□□□ -0.34
MAP1LC3B-208ENST00000570189 HSD17B13Q7Z5P4 300 aaPredicted RBP12.95□□□□□ -0.34
MAP1LC3B-208ENST00000570189 TMEM17Q86X19 198 aa12.95□□□□□ -0.34
MAP1LC3B-208ENST00000570189 GPX8Q8TED1 209 aa12.95□□□□□ -0.34
MAP1LC3B-208ENST00000570189 FUNDC2Q9BWH2 189 aa12.95□□□□□ -0.34
MAP1LC3B-208ENST00000570189 SCPEP1Q9HB40 452 aa12.95□□□□□ -0.34
MAP1LC3B-208ENST00000570189 ZC4H2Q9NQZ6 224 aa12.95□□□□□ -0.34
MAP1LC3B-208ENST00000570189 RYR3Q15413 4870 aa12.95□□□□□ -0.34
MAP1LC3B-208ENST00000570189 TRBV7-1A0A0A6YYK4 115 aa12.94□□□□□ -0.34
MAP1LC3B-208ENST00000570189 A8MWP6 167 aa12.94□□□□□ -0.34
MAP1LC3B-208ENST00000570189 F2RP25116 425 aa12.94□□□□□ -0.34
MAP1LC3B-208ENST00000570189 LSM3P62310 102 aaKnown RBP12.94□□□□□ -0.34
MAP1LC3B-208ENST00000570189 AADACL3Q5VUY0 350 aa12.94□□□□□ -0.34
MAP1LC3B-208ENST00000570189 GTSCR1Q86UQ5 136 aa12.94□□□□□ -0.34
MAP1LC3B-208ENST00000570189 LYSMD2Q8IV50 215 aa12.94□□□□□ -0.34
MAP1LC3B-208ENST00000570189 OR5H2Q8NGV7 314 aa12.94□□□□□ -0.34
MAP1LC3B-208ENST00000570189 EEF1AKMT3Q96AZ1 226 aa12.94□□□□□ -0.34
MAP1LC3B-208ENST00000570189 CXorf58Q96LI9 332 aa12.94□□□□□ -0.34
MAP1LC3B-208ENST00000570189 ZNF2Q9BSG1 426 aaPredicted RBP12.94□□□□□ -0.34
MAP1LC3B-208ENST00000570189 HRASLSQ9HDD0 168 aa12.94□□□□□ -0.34
MAP1LC3B-208ENST00000570189 TMEM140Q9NV12 185 aa12.94□□□□□ -0.34
MAP1LC3B-208ENST00000570189 TECRQ9NZ01 308 aaKnown RBP12.94□□□□□ -0.34
MAP1LC3B-208ENST00000570189 PPP5D1E7EU14 171 aa12.93□□□□□ -0.34
MAP1LC3B-208ENST00000570189 S1PR2O95136 353 aa12.93□□□□□ -0.34
MAP1LC3B-208ENST00000570189 NDUFB8O95169 186 aa12.93□□□□□ -0.34
MAP1LC3B-208ENST00000570189 EIF4EP06730 217 aaKnown RBP12.93□□□□□ -0.34
MAP1LC3B-208ENST00000570189 C19orf35Q6ZS72 473 aa12.93□□□□□ -0.34
MAP1LC3B-208ENST00000570189 CMTM1Q8IZ96 169 aa12.93□□□□□ -0.34
MAP1LC3B-208ENST00000570189 OR51H1Q8NH63 302 aa12.93□□□□□ -0.34
MAP1LC3B-208ENST00000570189 CITED4Q96RK1 184 aa12.93□□□□□ -0.34
MAP1LC3B-208ENST00000570189 ATP6V0BQ99437 205 aa12.93□□□□□ -0.34
MAP1LC3B-208ENST00000570189 QTRT1Q9BXR0 403 aaKnown RBP12.93□□□□□ -0.34
MAP1LC3B-208ENST00000570189 COMMD5Q9GZQ3 224 aa12.93□□□□□ -0.34
MAP1LC3B-208ENST00000570189 FXYD6Q9H0Q3 95 aa12.93□□□□□ -0.34
MAP1LC3B-208ENST00000570189 TRAV3A0A0B4J244 114 aa12.92□□□□□ -0.34
MAP1LC3B-208ENST00000570189 IZUMO1RA6ND01 250 aa12.92□□□□□ -0.34
MAP1LC3B-208ENST00000570189 C2orf70A6NJV1 201 aa12.92□□□□□ -0.34
MAP1LC3B-208ENST00000570189 MARCH11A6NNE9 402 aa12.92□□□□□ -0.34
MAP1LC3B-208ENST00000570189 GPR31O00270 319 aa12.92□□□□□ -0.34
MAP1LC3B-208ENST00000570189 PGLYRP1O75594 196 aaPredicted RBP12.92□□□□□ -0.34
MAP1LC3B-208ENST00000570189 FCER2P06734 321 aa12.92□□□□□ -0.34
MAP1LC3B-208ENST00000570189 ARL3P36405 182 aa12.92□□□□□ -0.34
MAP1LC3B-208ENST00000570189 NCS1P62166 190 aa12.92□□□□□ -0.34
MAP1LC3B-208ENST00000570189 DEFB114Q30KQ6 69 aa12.92□□□□□ -0.34
MAP1LC3B-208ENST00000570189 DMBX1Q8NFW5 382 aa12.92□□□□□ -0.34
MAP1LC3B-208ENST00000570189 OR6F1Q8NGZ6 308 aa12.92□□□□□ -0.34
MAP1LC3B-208ENST00000570189 MUC7Q8TAX7 377 aa12.92□□□□□ -0.34
MAP1LC3B-208ENST00000570189 DGCR14Q96DF8 476 aaKnown RBP12.92□□□□□ -0.34
MAP1LC3B-208ENST00000570189 THYN1Q9P016 225 aa12.92□□□□□ -0.34
MAP1LC3B-208ENST00000570189 SMIM31A0A1B0GVY4 71 aa12.91□□□□□ -0.34
MAP1LC3B-208ENST00000570189 TPPPO94811 219 aa12.91□□□□□ -0.34
MAP1LC3B-208ENST00000570189 PMP2P02689 132 aa12.91□□□□□ -0.34
MAP1LC3B-208ENST00000570189 RLN1P04808 185 aa12.91□□□□□ -0.34
MAP1LC3B-208ENST00000570189 DEFA4P12838 97 aa12.91□□□□□ -0.34
MAP1LC3B-208ENST00000570189 MYOD1P15172 320 aa12.91□□□□□ -0.34
MAP1LC3B-208ENST00000570189 HRH1P35367 487 aa12.91□□□□□ -0.34
MAP1LC3B-208ENST00000570189 UCP3P55916 312 aa12.91□□□□□ -0.34
MAP1LC3B-208ENST00000570189 CD300EQ496F6 205 aaPredicted RBP12.91□□□□□ -0.34
MAP1LC3B-208ENST00000570189 LPCAT3Q6P1A2 487 aa12.91□□□□□ -0.34
MAP1LC3B-208ENST00000570189 LINC00322Q6ZN03 302 aaPredicted RBP12.91□□□□□ -0.34
MAP1LC3B-208ENST00000570189 GDPD1Q8N9F7 314 aa12.91□□□□□ -0.34
MAP1LC3B-208ENST00000570189 ZNF785A8K8V0 405 aa12.9□□□□□ -0.34
MAP1LC3B-208ENST00000570189 CYB5BO43169 146 aa12.9□□□□□ -0.34
MAP1LC3B-208ENST00000570189 OR2C1O95371 312 aa12.9□□□□□ -0.34
MAP1LC3B-208ENST00000570189 FOLR2P14207 255 aa12.9□□□□□ -0.34
MAP1LC3B-208ENST00000570189 PTBP1P26599 531 aaKnown RBP eCLIP12.9□□□□□ -0.34
MAP1LC3B-208ENST00000570189 ERVK-16P61578 105 aa12.9□□□□□ -0.34
MAP1LC3B-208ENST00000570189 VBP1P61758 197 aa12.9□□□□□ -0.34
MAP1LC3B-208ENST00000570189 FAM106AQ4KMX7 169 aa12.9□□□□□ -0.34
MAP1LC3B-208ENST00000570189 ZNF585BQ52M93 769 aa12.9□□□□□ -0.34
MAP1LC3B-208ENST00000570189 CLEC19AQ6UXS0 136 aa12.9□□□□□ -0.34
MAP1LC3B-208ENST00000570189 ZNF502Q8TBZ5 544 aa12.9□□□□□ -0.34
MAP1LC3B-208ENST00000570189 VN1R17PQ8TDU5 208 aa12.9□□□□□ -0.34
MAP1LC3B-208ENST00000570189 FCAMRQ8WWV6 532 aa12.9□□□□□ -0.34
MAP1LC3B-208ENST00000570189 SPATA25Q9BR10 227 aa12.9□□□□□ -0.34
MAP1LC3B-208ENST00000570189 NDUFA4L2Q9NRX3 87 aa12.9□□□□□ -0.34
MAP1LC3B-208ENST00000570189 COMMD3Q9UBI1 195 aa12.9□□□□□ -0.34
MAP1LC3B-208ENST00000570189 TEX50A0A1B0GTY4 177 aa12.89□□□□□ -0.35
MAP1LC3B-208ENST00000570189 TMEM213A2RRL7 107 aa12.89□□□□□ -0.35
MAP1LC3B-208ENST00000570189 MFSD2BA6NFX1 497 aa12.89□□□□□ -0.35
MAP1LC3B-208ENST00000570189 GABARAPO95166 117 aa12.89□□□□□ -0.35
MAP1LC3B-208ENST00000570189 REG1AP05451 166 aa12.89□□□□□ -0.35
MAP1LC3B-208ENST00000570189 SERPINE2P07093 398 aa12.89□□□□□ -0.35
MAP1LC3B-208ENST00000570189 TRAPPC2P0DI81 140 aa12.89□□□□□ -0.35
MAP1LC3B-208ENST00000570189 TRAPPC2BP0DI82 140 aa12.89□□□□□ -0.35
MAP1LC3B-208ENST00000570189 ELK1P19419 428 aa12.89□□□□□ -0.35
MAP1LC3B-208ENST00000570189 CBLN1P23435 193 aa12.89□□□□□ -0.35
MAP1LC3B-208ENST00000570189 RCVRNP35243 200 aa12.89□□□□□ -0.35
MAP1LC3B-208ENST00000570189 RORCP51449 518 aa12.89□□□□□ -0.35
MAP1LC3B-208ENST00000570189 HAGHQ16775 308 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms